RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 SRGAP3O43295 1099 aa21.64■■□□□ 1.06
IFFO1-201ENST00000336604 PRIM1P49642 420 aaKnown RBP21.64■■□□□ 1.06
IFFO1-201ENST00000336604 PPP1R9BQ96SB3 815 aa21.64■■□□□ 1.06
IFFO1-201ENST00000336604 ZBTB7CA1YPR0 619 aa21.64■■□□□ 1.05
IFFO1-201ENST00000336604 CUL4AQ13619 759 aa21.64■■□□□ 1.05
IFFO1-201ENST00000336604 ANP32BQ92688 251 aaKnown RBP21.64■■□□□ 1.05
IFFO1-201ENST00000336604 CEMIPQ8WUJ3 1361 aa21.64■■□□□ 1.05
IFFO1-201ENST00000336604 KCNQ3O43525 872 aa21.63■■□□□ 1.05
IFFO1-201ENST00000336604 ANXA1P04083 346 aa21.63■■□□□ 1.05
IFFO1-201ENST00000336604 EIF4A1P60842 406 aaKnown RBP21.63■■□□□ 1.05
IFFO1-201ENST00000336604 RHPN1Q8TCX5 695 aa21.63■■□□□ 1.05
IFFO1-201ENST00000336604 RBSNQ9H1K0 784 aa21.63■■□□□ 1.05
IFFO1-201ENST00000336604 PI4KAP2A4QPH2 592 aa21.63■■□□□ 1.05
IFFO1-201ENST00000336604 KIAA1211Q6ZU35 1233 aa21.63■■□□□ 1.05
IFFO1-201ENST00000336604 PI4KAP1Q8N8J0 262 aa21.63■■□□□ 1.05
IFFO1-201ENST00000336604 TMEM63CQ9P1W3 806 aa21.63■■□□□ 1.05
IFFO1-201ENST00000336604 PHF8Q9UPP1 1060 aa21.63■■□□□ 1.05
IFFO1-201ENST00000336604 POLA2Q14181 598 aa21.62■■□□□ 1.05
IFFO1-201ENST00000336604 AOX1Q06278 1338 aa21.62■■□□□ 1.05
IFFO1-201ENST00000336604 BRD1O95696 1058 aa21.62■■□□□ 1.05
IFFO1-201ENST00000336604 PI4K2BQ8TCG2 481 aa21.62■■□□□ 1.05
IFFO1-201ENST00000336604 IP6K1Q92551 441 aa21.62■■□□□ 1.05
IFFO1-201ENST00000336604 CACNA1FO60840 1977 aa21.61■■□□□ 1.05
IFFO1-201ENST00000336604 RAB11FIP3O75154 756 aa21.6■■□□□ 1.05
IFFO1-201ENST00000336604 BEND3Q5T5X7 828 aa21.6■■□□□ 1.05
IFFO1-201ENST00000336604 DNAAF4Q8WXU2 420 aa21.6■■□□□ 1.05
IFFO1-201ENST00000336604 TPM2P07951 284 aa21.59■■□□□ 1.05
IFFO1-201ENST00000336604 FOXD4L6Q3SYB3 417 aaPredicted RBP21.59■■□□□ 1.05
IFFO1-201ENST00000336604 FOXD4L3Q6VB84 417 aaPredicted RBP21.59■■□□□ 1.05
IFFO1-201ENST00000336604 LRRC59Q96AG4 307 aaKnown RBP21.59■■□□□ 1.05
IFFO1-201ENST00000336604 INTS4Q96HW7 963 aaKnown RBP21.59■■□□□ 1.05
IFFO1-201ENST00000336604 SYCE3A1L190 88 aa21.59■■□□□ 1.05
IFFO1-201ENST00000336604 PLEKHG5O94827 1062 aa21.59■■□□□ 1.05
IFFO1-201ENST00000336604 HSPA4P34932 840 aa21.59■■□□□ 1.05
IFFO1-201ENST00000336604 N4BP2Q86UW6 1770 aaPredicted RBP21.58■■□□□ 1.05
IFFO1-201ENST00000336604 MPRIPQ6WCQ1 1025 aa21.58■■□□□ 1.04
IFFO1-201ENST00000336604 KIF1BPQ96EK5 621 aa21.58■■□□□ 1.04
IFFO1-201ENST00000336604 IL17RAQ96F46 866 aa21.57■■□□□ 1.04
IFFO1-201ENST00000336604 SETD1BQ9UPS6 1966 aaKnown RBP21.57■■□□□ 1.04
IFFO1-201ENST00000336604 RBM10P98175 930 aaKnown RBP21.56■■□□□ 1.04
IFFO1-201ENST00000336604 TEFQ10587 303 aa21.56■■□□□ 1.04
IFFO1-201ENST00000336604 BTBD11A6QL63 1104 aa21.56■■□□□ 1.04
IFFO1-201ENST00000336604 SGSM2O43147 1006 aa21.56■■□□□ 1.04
IFFO1-201ENST00000336604 LTN1O94822 1766 aa21.56■■□□□ 1.04
IFFO1-201ENST00000336604 ZNF530Q6P9A1 599 aaPredicted RBP21.55■■□□□ 1.04
IFFO1-201ENST00000336604 USP54Q70EL1 1684 aa21.55■■□□□ 1.04
IFFO1-201ENST00000336604 RAD50Q92878 1312 aa21.55■■□□□ 1.04
IFFO1-201ENST00000336604 ADCY9O60503 1353 aa21.55■■□□□ 1.04
IFFO1-201ENST00000336604 PSME1Q06323 249 aa21.54■■□□□ 1.04
IFFO1-201ENST00000336604 LRSAM1Q6UWE0 723 aa21.54■■□□□ 1.04
IFFO1-201ENST00000336604 ZSCAN30Q86W11 494 aa21.54■■□□□ 1.04
IFFO1-201ENST00000336604 GDPD2Q9HCC8 539 aa21.54■■□□□ 1.04
IFFO1-201ENST00000336604 FER1L4A9Z1Z3 1794 aa21.54■■□□□ 1.04
IFFO1-201ENST00000336604 HOXB7P09629 217 aa21.54■■□□□ 1.04
IFFO1-201ENST00000336604 ESCO1Q5FWF5 840 aa21.54■■□□□ 1.04
IFFO1-201ENST00000336604 CWC27Q6UX04 472 aaKnown RBP21.54■■□□□ 1.04
IFFO1-201ENST00000336604 PDCL3Q9H2J4 239 aa21.54■■□□□ 1.04
IFFO1-201ENST00000336604 MED1Q15648 1581 aaPredicted RBP21.53■■□□□ 1.04
IFFO1-201ENST00000336604 NFAT5O94916 1531 aa21.53■■□□□ 1.04
IFFO1-201ENST00000336604 MBD3O95983 291 aa21.53■■□□□ 1.04
IFFO1-201ENST00000336604 RASEFQ8IZ41 740 aa21.53■■□□□ 1.04
IFFO1-201ENST00000336604 CNTROBQ8N137 903 aa21.53■■□□□ 1.04
IFFO1-201ENST00000336604 LARP6Q9BRS8 491 aaKnown RBP21.53■■□□□ 1.04
IFFO1-201ENST00000336604 SPG7Q9UQ90 795 aa21.53■■□□□ 1.04
IFFO1-201ENST00000336604 SNX14Q9Y5W7 946 aa21.53■■□□□ 1.04
IFFO1-201ENST00000336604 OS9Q13438 667 aaPredicted RBP21.52■■□□□ 1.04
IFFO1-201ENST00000336604 LSG1Q9H089 658 aaKnown RBP21.52■■□□□ 1.04
IFFO1-201ENST00000336604 EPB41L2O43491 1005 aaKnown RBP21.52■■□□□ 1.03
IFFO1-201ENST00000336604 MSNP26038 577 aaKnown RBP21.52■■□□□ 1.03
IFFO1-201ENST00000336604 PROSER3Q2NL68 480 aa21.52■■□□□ 1.03
IFFO1-201ENST00000336604 AKAP4Q5JQC9 854 aa21.52■■□□□ 1.03
IFFO1-201ENST00000336604 XPCQ01831 940 aaPredicted RBP21.5■■□□□ 1.03
IFFO1-201ENST00000336604 RNF214Q8ND24 703 aa21.5■■□□□ 1.03
IFFO1-201ENST00000336604 PDLIM2Q96JY6 352 aa21.5■■□□□ 1.03
IFFO1-201ENST00000336604 PRAMEF22A3QJZ6 481 aa21.5■■□□□ 1.03
IFFO1-201ENST00000336604 DBF4Q9UBU7 674 aaPredicted RBP21.5■■□□□ 1.03
IFFO1-201ENST00000336604 MAP3K2Q9Y2U5 619 aa21.5■■□□□ 1.03
IFFO1-201ENST00000336604 GADD45BO75293 160 aaPredicted RBP21.49■■□□□ 1.03
IFFO1-201ENST00000336604 KCNH5Q8NCM2 988 aa21.49■■□□□ 1.03
IFFO1-201ENST00000336604 CPA1P15085 419 aa21.49■■□□□ 1.03
IFFO1-201ENST00000336604 CWF19L2Q2TBE0 894 aaKnown RBP21.49■■□□□ 1.03
IFFO1-201ENST00000336604 PLEKHO1Q53GL0 409 aaPredicted RBP21.49■■□□□ 1.03
IFFO1-201ENST00000336604 HSP90AB4PQ58FF6 505 aa21.49■■□□□ 1.03
IFFO1-201ENST00000336604 TTC14Q96N46 770 aa21.49■■□□□ 1.03
IFFO1-201ENST00000336604 PA2G4Q9UQ80 394 aaKnown RBP21.49■■□□□ 1.03
IFFO1-201ENST00000336604 AK2P54819 239 aa21.48■■□□□ 1.03
IFFO1-201ENST00000336604 C9orf78Q9NZ63 289 aaPredicted RBP21.48■■□□□ 1.03
IFFO1-201ENST00000336604 WDR33Q9C0J8 1336 aaKnown RBP21.48■■□□□ 1.03
IFFO1-201ENST00000336604 PXDNQ92626 1479 aa21.48■■□□□ 1.03
IFFO1-201ENST00000336604 KDM3BQ7LBC6 1761 aa21.48■■□□□ 1.03
IFFO1-201ENST00000336604 GLRX3O76003 335 aaKnown RBP21.47■■□□□ 1.03
IFFO1-201ENST00000336604 RGPD2P0DJD1 1756 aa21.47■■□□□ 1.03
IFFO1-201ENST00000336604 RNMTO43148 476 aaKnown RBP21.47■■□□□ 1.03
IFFO1-201ENST00000336604 C1orf141Q5JVX7 400 aa21.47■■□□□ 1.03
IFFO1-201ENST00000336604 RUFY3Q7L099 469 aa21.47■■□□□ 1.03
IFFO1-201ENST00000336604 USP48Q86UV5 1035 aa21.47■■□□□ 1.03
IFFO1-201ENST00000336604 CLASRPQ8N2M8 674 aaKnown RBP21.47■■□□□ 1.03
IFFO1-201ENST00000336604 ARID3AQ99856 593 aa21.47■■□□□ 1.03
IFFO1-201ENST00000336604 CHMP4AQ9BY43 222 aa21.47■■□□□ 1.03
IFFO1-201ENST00000336604 FAM13BQ9NYF5 915 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms