RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 BEND3Q5T5X7 828 aa13.14□□□□□ -0.31
CCDC172-201ENST00000333254 RNMTO43148 476 aaKnown RBP13.13□□□□□ -0.31
CCDC172-201ENST00000333254 BAG4O95429 457 aaKnown RBP13.13□□□□□ -0.31
CCDC172-201ENST00000333254 GCP02774 474 aa13.13□□□□□ -0.31
CCDC172-201ENST00000333254 ZNF530Q6P9A1 599 aaPredicted RBP13.13□□□□□ -0.31
CCDC172-201ENST00000333254 C14orf37Q86TY3 774 aa13.13□□□□□ -0.31
CCDC172-201ENST00000333254 USHBP1Q8N6Y0 703 aa13.13□□□□□ -0.31
CCDC172-201ENST00000333254 KIF1BPQ96EK5 621 aa13.13□□□□□ -0.31
CCDC172-201ENST00000333254 DBF4Q9UBU7 674 aaPredicted RBP13.13□□□□□ -0.31
CCDC172-201ENST00000333254 ADCY9O60503 1353 aa13.13□□□□□ -0.31
CCDC172-201ENST00000333254 MRC1P22897 1456 aa13.13□□□□□ -0.31
CCDC172-201ENST00000333254 C1orf167Q5SNV9 1468 aa13.13□□□□□ -0.31
CCDC172-201ENST00000333254 APBB1O00213 710 aa13.12□□□□□ -0.31
CCDC172-201ENST00000333254 SSFA2P28290 1259 aa13.12□□□□□ -0.31
CCDC172-201ENST00000333254 INTS4Q96HW7 963 aaKnown RBP13.12□□□□□ -0.31
CCDC172-201ENST00000333254 PHAXQ9H814 394 aaKnown RBP13.12□□□□□ -0.31
CCDC172-201ENST00000333254 C5P01031 1676 aa13.12□□□□□ -0.31
CCDC172-201ENST00000333254 LAMB4A4D0S4 1761 aa13.12□□□□□ -0.31
CCDC172-201ENST00000333254 CUL4AQ13619 759 aa13.12□□□□□ -0.31
CCDC172-201ENST00000333254 LGR6Q9HBX8 967 aa13.12□□□□□ -0.31
CCDC172-201ENST00000333254 TTC41PQ6P2S7 1318 aa13.11□□□□□ -0.31
CCDC172-201ENST00000333254 BTBD11A6QL63 1104 aa13.11□□□□□ -0.31
CCDC172-201ENST00000333254 C1orf141Q5JVX7 400 aa13.11□□□□□ -0.31
CCDC172-201ENST00000333254 PPP1R42Q7Z4L9 355 aa13.11□□□□□ -0.31
CCDC172-201ENST00000333254 RHPN1Q8TCX5 695 aa13.11□□□□□ -0.31
CCDC172-201ENST00000333254 GRPEL1Q9HAV7 217 aa13.11□□□□□ -0.31
CCDC172-201ENST00000333254 CHPF2Q9P2E5 772 aa13.11□□□□□ -0.31
CCDC172-201ENST00000333254 UTYO14607 1347 aa13.1□□□□□ -0.31
CCDC172-201ENST00000333254 GIGYF1O75420 1035 aaPredicted RBP13.09□□□□□ -0.31
CCDC172-201ENST00000333254 PI4K2BQ8TCG2 481 aa13.09□□□□□ -0.31
CCDC172-201ENST00000333254 ANKRD24Q8TF21 1146 aa13.09□□□□□ -0.31
CCDC172-201ENST00000333254 NECTIN2Q92692 538 aa13.09□□□□□ -0.31
CCDC172-201ENST00000333254 HYPKQ9NX55 129 aa13.09□□□□□ -0.31
CCDC172-201ENST00000333254 PI4KAP2A4QPH2 592 aa13.08□□□□□ -0.31
CCDC172-201ENST00000333254 KSR2Q6VAB6 950 aa13.08□□□□□ -0.31
CCDC172-201ENST00000333254 ERC1Q8IUD2 1116 aa13.08□□□□□ -0.31
CCDC172-201ENST00000333254 PI4KAP1Q8N8J0 262 aa13.08□□□□□ -0.31
CCDC172-201ENST00000333254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.08□□□□□ -0.31
CCDC172-201ENST00000333254 SRGAP3O43295 1099 aa13.08□□□□□ -0.32
CCDC172-201ENST00000333254 SURF6O75683 361 aaKnown RBP13.08□□□□□ -0.32
CCDC172-201ENST00000333254 HSPA4P34932 840 aa13.08□□□□□ -0.32
CCDC172-201ENST00000333254 GZF1Q9H116 711 aaPredicted RBP13.08□□□□□ -0.32
CCDC172-201ENST00000333254 ERBB3P21860 1342 aa13.07□□□□□ -0.32
CCDC172-201ENST00000333254 RAD50Q92878 1312 aa13.07□□□□□ -0.32
CCDC172-201ENST00000333254 TRIM6-TRIM34B2RNG4 842 aa13.07□□□□□ -0.32
CCDC172-201ENST00000333254 ZNF445P59923 1031 aa13.07□□□□□ -0.32
CCDC172-201ENST00000333254 CNTROBQ8N137 903 aa13.07□□□□□ -0.32
CCDC172-201ENST00000333254 LRRC59Q96AG4 307 aaKnown RBP13.07□□□□□ -0.32
CCDC172-201ENST00000333254 TMX3Q96JJ7 454 aa13.07□□□□□ -0.32
CCDC172-201ENST00000333254 FOXD4L1Q9NU39 408 aa13.07□□□□□ -0.32
CCDC172-201ENST00000333254 SGSM2O43147 1006 aa13.06□□□□□ -0.32
CCDC172-201ENST00000333254 PLEKHG5O94827 1062 aa13.06□□□□□ -0.32
CCDC172-201ENST00000333254 NBPF7P0C2Y1 421 aaPredicted RBP13.06□□□□□ -0.32
CCDC172-201ENST00000333254 EIF2S2P20042 333 aaKnown RBP13.06□□□□□ -0.32
CCDC172-201ENST00000333254 NEK4P51957 841 aa13.06□□□□□ -0.32
CCDC172-201ENST00000333254 KRT28Q7Z3Y7 464 aa13.06□□□□□ -0.32
CCDC172-201ENST00000333254 ORAI2Q96SN7 254 aa13.06□□□□□ -0.32
CCDC172-201ENST00000333254 C19orf44Q9H6X5 657 aa13.06□□□□□ -0.32
CCDC172-201ENST00000333254 LMBRD1Q9NUN5 540 aa13.06□□□□□ -0.32
CCDC172-201ENST00000333254 COL15A1P39059 1388 aa13.06□□□□□ -0.32
CCDC172-201ENST00000333254 STRCP1A6NGW2 1772 aa13.06□□□□□ -0.32
CCDC172-201ENST00000333254 AFDNP55196 1824 aaKnown RBP13.06□□□□□ -0.32
CCDC172-201ENST00000333254 KCNQ3O43525 872 aa13.05□□□□□ -0.32
CCDC172-201ENST00000333254 GLRX3O76003 335 aaKnown RBP13.05□□□□□ -0.32
CCDC172-201ENST00000333254 TRHP20396 242 aaPredicted RBP13.05□□□□□ -0.32
CCDC172-201ENST00000333254 MPRIPQ6WCQ1 1025 aa13.05□□□□□ -0.32
CCDC172-201ENST00000333254 LINS1Q8NG48 757 aa13.05□□□□□ -0.32
CCDC172-201ENST00000333254 RILPL2Q969X0 211 aa13.05□□□□□ -0.32
CCDC172-201ENST00000333254 ANO2Q9NQ90 1003 aa13.05□□□□□ -0.32
CCDC172-201ENST00000333254 DDX21Q9NR30 783 aaKnown RBP eCLIP13.05□□□□□ -0.32
CCDC172-201ENST00000333254 DDX58O95786 925 aaKnown RBP13.05□□□□□ -0.32
CCDC172-201ENST00000333254 UNC5CLQ8IV45 518 aa13.05□□□□□ -0.32
CCDC172-201ENST00000333254 ZDHHC9Q9Y397 364 aa13.05□□□□□ -0.32
CCDC172-201ENST00000333254 DDX49Q9Y6V7 483 aaKnown RBP13.05□□□□□ -0.32
CCDC172-201ENST00000333254 ARFGEF2Q9Y6D5 1785 aa13.05□□□□□ -0.32
CCDC172-201ENST00000333254 GLI3P10071 1580 aa13.05□□□□□ -0.32
CCDC172-201ENST00000333254 KDM6AO15550 1401 aaPredicted RBP13.04□□□□□ -0.32
CCDC172-201ENST00000333254 BRD1O95696 1058 aa13.04□□□□□ -0.32
CCDC172-201ENST00000333254 TSHZ3Q63HK5 1081 aa13.04□□□□□ -0.32
CCDC172-201ENST00000333254 ZGPATQ8N5A5 531 aaKnown RBP13.04□□□□□ -0.32
CCDC172-201ENST00000333254 GPATCH3Q96I76 525 aa13.04□□□□□ -0.32
CCDC172-201ENST00000333254 IL1RAPL2Q9NP60 686 aa13.04□□□□□ -0.32
CCDC172-201ENST00000333254 PALD1Q9ULE6 856 aa13.04□□□□□ -0.32
CCDC172-201ENST00000333254 RUFY2Q8WXA3 655 aa13.03□□□□□ -0.32
CCDC172-201ENST00000333254 RTN4Q9NQC3 1192 aaKnown RBP13.03□□□□□ -0.32
CCDC172-201ENST00000333254 MAP3K2Q9Y2U5 619 aa13.03□□□□□ -0.32
CCDC172-201ENST00000333254 UBR2Q8IWV8 1755 aa13.03□□□□□ -0.32
CCDC172-201ENST00000333254 MBD3O95983 291 aa13.02□□□□□ -0.32
CCDC172-201ENST00000333254 PROSER2Q86WR7 435 aaPredicted RBP13.02□□□□□ -0.32
CCDC172-201ENST00000333254 GAS2L3Q86XJ1 694 aa13.02□□□□□ -0.32
CCDC172-201ENST00000333254 NUTM1Q86Y26 1132 aa13.02□□□□□ -0.32
CCDC172-201ENST00000333254 KLHL34Q8N239 644 aa13.02□□□□□ -0.32
CCDC172-201ENST00000333254 CLASRPQ8N2M8 674 aaKnown RBP13.02□□□□□ -0.32
CCDC172-201ENST00000333254 KCNB2Q92953 911 aa13.02□□□□□ -0.32
CCDC172-201ENST00000333254 PANK2Q9BZ23 570 aa13.02□□□□□ -0.32
CCDC172-201ENST00000333254 LSG1Q9H089 658 aaKnown RBP13.02□□□□□ -0.32
CCDC172-201ENST00000333254 SNRKQ9NRH2 765 aa13.02□□□□□ -0.32
CCDC172-201ENST00000333254 NPHP3Q7Z494 1330 aa13.02□□□□□ -0.32
CCDC172-201ENST00000333254 TNS3Q68CZ2 1445 aa13.02□□□□□ -0.32
CCDC172-201ENST00000333254 GRM8O00222 908 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms