RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 NLRP2Q9NX02 1062 aa23.16■■□□□ 1.3
RFTN1-201ENST00000334133 ADCY9O60503 1353 aa23.16■■□□□ 1.3
RFTN1-201ENST00000334133 RHPN1Q8TCX5 695 aa23.16■■□□□ 1.3
RFTN1-201ENST00000334133 OS9Q13438 667 aaPredicted RBP23.15■■□□□ 1.3
RFTN1-201ENST00000334133 AMOTQ4VCS5 1084 aa23.15■■□□□ 1.3
RFTN1-201ENST00000334133 L1TD1Q5T7N2 865 aaKnown RBP23.15■■□□□ 1.3
RFTN1-201ENST00000334133 GIGYF1O75420 1035 aaPredicted RBP23.15■■□□□ 1.3
RFTN1-201ENST00000334133 UPF3BQ9BZI7 483 aaKnown RBP23.14■■□□□ 1.3
RFTN1-201ENST00000334133 PA2G4Q9UQ80 394 aaKnown RBP23.14■■□□□ 1.3
RFTN1-201ENST00000334133 C9orf78Q9NZ63 289 aaPredicted RBP23.14■■□□□ 1.29
RFTN1-201ENST00000334133 DBF4Q9UBU7 674 aaPredicted RBP23.14■■□□□ 1.29
RFTN1-201ENST00000334133 CACNA1FO60840 1977 aa23.14■■□□□ 1.29
RFTN1-201ENST00000334133 PIP4K2AP48426 406 aaPredicted RBP23.13■■□□□ 1.29
RFTN1-201ENST00000334133 CHRNA2Q15822 529 aa23.13■■□□□ 1.29
RFTN1-201ENST00000334133 FSD2A1L4K1 749 aa23.13■■□□□ 1.29
RFTN1-201ENST00000334133 BAG4O95429 457 aaKnown RBP23.13■■□□□ 1.29
RFTN1-201ENST00000334133 MCTP1Q6DN14 999 aa23.13■■□□□ 1.29
RFTN1-201ENST00000334133 EIF5BO60841 1220 aaKnown RBP23.12■■□□□ 1.29
RFTN1-201ENST00000334133 POLA2Q14181 598 aa23.12■■□□□ 1.29
RFTN1-201ENST00000334133 STAP2Q9UGK3 403 aa23.12■■□□□ 1.29
RFTN1-201ENST00000334133 MYL6BP14649 208 aa23.11■■□□□ 1.29
RFTN1-201ENST00000334133 GAS2L3Q86XJ1 694 aa23.11■■□□□ 1.29
RFTN1-201ENST00000334133 PXDNLA1KZ92 1463 aa23.1■■□□□ 1.29
RFTN1-201ENST00000334133 HOXB7P09629 217 aa23.1■■□□□ 1.29
RFTN1-201ENST00000334133 CSB-PGBD3P0DP91 1061 aa23.1■■□□□ 1.29
RFTN1-201ENST00000334133 MED1Q15648 1581 aaPredicted RBP23.09■■□□□ 1.29
RFTN1-201ENST00000334133 NCLP19338 710 aaKnown RBP23.09■■□□□ 1.29
RFTN1-201ENST00000334133 C19orf44Q9H6X5 657 aa23.09■■□□□ 1.29
RFTN1-201ENST00000334133 ZNF142P52746 1687 aaPredicted RBP23.09■■□□□ 1.29
RFTN1-201ENST00000334133 ERBB3P21860 1342 aa23.09■■□□□ 1.29
RFTN1-201ENST00000334133 NFATC2IPQ8NCF5 419 aa23.08■■□□□ 1.29
RFTN1-201ENST00000334133 PI4K2BQ8TCG2 481 aa23.08■■□□□ 1.29
RFTN1-201ENST00000334133 RAPGEF4Q8WZA2 1011 aa23.08■■□□□ 1.29
RFTN1-201ENST00000334133 JARID2Q92833 1246 aaPredicted RBP23.08■■□□□ 1.29
RFTN1-201ENST00000334133 KIF1BPQ96EK5 621 aa23.08■■□□□ 1.29
RFTN1-201ENST00000334133 TMX3Q96JJ7 454 aa23.08■■□□□ 1.29
RFTN1-201ENST00000334133 DDX49Q9Y6V7 483 aaKnown RBP23.08■■□□□ 1.29
RFTN1-201ENST00000334133 KDM3BQ7LBC6 1761 aa23.08■■□□□ 1.28
RFTN1-201ENST00000334133 RGPD5Q99666 1765 aa23.08■■□□□ 1.28
RFTN1-201ENST00000334133 C1orf167Q5SNV9 1468 aa23.07■■□□□ 1.28
RFTN1-201ENST00000334133 LARP6Q9BRS8 491 aaKnown RBP23.07■■□□□ 1.28
RFTN1-201ENST00000334133 RAB11FIP3O75154 756 aa23.07■■□□□ 1.28
RFTN1-201ENST00000334133 ATF3P18847 181 aa23.06■■□□□ 1.28
RFTN1-201ENST00000334133 CWC27Q6UX04 472 aaKnown RBP23.06■■□□□ 1.28
RFTN1-201ENST00000334133 KSR2Q6VAB6 950 aa23.06■■□□□ 1.28
RFTN1-201ENST00000334133 FOXD4L6Q3SYB3 417 aaPredicted RBP23.06■■□□□ 1.28
RFTN1-201ENST00000334133 FOXD4L3Q6VB84 417 aaPredicted RBP23.06■■□□□ 1.28
RFTN1-201ENST00000334133 ZDHHC9Q9Y397 364 aa23.06■■□□□ 1.28
RFTN1-201ENST00000334133 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.06■■□□□ 1.28
RFTN1-201ENST00000334133 ADAMTSL3P82987 1691 aa23.05■■□□□ 1.28
RFTN1-201ENST00000334133 GOLGA6L22H0YM25 854 aa23.05■■□□□ 1.28
RFTN1-201ENST00000334133 DTNBO60941 627 aa23.05■■□□□ 1.28
RFTN1-201ENST00000334133 MCCP23508 829 aa23.05■■□□□ 1.28
RFTN1-201ENST00000334133 GRPEL1Q9HAV7 217 aa23.05■■□□□ 1.28
RFTN1-201ENST00000334133 SPG7Q9UQ90 795 aa23.05■■□□□ 1.28
RFTN1-201ENST00000334133 LMO7Q8WWI1 1683 aa23.04■■□□□ 1.28
RFTN1-201ENST00000334133 SIL1Q9H173 461 aa23.04■■□□□ 1.28
RFTN1-201ENST00000334133 NUCB2P80303 420 aa23.04■■□□□ 1.28
RFTN1-201ENST00000334133 KLHDC4Q8TBB5 520 aa23.04■■□□□ 1.28
RFTN1-201ENST00000334133 SUCLG2Q96I99 432 aa23.03■■□□□ 1.28
RFTN1-201ENST00000334133 SLIT3O75094 1523 aa23.03■■□□□ 1.28
RFTN1-201ENST00000334133 ZNF790Q6PG37 636 aa23.03■■□□□ 1.28
RFTN1-201ENST00000334133 CYP2E1P05181 493 aaPredicted RBP23.02■■□□□ 1.28
RFTN1-201ENST00000334133 RIC3Q7Z5B4 369 aa23.02■■□□□ 1.28
RFTN1-201ENST00000334133 PDIA6Q15084 440 aa23.01■■□□□ 1.27
RFTN1-201ENST00000334133 TMEM94Q12767 1356 aa23.01■■□□□ 1.27
RFTN1-201ENST00000334133 TUBGCP6Q96RT7 1819 aa23.01■■□□□ 1.27
RFTN1-201ENST00000334133 PRPF40AO75400 957 aaKnown RBP23.01■■□□□ 1.27
RFTN1-201ENST00000334133 BICC1Q9H694 974 aaKnown RBP23.01■■□□□ 1.27
RFTN1-201ENST00000334133 MRE11P49959 708 aa23.01■■□□□ 1.27
RFTN1-201ENST00000334133 SKOR2Q2VWA4 1001 aaPredicted RBP23.01■■□□□ 1.27
RFTN1-201ENST00000334133 KAZALD1Q96I82 304 aa23.01■■□□□ 1.27
RFTN1-201ENST00000334133 HSPA2P54652 639 aa23■■□□□ 1.27
RFTN1-201ENST00000334133 CLASRPQ8N2M8 674 aaKnown RBP23■■□□□ 1.27
RFTN1-201ENST00000334133 ZNF496Q96IT1 587 aaPredicted RBP23■■□□□ 1.27
RFTN1-201ENST00000334133 HYPKQ9NX55 129 aa23■■□□□ 1.27
RFTN1-201ENST00000334133 CPA1P15085 419 aa23■■□□□ 1.27
RFTN1-201ENST00000334133 NPHP3Q7Z494 1330 aa23■■□□□ 1.27
RFTN1-201ENST00000334133 GRM8O00222 908 aa22.99■■□□□ 1.27
RFTN1-201ENST00000334133 TATP17735 454 aaPredicted RBP22.99■■□□□ 1.27
RFTN1-201ENST00000334133 DDX54Q8TDD1 881 aaKnown RBP22.99■■□□□ 1.27
RFTN1-201ENST00000334133 CCDC8Q9H0W5 538 aaPredicted RBP22.99■■□□□ 1.27
RFTN1-201ENST00000334133 CWC22Q9HCG8 908 aaKnown RBP22.99■■□□□ 1.27
RFTN1-201ENST00000334133 DDX21Q9NR30 783 aaKnown RBP eCLIP22.99■■□□□ 1.27
RFTN1-201ENST00000334133 CAVIN1Q6NZI2 390 aaKnown RBP22.99■■□□□ 1.27
RFTN1-201ENST00000334133 AACSQ86V21 672 aa22.99■■□□□ 1.27
RFTN1-201ENST00000334133 CNTROBQ8N137 903 aa22.99■■□□□ 1.27
RFTN1-201ENST00000334133 XAGE3Q8WTP9 111 aa22.99■■□□□ 1.27
RFTN1-201ENST00000334133 CHMP4AQ9BY43 222 aa22.99■■□□□ 1.27
RFTN1-201ENST00000334133 SLC52A2Q9HAB3 445 aa22.99■■□□□ 1.27
RFTN1-201ENST00000334133 RRAGDQ9NQL2 400 aaPredicted RBP22.99■■□□□ 1.27
RFTN1-201ENST00000334133 USP16Q9Y5T5 823 aa22.99■■□□□ 1.27
RFTN1-201ENST00000334133 N4BP2Q86UW6 1770 aaPredicted RBP22.99■■□□□ 1.27
RFTN1-201ENST00000334133 PHKG2P15735 406 aa22.98■■□□□ 1.27
RFTN1-201ENST00000334133 COPS6Q7L5N1 327 aa22.98■■□□□ 1.27
RFTN1-201ENST00000334133 IGKV5-2P06315 115 aa22.98■■□□□ 1.27
RFTN1-201ENST00000334133 RASEFQ8IZ41 740 aa22.98■■□□□ 1.27
RFTN1-201ENST00000334133 HEG1Q9ULI3 1381 aa22.98■■□□□ 1.27
RFTN1-201ENST00000334133 IFIT2P09913 472 aaKnown RBP22.98■■□□□ 1.27
RFTN1-201ENST00000334133 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms