RNA–Protein interactions for RNA: ENST00000332118.10

SRPRA-201, Transcript of SRP receptor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPRA, Length 3,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-201ENST00000332118 KIF2CQ99661 725 aa16.96■□□□□ 0.31
SRPRA-201ENST00000332118 HSP90AB1P08238 724 aaKnown RBP16.95■□□□□ 0.3
SRPRA-201ENST00000332118 NKX1-1Q15270 411 aaPredicted RBP16.95■□□□□ 0.3
SRPRA-201ENST00000332118 DNAAF4Q8WXU2 420 aa16.95■□□□□ 0.3
SRPRA-201ENST00000332118 HYPKQ9NX55 129 aa16.95■□□□□ 0.3
SRPRA-201ENST00000332118 SLAIN2Q9P270 581 aa16.95■□□□□ 0.3
SRPRA-201ENST00000332118 LRP10Q7Z4F1 713 aa16.95■□□□□ 0.3
SRPRA-201ENST00000332118 TBC1D2Q9BYX2 928 aa16.95■□□□□ 0.3
SRPRA-201ENST00000332118 COL16A1Q07092 1604 aaPredicted RBP16.95■□□□□ 0.3
SRPRA-201ENST00000332118 IL17RAQ96F46 866 aa16.95■□□□□ 0.3
SRPRA-201ENST00000332118 SRCIN1Q9C0H9 1055 aa16.95■□□□□ 0.3
SRPRA-201ENST00000332118 ZNF790Q6PG37 636 aa16.94■□□□□ 0.3
SRPRA-201ENST00000332118 SLC4A10Q6U841 1118 aa16.94■□□□□ 0.3
SRPRA-201ENST00000332118 DDX21Q9NR30 783 aaKnown RBP eCLIP16.94■□□□□ 0.33e-7■□□□□ 11
SRPRA-201ENST00000332118 ZNF335Q9H4Z2 1342 aaPredicted RBP16.93■□□□□ 0.3
SRPRA-201ENST00000332118 USP42Q9H9J4 1324 aaKnown RBP16.93■□□□□ 0.3
SRPRA-201ENST00000332118 PNMA6EA0A0J9YXQ4 647 aa16.93■□□□□ 0.3
SRPRA-201ENST00000332118 RAB11FIP3O75154 756 aa16.93■□□□□ 0.3
SRPRA-201ENST00000332118 DDIT3P35638 169 aa16.93■□□□□ 0.3
SRPRA-201ENST00000332118 CYP27B1O15528 508 aa16.93■□□□□ 0.3
SRPRA-201ENST00000332118 LMOD2Q6P5Q4 547 aa16.93■□□□□ 0.3
SRPRA-201ENST00000332118 KSR2Q6VAB6 950 aa16.93■□□□□ 0.3
SRPRA-201ENST00000332118 CICQ96RK0 1608 aaPredicted RBP16.92■□□□□ 0.3
SRPRA-201ENST00000332118 SLC4A3P48751 1232 aa16.92■□□□□ 0.3
SRPRA-201ENST00000332118 TJP1Q07157 1748 aa16.91■□□□□ 0.3
SRPRA-201ENST00000332118 UBTFL1P0CB47 393 aaPredicted RBP16.91■□□□□ 0.3
SRPRA-201ENST00000332118 MFAP1P55081 439 aaKnown RBP16.91■□□□□ 0.3
SRPRA-201ENST00000332118 AFDNP55196 1824 aaKnown RBP16.91■□□□□ 0.3
SRPRA-201ENST00000332118 ROBO1Q9Y6N7 1651 aa16.91■□□□□ 0.3
SRPRA-201ENST00000332118 ERBB4Q15303 1308 aa16.91■□□□□ 0.3
SRPRA-201ENST00000332118 EPB41L2O43491 1005 aaKnown RBP16.91■□□□□ 0.3
SRPRA-201ENST00000332118 PDE1AP54750 535 aa16.91■□□□□ 0.3
SRPRA-201ENST00000332118 LRRFIP2Q9Y608 721 aaKnown RBP16.91■□□□□ 0.3
SRPRA-201ENST00000332118 LTBP4Q8N2S1 1624 aa16.91■□□□□ 0.3
SRPRA-201ENST00000332118 C16orf71Q8IYS4 520 aaPredicted RBP16.9■□□□□ 0.3
SRPRA-201ENST00000332118 LRRCC1Q9C099 1032 aa16.9■□□□□ 0.3
SRPRA-201ENST00000332118 DISP2A7MBM2 1401 aa16.9■□□□□ 0.3
SRPRA-201ENST00000332118 DAXXQ9UER7 740 aaPredicted RBP16.9■□□□□ 0.3
SRPRA-201ENST00000332118 NRAPQ86VF7 1730 aa16.9■□□□□ 0.3
SRPRA-201ENST00000332118 AK9Q5TCS8 1911 aa16.9■□□□□ 0.3
SRPRA-201ENST00000332118 PCDH11XQ9BZA7 1347 aa16.9■□□□□ 0.3
SRPRA-201ENST00000332118 PCDH11YQ9BZA8 1340 aa16.9■□□□□ 0.3
SRPRA-201ENST00000332118 ZBTB7CA1YPR0 619 aa16.9■□□□□ 0.3
SRPRA-201ENST00000332118 CARD10Q9BWT7 1032 aa16.9■□□□□ 0.3
SRPRA-201ENST00000332118 NLRP2Q9NX02 1062 aa16.9■□□□□ 0.3
SRPRA-201ENST00000332118 PI4KAP2A4QPH2 592 aa16.89■□□□□ 0.29
SRPRA-201ENST00000332118 PI4KAP1Q8N8J0 262 aa16.89■□□□□ 0.29
SRPRA-201ENST00000332118 SDSP20132 328 aa16.89■□□□□ 0.29
SRPRA-201ENST00000332118 OTUD7AQ8TE49 926 aaPredicted RBP16.89■□□□□ 0.29
SRPRA-201ENST00000332118 HDAC5Q9UQL6 1122 aa16.89■□□□□ 0.29
SRPRA-201ENST00000332118 CABLES1Q8TDN4 633 aa16.88■□□□□ 0.29
SRPRA-201ENST00000332118 IL27Q8NEV9 243 aa16.88■□□□□ 0.29
SRPRA-201ENST00000332118 RTN4Q9NQC3 1192 aaKnown RBP16.88■□□□□ 0.29
SRPRA-201ENST00000332118 ERVV-2B6SEH9 535 aa16.87■□□□□ 0.29
SRPRA-201ENST00000332118 PROSER3Q2NL68 480 aa16.87■□□□□ 0.29
SRPRA-201ENST00000332118 LINS1Q8NG48 757 aa16.87■□□□□ 0.29
SRPRA-201ENST00000332118 NECTIN2Q92692 538 aa16.87■□□□□ 0.29
SRPRA-201ENST00000332118 EIF2S2P20042 333 aaKnown RBP16.86■□□□□ 0.29
SRPRA-201ENST00000332118 ITGB4P16144 1822 aa16.86■□□□□ 0.29
SRPRA-201ENST00000332118 SMARCA5O60264 1052 aaPredicted RBP16.86■□□□□ 0.29
SRPRA-201ENST00000332118 NBPF7P0C2Y1 421 aaPredicted RBP16.86■□□□□ 0.29
SRPRA-201ENST00000332118 NFKBIBQ15653 356 aa16.86■□□□□ 0.29
SRPRA-201ENST00000332118 USP26Q9BXU7 913 aa16.86■□□□□ 0.29
SRPRA-201ENST00000332118 MAP3K2Q9Y2U5 619 aa16.85■□□□□ 0.29
SRPRA-201ENST00000332118 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.85■□□□□ 0.29
SRPRA-201ENST00000332118 PRAMEF22A3QJZ6 481 aa16.85■□□□□ 0.29
SRPRA-201ENST00000332118 DDX58O95786 925 aaKnown RBP16.85■□□□□ 0.29
SRPRA-201ENST00000332118 SNRPA1P09661 255 aaKnown RBP16.85■□□□□ 0.29
SRPRA-201ENST00000332118 MX1P20591 662 aa16.85■□□□□ 0.29
SRPRA-201ENST00000332118 CHRNA2Q15822 529 aa16.85■□□□□ 0.29
SRPRA-201ENST00000332118 HSP90AB4PQ58FF6 505 aa16.85■□□□□ 0.29
SRPRA-201ENST00000332118 PPP1R42Q7Z4L9 355 aa16.84■□□□□ 0.29
SRPRA-201ENST00000332118 NFATC2IPQ8NCF5 419 aa16.84■□□□□ 0.29
SRPRA-201ENST00000332118 FMNL2Q96PY5 1086 aa16.83■□□□□ 0.29
SRPRA-201ENST00000332118 EXOC6BQ9Y2D4 811 aa16.83■□□□□ 0.28
SRPRA-201ENST00000332118 RREB1Q92766 1687 aa16.83■□□□□ 0.28
SRPRA-201ENST00000332118 ZNF496Q96IT1 587 aaPredicted RBP16.83■□□□□ 0.28
SRPRA-201ENST00000332118 KIF1BPQ96EK5 621 aa16.82■□□□□ 0.28
SRPRA-201ENST00000332118 KAZALD1Q96I82 304 aa16.82■□□□□ 0.28
SRPRA-201ENST00000332118 NWD2Q9ULI1 1742 aa16.82■□□□□ 0.28
SRPRA-201ENST00000332118 LARP1Q6PKG0 1096 aaKnown RBP16.81■□□□□ 0.28
SRPRA-201ENST00000332118 CASC1Q6TDU7 716 aa16.81■□□□□ 0.28
SRPRA-201ENST00000332118 TTC41PQ6P2S7 1318 aa16.81■□□□□ 0.28
SRPRA-201ENST00000332118 IGKV5-2P06315 115 aa16.81■□□□□ 0.28
SRPRA-201ENST00000332118 CSB-PGBD3P0DP91 1061 aa16.81■□□□□ 0.28
SRPRA-201ENST00000332118 ZCRB1Q8TBF4 217 aaKnown RBP16.81■□□□□ 0.28
SRPRA-201ENST00000332118 PI4K2BQ8TCG2 481 aa16.81■□□□□ 0.28
SRPRA-201ENST00000332118 METTL22Q9BUU2 404 aaPredicted RBP16.81■□□□□ 0.28
SRPRA-201ENST00000332118 RHPN1Q8TCX5 695 aa16.81■□□□□ 0.28
SRPRA-201ENST00000332118 PRDM11Q9NQV5 511 aa16.81■□□□□ 0.28
SRPRA-201ENST00000332118 CIZ1Q9ULV3 898 aaPredicted RBP16.81■□□□□ 0.28
SRPRA-201ENST00000332118 GRM8O00222 908 aa16.8■□□□□ 0.28
SRPRA-201ENST00000332118 IL2RBP14784 551 aa16.8■□□□□ 0.28
SRPRA-201ENST00000332118 RTL5Q5HYW3 569 aaPredicted RBP16.8■□□□□ 0.28
SRPRA-201ENST00000332118 ZNF831Q5JPB2 1677 aa16.8■□□□□ 0.28
SRPRA-201ENST00000332118 REC8O95072 547 aa16.79■□□□□ 0.28
SRPRA-201ENST00000332118 RABEP1Q15276 862 aa16.79■□□□□ 0.28
SRPRA-201ENST00000332118 HSCBQ8IWL3 235 aa16.79■□□□□ 0.28
SRPRA-201ENST00000332118 NEURL1BA8MQ27 555 aa16.79■□□□□ 0.28
SRPRA-201ENST00000332118 ERC2O15083 957 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms