RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 GOLGA6L9A6NEM1 432 aa18.58■□□□□ 0.56
SLIT3-201ENST00000332966 TMC6Q7Z403 805 aa18.58■□□□□ 0.56
SLIT3-201ENST00000332966 GCC2Q8IWJ2 1684 aa18.58■□□□□ 0.56
SLIT3-201ENST00000332966 ZBTB7BO15156 539 aaPredicted RBP18.58■□□□□ 0.56
SLIT3-201ENST00000332966 EMILIN1Q9Y6C2 1016 aa18.58■□□□□ 0.56
SLIT3-201ENST00000332966 MEIS3Q99687 375 aa18.57■□□□□ 0.56
SLIT3-201ENST00000332966 EPB41L2O43491 1005 aaKnown RBP18.57■□□□□ 0.56
SLIT3-201ENST00000332966 CDKL5O76039 1030 aa18.57■□□□□ 0.56
SLIT3-201ENST00000332966 PTGS1P23219 599 aa18.57■□□□□ 0.56
SLIT3-201ENST00000332966 PLEKHO1Q53GL0 409 aaPredicted RBP18.57■□□□□ 0.56
SLIT3-201ENST00000332966 FSIP1Q8NA03 581 aa18.57■□□□□ 0.56
SLIT3-201ENST00000332966 TYRO3Q06418 890 aa18.57■□□□□ 0.56
SLIT3-201ENST00000332966 CTNNA3Q9UI47 895 aa18.57■□□□□ 0.56
SLIT3-201ENST00000332966 NUP153P49790 1475 aaKnown RBP18.57■□□□□ 0.56
SLIT3-201ENST00000332966 VAMP4O75379 141 aa18.57■□□□□ 0.56
SLIT3-201ENST00000332966 NCBP3Q53F19 620 aaKnown RBP18.57■□□□□ 0.56
SLIT3-201ENST00000332966 IQCEQ6IPM2 695 aa18.57■□□□□ 0.56
SLIT3-201ENST00000332966 TRMT2AQ8IZ69 625 aaKnown RBP18.57■□□□□ 0.56
SLIT3-201ENST00000332966 POTEB2H3BUK9 544 aa18.56■□□□□ 0.56
SLIT3-201ENST00000332966 CLSTN1O94985 981 aa18.56■□□□□ 0.56
SLIT3-201ENST00000332966 DNM1Q05193 864 aaKnown RBP18.56■□□□□ 0.56
SLIT3-201ENST00000332966 KIF5CO60282 957 aa18.56■□□□□ 0.56
SLIT3-201ENST00000332966 DACT1Q9NYF0 836 aa18.56■□□□□ 0.56
SLIT3-201ENST00000332966 IGSF3O75054 1194 aa18.56■□□□□ 0.56
SLIT3-201ENST00000332966 HMGB1P09429 215 aaKnown RBP18.56■□□□□ 0.56
SLIT3-201ENST00000332966 MAGEC2Q9UBF1 373 aaPredicted RBP18.56■□□□□ 0.56
SLIT3-201ENST00000332966 PATL2C9JE40 543 aaKnown RBP18.56■□□□□ 0.56
SLIT3-201ENST00000332966 GABPB1Q06547 395 aaPredicted RBP18.56■□□□□ 0.56
SLIT3-201ENST00000332966 EVI5LQ96CN4 794 aa18.56■□□□□ 0.56
SLIT3-201ENST00000332966 ZSCAN16Q9H4T2 348 aaPredicted RBP18.56■□□□□ 0.56
SLIT3-201ENST00000332966 CCDC61Q9Y6R9 512 aa18.56■□□□□ 0.56
SLIT3-201ENST00000332966 NOS1P29475 1434 aa18.55■□□□□ 0.56
SLIT3-201ENST00000332966 FLIIQ13045 1269 aa18.55■□□□□ 0.56
SLIT3-201ENST00000332966 TXNDC2Q86VQ3 553 aa18.55■□□□□ 0.56
SLIT3-201ENST00000332966 RAPGEF6Q8TEU7 1601 aa18.55■□□□□ 0.56
SLIT3-201ENST00000332966 FAM107BQ9H098 131 aa18.55■□□□□ 0.56
SLIT3-201ENST00000332966 ECHDC1Q9NTX5 307 aa18.55■□□□□ 0.56
SLIT3-201ENST00000332966 FAM177BA6PVY3 158 aa18.55■□□□□ 0.56
SLIT3-201ENST00000332966 SHANK2Q9UPX8 1470 aa18.55■□□□□ 0.56
SLIT3-201ENST00000332966 CCAR1Q8IX12 1150 aaKnown RBP18.55■□□□□ 0.56
SLIT3-201ENST00000332966 CRACR2AQ9BSW2 395 aa18.55■□□□□ 0.56
SLIT3-201ENST00000332966 GRIN2AQ12879 1464 aa18.55■□□□□ 0.56
SLIT3-201ENST00000332966 GNAT3A8MTJ3 354 aa18.54■□□□□ 0.56
SLIT3-201ENST00000332966 RIOK3O14730 519 aaKnown RBP18.54■□□□□ 0.56
SLIT3-201ENST00000332966 MAP9Q49MG5 647 aa18.54■□□□□ 0.56
SLIT3-201ENST00000332966 TRIM22Q8IYM9 498 aa18.54■□□□□ 0.56
SLIT3-201ENST00000332966 LAMC3Q9Y6N6 1575 aa18.54■□□□□ 0.56
SLIT3-201ENST00000332966 SLC3A2P08195 630 aaKnown RBP18.54■□□□□ 0.56
SLIT3-201ENST00000332966 KIF4BQ2VIQ3 1234 aa18.54■□□□□ 0.56
SLIT3-201ENST00000332966 PUS7Q96PZ0 661 aaKnown RBP18.53■□□□□ 0.56
SLIT3-201ENST00000332966 SRRTQ9BXP5 876 aaKnown RBP18.53■□□□□ 0.56
SLIT3-201ENST00000332966 TMEM63CQ9P1W3 806 aa18.53■□□□□ 0.56
SLIT3-201ENST00000332966 MCM3P25205 808 aa18.53■□□□□ 0.56
SLIT3-201ENST00000332966 CEP85Q6P2H3 762 aa18.53■□□□□ 0.56
SLIT3-201ENST00000332966 CCDC148Q8NFR7 591 aa18.53■□□□□ 0.56
SLIT3-201ENST00000332966 LMAN1P49257 510 aa18.53■□□□□ 0.56
SLIT3-201ENST00000332966 CCDC191Q8NCU4 936 aa18.53■□□□□ 0.56
SLIT3-201ENST00000332966 URB2Q14146 1524 aaKnown RBP18.53■□□□□ 0.56
SLIT3-201ENST00000332966 RAPGEF4Q8WZA2 1011 aa18.52■□□□□ 0.56
SLIT3-201ENST00000332966 TBC1D2BQ9UPU7 963 aa18.52■□□□□ 0.56
SLIT3-201ENST00000332966 U3KPZ7 1027 aaPredicted RBP18.52■□□□□ 0.56
SLIT3-201ENST00000332966 NPHP3Q7Z494 1330 aa18.52■□□□□ 0.56
SLIT3-201ENST00000332966 TXLNAP40222 546 aa18.52■□□□□ 0.56
SLIT3-201ENST00000332966 CCDC158Q5M9N0 1113 aa18.52■□□□□ 0.56
SLIT3-201ENST00000332966 C8orf58Q8NAV2 365 aa18.52■□□□□ 0.56
SLIT3-201ENST00000332966 DNAJC25Q9H1X3 360 aa18.52■□□□□ 0.56
SLIT3-201ENST00000332966 ADGRL2O95490 1459 aa18.52■□□□□ 0.55
SLIT3-201ENST00000332966 PSME1Q06323 249 aa18.52■□□□□ 0.55
SLIT3-201ENST00000332966 NUTM2GQ5VZR2 741 aa18.52■□□□□ 0.55
SLIT3-201ENST00000332966 IBTKQ9P2D0 1353 aaPredicted RBP18.52■□□□□ 0.55
SLIT3-201ENST00000332966 ZNF521Q96K83 1311 aa18.52■□□□□ 0.55
SLIT3-201ENST00000332966 GOLGA6L10A6NI86 522 aa18.51■□□□□ 0.55
SLIT3-201ENST00000332966 BOLA2Q9H3K6 86 aa18.51■□□□□ 0.55
SLIT3-201ENST00000332966 HMG20BQ9P0W2 317 aa18.51■□□□□ 0.55
SLIT3-201ENST00000332966 WDR62O43379 1518 aa18.51■□□□□ 0.55
SLIT3-201ENST00000332966 NME9Q86XW9 330 aa18.51■□□□□ 0.55
SLIT3-201ENST00000332966 NUDT16Q96DE0 195 aaKnown RBP18.51■□□□□ 0.55
SLIT3-201ENST00000332966 ARFGAP3Q9NP61 516 aa18.51■□□□□ 0.55
SLIT3-201ENST00000332966 FYB1O15117 783 aa18.51■□□□□ 0.55
SLIT3-201ENST00000332966 SHTN1A0MZ66 631 aa18.51■□□□□ 0.55
SLIT3-201ENST00000332966 FAM83GA6ND36 823 aa18.51■□□□□ 0.55
SLIT3-201ENST00000332966 U2AF2P26368 475 aaKnown RBP eCLIP18.51■□□□□ 0.55
SLIT3-201ENST00000332966 FAM193AP78312 1265 aa18.51■□□□□ 0.55
SLIT3-201ENST00000332966 PDE4CQ08493 712 aa18.5■□□□□ 0.55
SLIT3-201ENST00000332966 CCDC181Q5TID7 509 aa18.5■□□□□ 0.55
SLIT3-201ENST00000332966 C8orf76Q96K31 380 aa18.5■□□□□ 0.55
SLIT3-201ENST00000332966 UNC13AQ9UPW8 1703 aa18.5■□□□□ 0.55
SLIT3-201ENST00000332966 A2MP01023 1474 aa18.5■□□□□ 0.55
SLIT3-201ENST00000332966 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.5■□□□□ 0.55
SLIT3-201ENST00000332966 NECAB1Q8N987 351 aa18.5■□□□□ 0.55
SLIT3-201ENST00000332966 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.5■□□□□ 0.55
SLIT3-201ENST00000332966 V9GYY5 206 aaPredicted RBP18.5■□□□□ 0.55
SLIT3-201ENST00000332966 SYT1P21579 422 aa18.49■□□□□ 0.55
SLIT3-201ENST00000332966 RHPN1Q8TCX5 695 aa18.49■□□□□ 0.55
SLIT3-201ENST00000332966 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.49■□□□□ 0.55
SLIT3-201ENST00000332966 PPP1R42Q7Z4L9 355 aa18.49■□□□□ 0.55
SLIT3-201ENST00000332966 ERO1AQ96HE7 468 aa18.49■□□□□ 0.55
SLIT3-201ENST00000332966 GNG11P61952 73 aa18.49■□□□□ 0.55
SLIT3-201ENST00000332966 TAF7Q15545 349 aaPredicted RBP18.49■□□□□ 0.55
SLIT3-201ENST00000332966 ABTB2Q8N961 1025 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms