RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 MAP3K12Q12852 859 aa15.15■□□□□ 0.02
HLCS-201ENST00000336648 DDX12PQ92771 950 aa15.15■□□□□ 0.02
HLCS-201ENST00000336648 IQCA1Q86XH1 822 aa15.14■□□□□ 0.01
HLCS-201ENST00000336648 CCDC12Q8WUD4 166 aaPredicted RBP15.14■□□□□ 0.01
HLCS-201ENST00000336648 FEZ1Q99689 392 aa15.14■□□□□ 0.01
HLCS-201ENST00000336648 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.14■□□□□ 0.01
HLCS-201ENST00000336648 AMPD3Q01432 767 aa15.14■□□□□ 0.01
HLCS-201ENST00000336648 HOOK3Q86VS8 718 aa15.14■□□□□ 0.01
HLCS-201ENST00000336648 FAM114A1Q8IWE2 563 aa15.14■□□□□ 0.01
HLCS-201ENST00000336648 TMEM57Q8N5G2 664 aa15.14■□□□□ 0.01
HLCS-201ENST00000336648 ALS2CR12Q96Q35 445 aa15.14■□□□□ 0.01
HLCS-201ENST00000336648 TROQ12816 1431 aaPredicted RBP15.14■□□□□ 0.01
HLCS-201ENST00000336648 LRRC27Q9C0I9 530 aa15.14■□□□□ 0.01
HLCS-201ENST00000336648 CCDC113Q9H0I3 377 aa15.14■□□□□ 0.01
HLCS-201ENST00000336648 NAPBQ9H115 298 aa15.14■□□□□ 0.01
HLCS-201ENST00000336648 KANK3Q6NY19 840 aa15.14■□□□□ 0.01
HLCS-201ENST00000336648 IFFO1Q0D2I5 559 aa15.13■□□□□ 0.01
HLCS-201ENST00000336648 CUL5Q93034 780 aa15.13■□□□□ 0.01
HLCS-201ENST00000336648 LIMCH1Q9UPQ0 1083 aa15.13■□□□□ 0.01
HLCS-201ENST00000336648 A0A087WZG4 1122 aa15.13■□□□□ 0.01
HLCS-201ENST00000336648 USP5P45974 858 aa15.13■□□□□ 0.01
HLCS-201ENST00000336648 STXBP4Q6ZWJ1 553 aa15.13■□□□□ 0.01
HLCS-201ENST00000336648 UVSSAQ2YD98 709 aa15.13■□□□□ 0.01
HLCS-201ENST00000336648 CFTRP13569 1480 aa15.13■□□□□ 0.01
HLCS-201ENST00000336648 GTF2A1P52655 376 aaPredicted RBP15.12■□□□□ 0.01
HLCS-201ENST00000336648 DAAM2Q86T65 1068 aa15.12■□□□□ 0.01
HLCS-201ENST00000336648 MKNK2Q9HBH9 465 aa15.12■□□□□ 0.01
HLCS-201ENST00000336648 POLR3DP05423 398 aaPredicted RBP15.12■□□□□ 0.01
HLCS-201ENST00000336648 CCDC175P0C221 793 aa15.12■□□□□ 0.01
HLCS-201ENST00000336648 DUSP27Q5VZP5 1158 aa15.12■□□□□ 0.01
HLCS-201ENST00000336648 PRPF40BQ6NWY9 871 aaKnown RBP15.12■□□□□ 0.01
HLCS-201ENST00000336648 CCDC61Q9Y6R9 512 aa15.12■□□□□ 0.01
HLCS-201ENST00000336648 WDHD1O75717 1129 aaPredicted RBP15.12■□□□□ 0.01
HLCS-201ENST00000336648 EHBP1Q8NDI1 1231 aa15.12■□□□□ 0.01
HLCS-201ENST00000336648 DDX23Q9BUQ8 820 aaKnown RBP15.12■□□□□ 0.01
HLCS-201ENST00000336648 CLIP2Q9UDT6 1046 aa15.12■□□□□ 0.01
HLCS-201ENST00000336648 CCDC141Q6ZP82 1450 aa15.12■□□□□ 0.01
HLCS-201ENST00000336648 POLR3GO15318 223 aaPredicted RBP15.12■□□□□ 0.01
HLCS-201ENST00000336648 GSTTP1A0A1W2PQM5 241 aa15.11■□□□□ 0.01
HLCS-201ENST00000336648 BAG4O95429 457 aaKnown RBP15.11■□□□□ 0.01
HLCS-201ENST00000336648 SSRP1Q08945 709 aaKnown RBP15.11■□□□□ 0.01
HLCS-201ENST00000336648 C6orf163Q5TEZ5 329 aa15.11■□□□□ 0.01
HLCS-201ENST00000336648 PHF23Q9BUL5 403 aaPredicted RBP15.11■□□□□ 0.01
HLCS-201ENST00000336648 SLC12A7Q9Y666 1083 aa15.11■□□□□ 0.01
HLCS-201ENST00000336648 URI1O94763 535 aaPredicted RBP15.11■□□□□ 0.01
HLCS-201ENST00000336648 NSD3Q9BZ95 1437 aa15.11■□□□□ 0.01
HLCS-201ENST00000336648 SLC5A1P13866 664 aa15.11■□□□□ 0.01
HLCS-201ENST00000336648 HECW1Q76N89 1606 aa15.11■□□□□ 0.01
HLCS-201ENST00000336648 PTPRCP08575 1304 aa15.11■□□□□ 0.01
HLCS-201ENST00000336648 TTC21AQ8NDW8 1320 aa15.11■□□□□ 0.01
HLCS-201ENST00000336648 NUTM1Q86Y26 1132 aa15.11■□□□□ 0.01
HLCS-201ENST00000336648 STX1AQ16623 288 aa15.11■□□□□ 0.01
HLCS-201ENST00000336648 CCDC194A0A1B0GVG4 234 aa15.1■□□□□ 0.01
HLCS-201ENST00000336648 TAF7Q15545 349 aaPredicted RBP15.1■□□□□ 0.01
HLCS-201ENST00000336648 CLGNO14967 610 aa15.1■□□□□ 0.01
HLCS-201ENST00000336648 TNNT1P13805 278 aa15.1■□□□□ 0.01
HLCS-201ENST00000336648 CRACR2BQ8N4Y2 399 aaPredicted RBP15.1■□□□□ 0.01
HLCS-201ENST00000336648 PRG4Q92954 1404 aaPredicted RBP15.1■□□□□ 0.01
HLCS-201ENST00000336648 SPECC1LQ69YQ0 1117 aa15.1■□□□□ 0.01
HLCS-201ENST00000336648 TTF1Q15361 905 aaPredicted RBP15.1■□□□□ 0.01
HLCS-201ENST00000336648 IFI16Q16666 785 aaKnown RBP15.1■□□□□ 0.01
HLCS-201ENST00000336648 CNNM3Q8NE01 707 aa15.1■□□□□ 0.01
HLCS-201ENST00000336648 NKTRP30414 1462 aaKnown RBP15.09■□□□□ 0.01
HLCS-201ENST00000336648 ZNF213O14771 459 aa15.09■□□□□ 0.01
HLCS-201ENST00000336648 CCDC178Q5BJE1 867 aa15.09■□□□□ 0.01
HLCS-201ENST00000336648 ABCF2Q9UG63 623 aa15.09■□□□□ 0.01
HLCS-201ENST00000336648 GOLIM4O00461 696 aa15.09■□□□□ 0.01
HLCS-201ENST00000336648 NBPF8Q3BBV2 869 aa15.09■□□□□ 0.01
HLCS-201ENST00000336648 ZNF444Q8N0Y2 327 aaPredicted RBP15.09■□□□□ 0.01
HLCS-201ENST00000336648 CAMK4Q16566 473 aa15.09■□□□□ 0.01
HLCS-201ENST00000336648 DNAAF4Q8WXU2 420 aa15.09■□□□□ 0.01
HLCS-201ENST00000336648 NUP88Q99567 741 aaPredicted RBP15.09■□□□□ 0.01
HLCS-201ENST00000336648 HYPKQ9NX55 129 aa15.09■□□□□ 0.01
HLCS-201ENST00000336648 MPNDQ8N594 471 aa15.09■□□□□ 0.01
HLCS-201ENST00000336648 EVI5LQ96CN4 794 aa15.09■□□□□ 0.01
HLCS-201ENST00000336648 EXOC6BQ9Y2D4 811 aa15.09■□□□□ 0.01
HLCS-201ENST00000336648 GTF2F1P35269 517 aaKnown RBP eCLIP15.09■□□□□ 0.01
HLCS-201ENST00000336648 SEPT6Q14141 434 aa15.09■□□□□ 0.01
HLCS-201ENST00000336648 BMS1Q14692 1282 aaKnown RBP15.09■□□□□ 0.01
HLCS-201ENST00000336648 KIF5BP33176 963 aa15.08■□□□□ 0.01
HLCS-201ENST00000336648 CATIPQ7Z7H3 387 aa15.08■□□□□ 0.01
HLCS-201ENST00000336648 FERMT1Q9BQL6 677 aa15.08■□□□□ 0.01
HLCS-201ENST00000336648 HMG20BQ9P0W2 317 aa15.08■□□□□ 0.01
HLCS-201ENST00000336648 CALML4Q96GE6 196 aa15.08■□□□□ 0
HLCS-201ENST00000336648 TRERF1Q96PN7 1200 aa15.08■□□□□ 0
HLCS-201ENST00000336648 AQRO60306 1485 aaKnown RBP eCLIP15.08■□□□□ 0
HLCS-201ENST00000336648 CCDC172P0C7W6 258 aa15.08■□□□□ 0
HLCS-201ENST00000336648 IFIT5Q13325 482 aaKnown RBP15.08■□□□□ 0
HLCS-201ENST00000336648 UBE4AQ14139 1066 aa15.08■□□□□ 0
HLCS-201ENST00000336648 MNAT1P51948 309 aa15.08■□□□□ 0
HLCS-201ENST00000336648 BBXQ8WY36 941 aaPredicted RBP15.08■□□□□ 0
HLCS-201ENST00000336648 DZIP1Q86YF9 867 aaKnown RBP15.08■□□□□ 0
HLCS-201ENST00000336648 FERMT3Q86UX7 667 aa15.07■□□□□ 0
HLCS-201ENST00000336648 NUDT16Q96DE0 195 aaKnown RBP15.07■□□□□ 0
HLCS-201ENST00000336648 TCP11L1Q9NUJ3 509 aa15.07■□□□□ 0
HLCS-201ENST00000336648 GOLGA8AA7E2F4 631 aa15.07■□□□□ 0
HLCS-201ENST00000336648 GOLGA8BA8MQT2 603 aa15.07■□□□□ 0
HLCS-201ENST00000336648 TUBB4AP04350 444 aa15.07■□□□□ 0
HLCS-201ENST00000336648 SMARCC1Q92922 1105 aaPredicted RBP15.07■□□□□ 0
HLCS-201ENST00000336648 NCAPD3P42695 1498 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms