RNA–Protein interactions for RNA: ENST00000336119.7

NLRP3-201, Transcript of NLR family pyrin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP3, Length 4,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-201ENST00000336119 HOXB7P09629 217 aa11.14□□□□□ -0.63
NLRP3-201ENST00000336119 LRRC59Q96AG4 307 aaKnown RBP11.14□□□□□ -0.63
NLRP3-201ENST00000336119 PRDM11Q9NQV5 511 aa11.14□□□□□ -0.63
NLRP3-201ENST00000336119 PTCH1Q13635 1447 aa11.14□□□□□ -0.63
NLRP3-201ENST00000336119 H3BQV1 296 aa11.14□□□□□ -0.63
NLRP3-201ENST00000336119 IFFO2Q5TF58 517 aa11.14□□□□□ -0.63
NLRP3-201ENST00000336119 TOM1L2Q6ZVM7 507 aa11.14□□□□□ -0.63
NLRP3-201ENST00000336119 ESYT1Q9BSJ8 1104 aa11.14□□□□□ -0.63
NLRP3-201ENST00000336119 IGSF1Q8N6C5 1336 aa11.14□□□□□ -0.63
NLRP3-201ENST00000336119 NUTM2BA6NNL0 878 aaPredicted RBP11.13□□□□□ -0.63
NLRP3-201ENST00000336119 NUTM2EB1AL46 878 aaPredicted RBP11.13□□□□□ -0.63
NLRP3-201ENST00000336119 NUTM2AQ8IVF1 878 aaPredicted RBP11.13□□□□□ -0.63
NLRP3-201ENST00000336119 UPF3BQ9BZI7 483 aaKnown RBP11.13□□□□□ -0.63
NLRP3-201ENST00000336119 TMEM131LA2VDJ0 1609 aa11.13□□□□□ -0.63
NLRP3-201ENST00000336119 RTL1A6NKG5 1358 aa11.13□□□□□ -0.63
NLRP3-201ENST00000336119 OTUD7AQ8TE49 926 aaPredicted RBP11.13□□□□□ -0.63
NLRP3-201ENST00000336119 LRRC7Q96NW7 1537 aa11.13□□□□□ -0.63
NLRP3-201ENST00000336119 USP19O94966 1318 aa11.13□□□□□ -0.63
NLRP3-201ENST00000336119 IFNL2Q8IZJ0 200 aa11.13□□□□□ -0.63
NLRP3-201ENST00000336119 ECHDC1Q9NTX5 307 aa11.13□□□□□ -0.63
NLRP3-201ENST00000336119 USP32Q8NFA0 1604 aa11.13□□□□□ -0.63
NLRP3-201ENST00000336119 ANAPC15P60006 121 aa11.13□□□□□ -0.63
NLRP3-201ENST00000336119 KSR2Q6VAB6 950 aa11.13□□□□□ -0.63
NLRP3-201ENST00000336119 BAG4O95429 457 aaKnown RBP11.12□□□□□ -0.63
NLRP3-201ENST00000336119 IL17REQ8NFR9 667 aa11.12□□□□□ -0.63
NLRP3-201ENST00000336119 ZSCAN31Q96LW9 406 aaPredicted RBP11.12□□□□□ -0.63
NLRP3-201ENST00000336119 PHAXQ9H814 394 aaKnown RBP11.12□□□□□ -0.63
NLRP3-201ENST00000336119 ARHGEF28Q8N1W1 1705 aaKnown RBP11.12□□□□□ -0.63
NLRP3-201ENST00000336119 PDCP20941 246 aa11.12□□□□□ -0.63
NLRP3-201ENST00000336119 RAB3GAP1Q15042 981 aa11.12□□□□□ -0.63
NLRP3-201ENST00000336119 TAOK2Q9UL54 1235 aa11.12□□□□□ -0.63
NLRP3-201ENST00000336119 RNMTO43148 476 aaKnown RBP11.11□□□□□ -0.63
NLRP3-201ENST00000336119 ANKRD1Q15327 319 aa11.11□□□□□ -0.63
NLRP3-201ENST00000336119 SIRT2Q8IXJ6 389 aa11.11□□□□□ -0.63
NLRP3-201ENST00000336119 DRC7Q8IY82 874 aa11.11□□□□□ -0.63
NLRP3-201ENST00000336119 MYD88Q99836 296 aa11.11□□□□□ -0.63
NLRP3-201ENST00000336119 NBPF6Q5VWK0 638 aa11.11□□□□□ -0.63
NLRP3-201ENST00000336119 NBPF4Q96M43 638 aa11.11□□□□□ -0.63
NLRP3-201ENST00000336119 JAKMIP1Q96N16 626 aaKnown RBP11.11□□□□□ -0.63
NLRP3-201ENST00000336119 FMNL2Q96PY5 1086 aa11.11□□□□□ -0.63
NLRP3-201ENST00000336119 DNAJC2Q99543 621 aaKnown RBP11.11□□□□□ -0.63
NLRP3-201ENST00000336119 PDRG1Q9NUG6 133 aa11.11□□□□□ -0.63
NLRP3-201ENST00000336119 GOLGA6L6A8MZA4 724 aa11.1□□□□□ -0.63
NLRP3-201ENST00000336119 CCDC173Q0VFZ6 552 aa11.1□□□□□ -0.63
NLRP3-201ENST00000336119 TMEM94Q12767 1356 aa11.1□□□□□ -0.63
NLRP3-201ENST00000336119 GNL2Q13823 731 aaKnown RBP11.1□□□□□ -0.63
NLRP3-201ENST00000336119 LGR6Q9HBX8 967 aa11.1□□□□□ -0.63
NLRP3-201ENST00000336119 GSPT1P15170 499 aaKnown RBP11.1□□□□□ -0.63
NLRP3-201ENST00000336119 LINS1Q8NG48 757 aa11.1□□□□□ -0.63
NLRP3-201ENST00000336119 DDX54Q8TDD1 881 aaKnown RBP11.1□□□□□ -0.63
NLRP3-201ENST00000336119 EVI5LQ96CN4 794 aa11.1□□□□□ -0.63
NLRP3-201ENST00000336119 BLOC1S2Q6QNY1 142 aa11.09□□□□□ -0.63
NLRP3-201ENST00000336119 STRN4Q9NRL3 753 aa11.09□□□□□ -0.63
NLRP3-201ENST00000336119 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.09□□□□□ -0.63
NLRP3-201ENST00000336119 CHMLP26374 656 aa11.09□□□□□ -0.63
NLRP3-201ENST00000336119 TMX3Q96JJ7 454 aa11.09□□□□□ -0.63
NLRP3-201ENST00000336119 ORAI2Q96SN7 254 aa11.09□□□□□ -0.63
NLRP3-201ENST00000336119 LETM1O95202 739 aaPredicted RBP11.09□□□□□ -0.63
NLRP3-201ENST00000336119 SNRPA1P09661 255 aaKnown RBP11.09□□□□□ -0.63
NLRP3-201ENST00000336119 CASTP20810 708 aaKnown RBP11.09□□□□□ -0.63
NLRP3-201ENST00000336119 CCDC8Q9H0W5 538 aaPredicted RBP11.09□□□□□ -0.63
NLRP3-201ENST00000336119 SLAIN2Q9P270 581 aa11.09□□□□□ -0.63
NLRP3-201ENST00000336119 GRM8O00222 908 aa11.09□□□□□ -0.63
NLRP3-201ENST00000336119 NPHP1O15259 732 aa11.09□□□□□ -0.63
NLRP3-201ENST00000336119 PDIA4P13667 645 aaKnown RBP11.09□□□□□ -0.63
NLRP3-201ENST00000336119 EIF4A1P60842 406 aaKnown RBP11.09□□□□□ -0.63
NLRP3-201ENST00000336119 KLHL40Q2TBA0 621 aa11.09□□□□□ -0.63
NLRP3-201ENST00000336119 BOLA2Q9H3K6 86 aa11.09□□□□□ -0.63
NLRP3-201ENST00000336119 SPATA31D1Q6ZQQ2 1576 aa11.09□□□□□ -0.63
NLRP3-201ENST00000336119 CEP170BQ9Y4F5 1589 aaPredicted RBP11.09□□□□□ -0.63
NLRP3-201ENST00000336119 IFT172Q9UG01 1749 aa11.08□□□□□ -0.64
NLRP3-201ENST00000336119 PNMA6EA0A0J9YXQ4 647 aa11.08□□□□□ -0.64
NLRP3-201ENST00000336119 LIMCH1Q9UPQ0 1083 aa11.08□□□□□ -0.64
NLRP3-201ENST00000336119 PRPF40BQ6NWY9 871 aaKnown RBP11.08□□□□□ -0.64
NLRP3-201ENST00000336119 CD163L1Q9NR16 1453 aa11.08□□□□□ -0.64
NLRP3-201ENST00000336119 NPHP3Q7Z494 1330 aa11.08□□□□□ -0.64
NLRP3-201ENST00000336119 CDC42BPGQ6DT37 1551 aa11.08□□□□□ -0.64
NLRP3-201ENST00000336119 CHAF1AQ13111 956 aaPredicted RBP11.08□□□□□ -0.64
NLRP3-201ENST00000336119 KRT32Q14532 448 aa11.08□□□□□ -0.64
NLRP3-201ENST00000336119 AOX1Q06278 1338 aa11.08□□□□□ -0.64
NLRP3-201ENST00000336119 ANKARQ7Z5J8 1434 aa11.07□□□□□ -0.64
NLRP3-201ENST00000336119 NRDCO43847 1150 aa11.07□□□□□ -0.64
NLRP3-201ENST00000336119 KIF6Q6ZMV9 814 aa11.07□□□□□ -0.64
NLRP3-201ENST00000336119 ANKRD13DQ6ZTN6 518 aa11.07□□□□□ -0.64
NLRP3-201ENST00000336119 SYTL4Q96C24 671 aaPredicted RBP11.07□□□□□ -0.64
NLRP3-201ENST00000336119 TTC41PQ6P2S7 1318 aa11.07□□□□□ -0.64
NLRP3-201ENST00000336119 TECPR2O15040 1411 aa11.07□□□□□ -0.64
NLRP3-201ENST00000336119 USP44Q9H0E7 712 aa11.07□□□□□ -0.64
NLRP3-201ENST00000336119 TSPY26PQ9H489 355 aa11.07□□□□□ -0.64
NLRP3-201ENST00000336119 DDX21Q9NR30 783 aaKnown RBP eCLIP11.07□□□□□ -0.64
NLRP3-201ENST00000336119 COL3A1P02461 1466 aaPredicted RBP11.07□□□□□ -0.64
NLRP3-201ENST00000336119 FIBPO43427 364 aa11.07□□□□□ -0.64
NLRP3-201ENST00000336119 SLC39A6Q13433 755 aa11.07□□□□□ -0.64
NLRP3-201ENST00000336119 SF3A1Q15459 793 aaKnown RBP11.07□□□□□ -0.64
NLRP3-201ENST00000336119 ANTXR1Q9H6X2 564 aa11.07□□□□□ -0.64
NLRP3-201ENST00000336119 SH2B1Q9NRF2 756 aaPredicted RBP11.07□□□□□ -0.64
NLRP3-201ENST00000336119 USP31Q70CQ4 1352 aa11.07□□□□□ -0.64
NLRP3-201ENST00000336119 A0A087WZG4 1122 aa11.06□□□□□ -0.64
NLRP3-201ENST00000336119 WASHC4Q2M389 1173 aa11.06□□□□□ -0.64
NLRP3-201ENST00000336119 RNF214Q8ND24 703 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms