RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 SMTNL1A8MU46 457 aa18.48■□□□□ 0.55
HDAC5-202ENST00000336057 SETQ01105 290 aaPredicted RBP18.48■□□□□ 0.55
HDAC5-202ENST00000336057 PPFIBP1Q86W92 1011 aa18.48■□□□□ 0.55
HDAC5-202ENST00000336057 WDR7Q9Y4E6 1490 aa18.48■□□□□ 0.55
HDAC5-202ENST00000336057 GCC2Q8IWJ2 1684 aa18.48■□□□□ 0.55
HDAC5-202ENST00000336057 IFIT1P09914 478 aaKnown RBP18.48■□□□□ 0.55
HDAC5-202ENST00000336057 ZSCAN23Q3MJ62 389 aa18.48■□□□□ 0.55
HDAC5-202ENST00000336057 DCTPP1Q9H773 170 aa18.48■□□□□ 0.55
HDAC5-202ENST00000336057 RBM27Q9P2N5 1060 aaKnown RBP18.48■□□□□ 0.55
HDAC5-202ENST00000336057 MAGEC2Q9UBF1 373 aaPredicted RBP18.48■□□□□ 0.55
HDAC5-202ENST00000336057 TCEAL9Q9UHQ7 104 aa18.48■□□□□ 0.55
HDAC5-202ENST00000336057 GJB2P29033 226 aa18.48■□□□□ 0.55
HDAC5-202ENST00000336057 CAGE1Q8TC20 777 aa18.48■□□□□ 0.55
HDAC5-202ENST00000336057 A0A1W2PP64 1363 aa18.47■□□□□ 0.55
HDAC5-202ENST00000336057 TDO2P48775 406 aa18.47■□□□□ 0.55
HDAC5-202ENST00000336057 ERCC4Q92889 916 aaPredicted RBP18.47■□□□□ 0.55
HDAC5-202ENST00000336057 FOXO3O43524 673 aa18.47■□□□□ 0.55
HDAC5-202ENST00000336057 BLMP54132 1417 aaPredicted RBP18.47■□□□□ 0.55
HDAC5-202ENST00000336057 C16orf71Q8IYS4 520 aaPredicted RBP18.47■□□□□ 0.55
HDAC5-202ENST00000336057 OFD1O75665 1012 aa18.46■□□□□ 0.55
HDAC5-202ENST00000336057 ESYT1Q9BSJ8 1104 aa18.46■□□□□ 0.55
HDAC5-202ENST00000336057 UBAC1Q9BSL1 405 aa18.46■□□□□ 0.55
HDAC5-202ENST00000336057 EIF4A2Q14240 407 aaKnown RBP18.46■□□□□ 0.55
HDAC5-202ENST00000336057 PTCD1O75127 700 aaKnown RBP18.46■□□□□ 0.55
HDAC5-202ENST00000336057 ANAPC15P60006 121 aa18.46■□□□□ 0.55
HDAC5-202ENST00000336057 WASF1Q92558 559 aa18.46■□□□□ 0.55
HDAC5-202ENST00000336057 ANO10Q9NW15 660 aa18.46■□□□□ 0.55
HDAC5-202ENST00000336057 MCM5P33992 734 aa18.46■□□□□ 0.55
HDAC5-202ENST00000336057 AIDAQ96BJ3 306 aa18.46■□□□□ 0.55
HDAC5-202ENST00000336057 PHACTR3Q96KR7 559 aa18.46■□□□□ 0.55
HDAC5-202ENST00000336057 NOL7Q9UMY1 257 aaKnown RBP18.46■□□□□ 0.55
HDAC5-202ENST00000336057 MAGI3Q5TCQ9 1506 aa18.46■□□□□ 0.55
HDAC5-202ENST00000336057 TTC21AQ8NDW8 1320 aa18.46■□□□□ 0.55
HDAC5-202ENST00000336057 CEBPAP49715 358 aaPredicted RBP18.45■□□□□ 0.54
HDAC5-202ENST00000336057 METTL24Q5JXM2 366 aa18.45■□□□□ 0.54
HDAC5-202ENST00000336057 ABCA5Q8WWZ7 1642 aa18.45■□□□□ 0.54
HDAC5-202ENST00000336057 ZFYVE9O95405 1425 aa18.45■□□□□ 0.54
HDAC5-202ENST00000336057 A0A087WZG4 1122 aa18.45■□□□□ 0.54
HDAC5-202ENST00000336057 EPS15P42566 896 aa18.45■□□□□ 0.54
HDAC5-202ENST00000336057 UBE2HP62256 183 aa18.45■□□□□ 0.54
HDAC5-202ENST00000336057 ATP8B2P98198 1209 aa18.45■□□□□ 0.54
HDAC5-202ENST00000336057 DDX19AQ9NUU7 478 aaKnown RBP18.45■□□□□ 0.54
HDAC5-202ENST00000336057 CKAP2LQ8IYA6 745 aa18.44■□□□□ 0.54
HDAC5-202ENST00000336057 ZRANB1Q9UGI0 708 aa18.44■□□□□ 0.54
HDAC5-202ENST00000336057 ABCC10Q5T3U5 1492 aa18.44■□□□□ 0.54
HDAC5-202ENST00000336057 STARD3NLO95772 234 aa18.44■□□□□ 0.54
HDAC5-202ENST00000336057 LRSAM1Q6UWE0 723 aa18.44■□□□□ 0.54
HDAC5-202ENST00000336057 CDK5RAP3Q96JB5 506 aa18.44■□□□□ 0.54
HDAC5-202ENST00000336057 RAB3GAP1Q15042 981 aa18.43■□□□□ 0.54
HDAC5-202ENST00000336057 MAST1Q9Y2H9 1570 aa18.43■□□□□ 0.54
HDAC5-202ENST00000336057 CEP85Q6P2H3 762 aa18.43■□□□□ 0.54
HDAC5-202ENST00000336057 C8orf76Q96K31 380 aa18.43■□□□□ 0.54
HDAC5-202ENST00000336057 PANK2Q9BZ23 570 aa18.43■□□□□ 0.54
HDAC5-202ENST00000336057 CCDC66A2RUB6 948 aa18.43■□□□□ 0.54
HDAC5-202ENST00000336057 FAM177A1Q8N128 213 aaPredicted RBP18.43■□□□□ 0.54
HDAC5-202ENST00000336057 CTAGE5O15320 804 aa18.43■□□□□ 0.54
HDAC5-202ENST00000336057 CTDP1Q9Y5B0 961 aaPredicted RBP18.43■□□□□ 0.54
HDAC5-202ENST00000336057 ANXA1P04083 346 aa18.42■□□□□ 0.54
HDAC5-202ENST00000336057 ZNHIT6Q9NWK9 470 aaKnown RBP18.42■□□□□ 0.54
HDAC5-202ENST00000336057 LRP2BPQ9P2M1 347 aa18.42■□□□□ 0.54
HDAC5-202ENST00000336057 TFIP11Q9UBB9 837 aaKnown RBP18.42■□□□□ 0.54
HDAC5-202ENST00000336057 DMRT2Q9Y5R5 561 aa18.42■□□□□ 0.54
HDAC5-202ENST00000336057 UVSSAQ2YD98 709 aa18.42■□□□□ 0.54
HDAC5-202ENST00000336057 STIM1Q13586 685 aa18.42■□□□□ 0.54
HDAC5-202ENST00000336057 PLEKHM2Q8IWE5 1019 aa18.42■□□□□ 0.54
HDAC5-202ENST00000336057 EIF4G3O43432 1585 aaKnown RBP18.42■□□□□ 0.54
HDAC5-202ENST00000336057 CFAP100Q494V2 611 aa18.42■□□□□ 0.54
HDAC5-202ENST00000336057 PDCL2Q8N4E4 241 aa18.42■□□□□ 0.54
HDAC5-202ENST00000336057 CCDC43Q96MW1 224 aaKnown RBP18.42■□□□□ 0.54
HDAC5-202ENST00000336057 ADCY5O95622 1261 aa18.41■□□□□ 0.54
HDAC5-202ENST00000336057 ZSCAN22P10073 491 aaPredicted RBP18.41■□□□□ 0.54
HDAC5-202ENST00000336057 SFPQP23246 707 aaKnown RBP eCLIP18.41■□□□□ 0.54
HDAC5-202ENST00000336057 HMG20BQ9P0W2 317 aa18.41■□□□□ 0.54
HDAC5-202ENST00000336057 ZBTB7BO15156 539 aaPredicted RBP18.41■□□□□ 0.54
HDAC5-202ENST00000336057 CLCN1P35523 988 aa18.41■□□□□ 0.54
HDAC5-202ENST00000336057 GUCY1B3Q02153 619 aa18.41■□□□□ 0.54
HDAC5-202ENST00000336057 TNRQ92752 1358 aa18.41■□□□□ 0.54
HDAC5-202ENST00000336057 KIF2AO00139 706 aaPredicted RBP18.41■□□□□ 0.54
HDAC5-202ENST00000336057 NCBP3Q53F19 620 aaKnown RBP18.41■□□□□ 0.54
HDAC5-202ENST00000336057 RAI14Q9P0K7 980 aa18.41■□□□□ 0.54
HDAC5-202ENST00000336057 NPATQ14207 1427 aa18.4■□□□□ 0.54
HDAC5-202ENST00000336057 RIMS2Q9UQ26 1411 aa18.4■□□□□ 0.54
HDAC5-202ENST00000336057 UHRF1BP1LA0JNW5 1464 aa18.4■□□□□ 0.54
HDAC5-202ENST00000336057 PTPN14Q15678 1187 aa18.4■□□□□ 0.54
HDAC5-202ENST00000336057 CHPF2Q9P2E5 772 aa18.4■□□□□ 0.54
HDAC5-202ENST00000336057 CLIP2Q9UDT6 1046 aa18.4■□□□□ 0.54
HDAC5-202ENST00000336057 ABCC1P33527 1531 aa18.4■□□□□ 0.54
HDAC5-202ENST00000336057 PBRM1Q86U86 1689 aa18.39■□□□□ 0.54
HDAC5-202ENST00000336057 IFIT5Q13325 482 aaKnown RBP18.39■□□□□ 0.53
HDAC5-202ENST00000336057 IGHMBP2P38935 993 aaKnown RBP18.39■□□□□ 0.53
HDAC5-202ENST00000336057 MTHFSDQ2M296 383 aaKnown RBP18.39■□□□□ 0.53
HDAC5-202ENST00000336057 CDR1P51861 262 aa18.39■□□□□ 0.53
HDAC5-202ENST00000336057 KRT24Q2M2I5 525 aa18.39■□□□□ 0.53
HDAC5-202ENST00000336057 NEK1Q96PY6 1258 aa18.39■□□□□ 0.53
HDAC5-202ENST00000336057 CWC15Q9P013 229 aaKnown RBP18.39■□□□□ 0.53
HDAC5-202ENST00000336057 CCT2P78371 535 aaKnown RBP18.39■□□□□ 0.53
HDAC5-202ENST00000336057 UBE3BQ7Z3V4 1068 aa18.38■□□□□ 0.53
HDAC5-202ENST00000336057 CEP131Q9UPN4 1083 aa18.38■□□□□ 0.53
HDAC5-202ENST00000336057 NOM1Q5C9Z4 860 aaKnown RBP18.38■□□□□ 0.53
HDAC5-202ENST00000336057 ZNF213O14771 459 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms