RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 FAM208AQ9UK61 1670 aaKnown RBP24.92■■□□□ 1.58
SPNS1-203ENST00000334536 CACNA1FO60840 1977 aa24.92■■□□□ 1.58
SPNS1-203ENST00000334536 SETD1BQ9UPS6 1966 aaKnown RBP24.92■■□□□ 1.58
SPNS1-203ENST00000334536 MARF1Q9Y4F3 1742 aaKnown RBP24.92■■□□□ 1.58
SPNS1-203ENST00000334536 ERC2O15083 957 aa24.91■■□□□ 1.58
SPNS1-203ENST00000334536 SSFA2P28290 1259 aa24.91■■□□□ 1.58
SPNS1-203ENST00000334536 PXDNLA1KZ92 1463 aa24.91■■□□□ 1.58
SPNS1-203ENST00000334536 APBB1O00213 710 aa24.91■■□□□ 1.58
SPNS1-203ENST00000334536 TAF7Q15545 349 aaPredicted RBP24.91■■□□□ 1.58
SPNS1-203ENST00000334536 LRSAM1Q6UWE0 723 aa24.91■■□□□ 1.58
SPNS1-203ENST00000334536 ATP8B2P98198 1209 aa24.9■■□□□ 1.58
SPNS1-203ENST00000334536 PIBF1Q8WXW3 757 aa24.9■■□□□ 1.58
SPNS1-203ENST00000334536 PDCL2Q8N4E4 241 aa24.9■■□□□ 1.58
SPNS1-203ENST00000334536 CWC22Q9HCG8 908 aaKnown RBP24.9■■□□□ 1.58
SPNS1-203ENST00000334536 FOXD4L1Q9NU39 408 aa24.9■■□□□ 1.58
SPNS1-203ENST00000334536 ST18O60284 1047 aa24.89■■□□□ 1.57
SPNS1-203ENST00000334536 CAVIN1Q6NZI2 390 aaKnown RBP24.89■■□□□ 1.57
SPNS1-203ENST00000334536 DNAJC2Q99543 621 aaKnown RBP24.89■■□□□ 1.57
SPNS1-203ENST00000334536 N4BP2Q86UW6 1770 aaPredicted RBP24.88■■□□□ 1.57
SPNS1-203ENST00000334536 CCDC66A2RUB6 948 aa24.88■■□□□ 1.57
SPNS1-203ENST00000334536 FKBP5Q13451 457 aaPredicted RBP24.88■■□□□ 1.57
SPNS1-203ENST00000334536 IL17REQ8NFR9 667 aa24.88■■□□□ 1.57
SPNS1-203ENST00000334536 SALL3Q9BXA9 1300 aa24.88■■□□□ 1.57
SPNS1-203ENST00000334536 KCNA6P17658 529 aa24.88■■□□□ 1.57
SPNS1-203ENST00000334536 PRIM1P49642 420 aaKnown RBP24.88■■□□□ 1.57
SPNS1-203ENST00000334536 DNTTIP2Q5QJE6 756 aaKnown RBP24.88■■□□□ 1.57
SPNS1-203ENST00000334536 LMBRD1Q9NUN5 540 aa24.88■■□□□ 1.57
SPNS1-203ENST00000334536 LRRCC1Q9C099 1032 aa24.87■■□□□ 1.57
SPNS1-203ENST00000334536 ABTB2Q8N961 1025 aa24.86■■□□□ 1.57
SPNS1-203ENST00000334536 ANKRD7Q92527 254 aa24.86■■□□□ 1.57
SPNS1-203ENST00000334536 CGNQ9P2M7 1197 aaKnown RBP24.86■■□□□ 1.57
SPNS1-203ENST00000334536 SRCIN1Q9C0H9 1055 aa24.85■■□□□ 1.57
SPNS1-203ENST00000334536 OGFRQ9NZT2 677 aa24.85■■□□□ 1.57
SPNS1-203ENST00000334536 CHMP4AQ9BY43 222 aa24.85■■□□□ 1.57
SPNS1-203ENST00000334536 SPTLC3Q9NUV7 552 aa24.85■■□□□ 1.57
SPNS1-203ENST00000334536 CYP2E1P05181 493 aaPredicted RBP24.84■■□□□ 1.57
SPNS1-203ENST00000334536 STAP2Q9UGK3 403 aa24.84■■□□□ 1.57
SPNS1-203ENST00000334536 FAM193AP78312 1265 aa24.83■■□□□ 1.57
SPNS1-203ENST00000334536 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.83■■□□□ 1.579e-11■□□□□ 10.8
SPNS1-203ENST00000334536 ZNF771Q7L3S4 317 aaPredicted RBP24.83■■□□□ 1.56
SPNS1-203ENST00000334536 BCL2L12Q9HB09 334 aa24.83■■□□□ 1.56
SPNS1-203ENST00000334536 EXOC6BQ9Y2D4 811 aa24.83■■□□□ 1.56
SPNS1-203ENST00000334536 AOX1Q06278 1338 aa24.82■■□□□ 1.56
SPNS1-203ENST00000334536 DIAPH3Q9NSV4 1193 aa24.82■■□□□ 1.56
SPNS1-203ENST00000334536 MX1P20591 662 aa24.81■■□□□ 1.56
SPNS1-203ENST00000334536 IP6K1Q92551 441 aa24.81■■□□□ 1.56
SPNS1-203ENST00000334536 TSPYL1Q9H0U9 437 aa24.81■■□□□ 1.56
SPNS1-203ENST00000334536 PTMAP06454 111 aaKnown RBP24.81■■□□□ 1.56
SPNS1-203ENST00000334536 NOLC1Q14978 699 aaKnown RBP eCLIP24.81■■□□□ 1.56
SPNS1-203ENST00000334536 NUTM2GQ5VZR2 741 aa24.81■■□□□ 1.56
SPNS1-203ENST00000334536 PHF8Q9UPP1 1060 aa24.81■■□□□ 1.56
SPNS1-203ENST00000334536 CEMIPQ8WUJ3 1361 aa24.8■■□□□ 1.56
SPNS1-203ENST00000334536 SYCP1Q15431 976 aa24.8■■□□□ 1.56
SPNS1-203ENST00000334536 PNMA6EA0A0J9YXQ4 647 aa24.79■■□□□ 1.56
SPNS1-203ENST00000334536 HOXB7P09629 217 aa24.79■■□□□ 1.56
SPNS1-203ENST00000334536 ESYT1Q9BSJ8 1104 aa24.79■■□□□ 1.56
SPNS1-203ENST00000334536 MBD3O95983 291 aa24.79■■□□□ 1.56
SPNS1-203ENST00000334536 MCM2P49736 904 aa24.79■■□□□ 1.56
SPNS1-203ENST00000334536 IRX5P78411 483 aaPredicted RBP24.79■■□□□ 1.56
SPNS1-203ENST00000334536 MCTP1Q6DN14 999 aa24.79■■□□□ 1.56
SPNS1-203ENST00000334536 ANKLE2Q86XL3 938 aa24.79■■□□□ 1.56
SPNS1-203ENST00000334536 TUBGCP6Q96RT7 1819 aa24.79■■□□□ 1.56
SPNS1-203ENST00000334536 MCCP23508 829 aa24.78■■□□□ 1.56
SPNS1-203ENST00000334536 HDGFL1Q5TGJ6 251 aa24.78■■□□□ 1.56
SPNS1-203ENST00000334536 LTV1Q96GA3 475 aaPredicted RBP24.78■■□□□ 1.56
SPNS1-203ENST00000334536 USP44Q9H0E7 712 aa24.78■■□□□ 1.56
SPNS1-203ENST00000334536 LRRFIP2Q9Y608 721 aaKnown RBP24.78■■□□□ 1.56
SPNS1-203ENST00000334536 VGLL3A8MV65 326 aa24.78■■□□□ 1.56
SPNS1-203ENST00000334536 EPB41L2O43491 1005 aaKnown RBP24.78■■□□□ 1.56
SPNS1-203ENST00000334536 UBTFL1P0CB47 393 aaPredicted RBP24.78■■□□□ 1.56
SPNS1-203ENST00000334536 CREBRFQ8IUR6 639 aa24.78■■□□□ 1.56
SPNS1-203ENST00000334536 RAB11FIP3O75154 756 aa24.77■■□□□ 1.56
SPNS1-203ENST00000334536 ANAPC15P60006 121 aa24.77■■□□□ 1.56
SPNS1-203ENST00000334536 UVSSAQ2YD98 709 aa24.77■■□□□ 1.56
SPNS1-203ENST00000334536 MED1Q15648 1581 aaPredicted RBP24.77■■□□□ 1.56
SPNS1-203ENST00000334536 CTIFO43310 598 aaKnown RBP24.76■■□□□ 1.55
SPNS1-203ENST00000334536 TEX2Q8IWB9 1127 aa24.76■■□□□ 1.55
SPNS1-203ENST00000334536 SSH3Q8TE77 659 aa24.76■■□□□ 1.55
SPNS1-203ENST00000334536 NECTIN2Q92692 538 aa24.76■■□□□ 1.55
SPNS1-203ENST00000334536 IL17RAQ96F46 866 aa24.76■■□□□ 1.55
SPNS1-203ENST00000334536 NFAT5O94916 1531 aa24.75■■□□□ 1.55
SPNS1-203ENST00000334536 CHMLP26374 656 aa24.74■■□□□ 1.55
SPNS1-203ENST00000334536 CHAF1AQ13111 956 aaPredicted RBP24.74■■□□□ 1.55
SPNS1-203ENST00000334536 FAM184AQ8NB25 1140 aa24.74■■□□□ 1.55
SPNS1-203ENST00000334536 LTN1O94822 1766 aa24.74■■□□□ 1.55
SPNS1-203ENST00000334536 KCNH5Q8NCM2 988 aa24.74■■□□□ 1.55
SPNS1-203ENST00000334536 TIGD1Q96MW7 591 aa24.74■■□□□ 1.55
SPNS1-203ENST00000334536 ADGRL3Q9HAR2 1447 aa24.74■■□□□ 1.55
SPNS1-203ENST00000334536 CHRM1P11229 460 aaPredicted RBP24.73■■□□□ 1.55
SPNS1-203ENST00000334536 CHD2O14647 1828 aaKnown RBP24.73■■□□□ 1.55
SPNS1-203ENST00000334536 EIF4A1P60842 406 aaKnown RBP24.73■■□□□ 1.55
SPNS1-203ENST00000334536 POLA2Q14181 598 aa24.73■■□□□ 1.55
SPNS1-203ENST00000334536 PAXIP1Q6ZW49 1069 aaPredicted RBP24.73■■□□□ 1.55
SPNS1-203ENST00000334536 C14orf37Q86TY3 774 aa24.72■■□□□ 1.55
SPNS1-203ENST00000334536 PHRF1Q9P1Y6 1649 aaKnown RBP24.72■■□□□ 1.55
SPNS1-203ENST00000334536 KLHL34Q8N239 644 aa24.71■■□□□ 1.55
SPNS1-203ENST00000334536 USHBP1Q8N6Y0 703 aa24.71■■□□□ 1.55
SPNS1-203ENST00000334536 GPT2Q8TD30 523 aa24.71■■□□□ 1.55
SPNS1-203ENST00000334536 SPDYE4A6NLX3 237 aa24.7■■□□□ 1.54
SPNS1-203ENST00000334536 IRX3P78415 501 aaPredicted RBP24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms