RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.43□□□□□ -0.58
SS18L1-201ENST00000331758 LMTK2Q8IWU2 1503 aa11.43□□□□□ -0.58
SS18L1-201ENST00000331758 GLI2P10070 1586 aa11.43□□□□□ -0.58
SS18L1-201ENST00000331758 PHF14O94880 888 aa11.43□□□□□ -0.58
SS18L1-201ENST00000331758 PDE1AP54750 535 aa11.43□□□□□ -0.58
SS18L1-201ENST00000331758 NFXL1Q6ZNB6 911 aa11.43□□□□□ -0.58
SS18L1-201ENST00000331758 JAKMIP1Q96N16 626 aaKnown RBP11.43□□□□□ -0.58
SS18L1-201ENST00000331758 AATKQ6ZMQ8 1374 aa11.42□□□□□ -0.58
SS18L1-201ENST00000331758 USP6P35125 1406 aa11.42□□□□□ -0.58
SS18L1-201ENST00000331758 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.42□□□□□ -0.58
SS18L1-201ENST00000331758 STK3Q13188 491 aa11.42□□□□□ -0.58
SS18L1-201ENST00000331758 PRPF40AO75400 957 aaKnown RBP11.42□□□□□ -0.58
SS18L1-201ENST00000331758 ECHDC1Q9NTX5 307 aa11.42□□□□□ -0.58
SS18L1-201ENST00000331758 PA2G4Q9UQ80 394 aaKnown RBP11.42□□□□□ -0.58
SS18L1-201ENST00000331758 GRM8O00222 908 aa11.41□□□□□ -0.58
SS18L1-201ENST00000331758 CHMP4CQ96CF2 233 aa11.41□□□□□ -0.58
SS18L1-201ENST00000331758 ALKQ9UM73 1620 aa11.41□□□□□ -0.58
SS18L1-201ENST00000331758 IL2RBP14784 551 aa11.41□□□□□ -0.58
SS18L1-201ENST00000331758 KDM4AO75164 1064 aa11.41□□□□□ -0.58
SS18L1-201ENST00000331758 MCM4P33991 863 aa11.41□□□□□ -0.58
SS18L1-201ENST00000331758 AKAP17AQ02040 695 aaKnown RBP11.41□□□□□ -0.58
SS18L1-201ENST00000331758 METTL24Q5JXM2 366 aa11.41□□□□□ -0.58
SS18L1-201ENST00000331758 LINS1Q8NG48 757 aa11.41□□□□□ -0.58
SS18L1-201ENST00000331758 DCAF5Q96JK2 942 aa11.41□□□□□ -0.58
SS18L1-201ENST00000331758 TRMT112Q9UI30 125 aaKnown RBP11.41□□□□□ -0.58
SS18L1-201ENST00000331758 BLOC1S2Q6QNY1 142 aa11.4□□□□□ -0.58
SS18L1-201ENST00000331758 BICD2Q8TD16 824 aa11.4□□□□□ -0.58
SS18L1-201ENST00000331758 GOLGA6L6A8MZA4 724 aa11.4□□□□□ -0.58
SS18L1-201ENST00000331758 PRPF40BQ6NWY9 871 aaKnown RBP11.4□□□□□ -0.58
SS18L1-201ENST00000331758 CAVIN1Q6NZI2 390 aaKnown RBP11.4□□□□□ -0.58
SS18L1-201ENST00000331758 OTUD7AQ8TE49 926 aaPredicted RBP11.4□□□□□ -0.58
SS18L1-201ENST00000331758 KCNQ3O43525 872 aa11.4□□□□□ -0.59
SS18L1-201ENST00000331758 ZNF790Q6PG37 636 aa11.4□□□□□ -0.59
SS18L1-201ENST00000331758 FBXW7Q969H0 707 aa11.4□□□□□ -0.59
SS18L1-201ENST00000331758 CWC25Q9NXE8 425 aaPredicted RBP11.4□□□□□ -0.59
SS18L1-201ENST00000331758 ARHGEF10O15013 1369 aa11.39□□□□□ -0.59
SS18L1-201ENST00000331758 USP19O94966 1318 aa11.39□□□□□ -0.59
SS18L1-201ENST00000331758 CASTP20810 708 aaKnown RBP11.39□□□□□ -0.59
SS18L1-201ENST00000331758 ALDH1L1O75891 902 aa11.39□□□□□ -0.59
SS18L1-201ENST00000331758 IFIT5Q13325 482 aaKnown RBP11.39□□□□□ -0.59
SS18L1-201ENST00000331758 PLEKHM2Q8IWE5 1019 aa11.39□□□□□ -0.59
SS18L1-201ENST00000331758 STK11IPQ8N1F8 1099 aa11.39□□□□□ -0.59
SS18L1-201ENST00000331758 LARP6Q9BRS8 491 aaKnown RBP11.39□□□□□ -0.59
SS18L1-201ENST00000331758 NOL10Q9BSC4 688 aaKnown RBP11.39□□□□□ -0.59
SS18L1-201ENST00000331758 SLAIN2Q9P270 581 aa11.39□□□□□ -0.59
SS18L1-201ENST00000331758 RIMBP3CA6NJZ7 1639 aa11.39□□□□□ -0.59
SS18L1-201ENST00000331758 RIMBP3BA6NNM3 1639 aa11.39□□□□□ -0.59
SS18L1-201ENST00000331758 RIMBP3Q9UFD9 1639 aa11.39□□□□□ -0.59
SS18L1-201ENST00000331758 FIBPO43427 364 aa11.39□□□□□ -0.59
SS18L1-201ENST00000331758 CWC22Q9HCG8 908 aaKnown RBP11.39□□□□□ -0.59
SS18L1-201ENST00000331758 TMEM94Q12767 1356 aa11.39□□□□□ -0.59
SS18L1-201ENST00000331758 NRDCO43847 1150 aa11.39□□□□□ -0.59
SS18L1-201ENST00000331758 IDH1O75874 414 aaKnown RBP11.39□□□□□ -0.59
SS18L1-201ENST00000331758 RRP12Q5JTH9 1297 aaKnown RBP11.39□□□□□ -0.59
SS18L1-201ENST00000331758 ACSBG1Q96GR2 724 aa11.39□□□□□ -0.59
SS18L1-201ENST00000331758 DDX21Q9NR30 783 aaKnown RBP eCLIP11.38□□□□□ -0.59
SS18L1-201ENST00000331758 PDRG1Q9NUG6 133 aa11.38□□□□□ -0.59
SS18L1-201ENST00000331758 BTG4Q9NY30 223 aa11.38□□□□□ -0.59
SS18L1-201ENST00000331758 IFIT1P09914 478 aaKnown RBP11.38□□□□□ -0.59
SS18L1-201ENST00000331758 LMBR1LQ6UX01 489 aa11.38□□□□□ -0.59
SS18L1-201ENST00000331758 KIAA2012Q0VF49 1180 aa11.38□□□□□ -0.59
SS18L1-201ENST00000331758 TRIM29Q14134 588 aa11.38□□□□□ -0.59
SS18L1-201ENST00000331758 CAMSAP1Q5T5Y3 1602 aa11.37□□□□□ -0.59
SS18L1-201ENST00000331758 ERICH2A1L162 156 aa11.37□□□□□ -0.59
SS18L1-201ENST00000331758 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.37□□□□□ -0.593e-6■■■■■ 34.5
SS18L1-201ENST00000331758 SNRKQ9NRH2 765 aa11.37□□□□□ -0.59
SS18L1-201ENST00000331758 EIF4A1P60842 406 aaKnown RBP11.37□□□□□ -0.59
SS18L1-201ENST00000331758 CIZ1Q9ULV3 898 aaPredicted RBP11.37□□□□□ -0.59
SS18L1-201ENST00000331758 NPHP4O75161 1426 aaPredicted RBP11.37□□□□□ -0.59
SS18L1-201ENST00000331758 RNF214Q8ND24 703 aa11.37□□□□□ -0.59
SS18L1-201ENST00000331758 RASSF8Q8NHQ8 419 aa11.37□□□□□ -0.59
SS18L1-201ENST00000331758 TEX13AQ9BXU3 409 aaPredicted RBP11.37□□□□□ -0.59
SS18L1-201ENST00000331758 IGSF1Q8N6C5 1336 aa11.36□□□□□ -0.59
SS18L1-201ENST00000331758 ZNF496Q96IT1 587 aaPredicted RBP11.36□□□□□ -0.59
SS18L1-201ENST00000331758 PNMA6EA0A0J9YXQ4 647 aa11.36□□□□□ -0.59
SS18L1-201ENST00000331758 NBPF7P0C2Y1 421 aaPredicted RBP11.36□□□□□ -0.59
SS18L1-201ENST00000331758 LDHAL6AQ6ZMR3 332 aa11.36□□□□□ -0.59
SS18L1-201ENST00000331758 UBAP1LF5GYI3 381 aa11.36□□□□□ -0.59
SS18L1-201ENST00000331758 PDCP20941 246 aa11.36□□□□□ -0.59
SS18L1-201ENST00000331758 ARHGEF25Q86VW2 580 aa11.36□□□□□ -0.59
SS18L1-201ENST00000331758 BABAM1Q9NWV8 329 aa11.36□□□□□ -0.59
SS18L1-201ENST00000331758 AMOTL1Q8IY63 956 aa11.35□□□□□ -0.59
SS18L1-201ENST00000331758 KIAA0232Q92628 1395 aa11.35□□□□□ -0.59
SS18L1-201ENST00000331758 IGHMBP2P38935 993 aaKnown RBP11.35□□□□□ -0.59
SS18L1-201ENST00000331758 HSP90AB3PQ58FF7 597 aa11.35□□□□□ -0.59
SS18L1-201ENST00000331758 ABCF2Q9UG63 623 aa11.35□□□□□ -0.59
SS18L1-201ENST00000331758 MTMR7Q9Y216 660 aa11.35□□□□□ -0.59
SS18L1-201ENST00000331758 TULP4Q9NRJ4 1543 aa11.35□□□□□ -0.59
SS18L1-201ENST00000331758 GOLIM4O00461 696 aa11.35□□□□□ -0.59
SS18L1-201ENST00000331758 RAD21O60216 631 aa11.35□□□□□ -0.59
SS18L1-201ENST00000331758 LARP1BQ659C4 914 aaKnown RBP11.35□□□□□ -0.59
SS18L1-201ENST00000331758 VSIG10Q8N0Z9 540 aa11.35□□□□□ -0.59
SS18L1-201ENST00000331758 EVI5LQ96CN4 794 aa11.35□□□□□ -0.59
SS18L1-201ENST00000331758 AKAP2Q9Y2D5 859 aa11.35□□□□□ -0.59
SS18L1-201ENST00000331758 SOS1Q07889 1333 aaPredicted RBP11.35□□□□□ -0.59
SS18L1-201ENST00000331758 SETBP1Q9Y6X0 1596 aa11.35□□□□□ -0.59
SS18L1-201ENST00000331758 CEBPZQ03701 1054 aaKnown RBP11.35□□□□□ -0.59
SS18L1-201ENST00000331758 ABCC4O15439 1325 aa11.34□□□□□ -0.59
SS18L1-201ENST00000331758 QRICH2Q9H0J4 1663 aa11.34□□□□□ -0.59
SS18L1-201ENST00000331758 DDB1Q16531 1140 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms