RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 DEFB115Q30KQ5 88 aa20.87■□□□□ 0.93
CTHRC1-201ENST00000330295 IFNL2Q8IZJ0 200 aa20.87■□□□□ 0.93
CTHRC1-201ENST00000330295 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.87■□□□□ 0.93
CTHRC1-201ENST00000330295 WDR33Q9C0J8 1336 aaKnown RBP20.86■□□□□ 0.93
CTHRC1-201ENST00000330295 DDNO94850 711 aaPredicted RBP20.86■□□□□ 0.93
CTHRC1-201ENST00000330295 PUS7Q96PZ0 661 aaKnown RBP20.86■□□□□ 0.93
CTHRC1-201ENST00000330295 KIF24Q5T7B8 1368 aa20.85■□□□□ 0.93
CTHRC1-201ENST00000330295 AFDNP55196 1824 aaKnown RBP20.85■□□□□ 0.93
CTHRC1-201ENST00000330295 IQCA1LA6NCM1 817 aa20.83■□□□□ 0.93
CTHRC1-201ENST00000330295 CRKLP46109 303 aaKnown RBP20.83■□□□□ 0.93
CTHRC1-201ENST00000330295 GGNBP2Q9H3C7 697 aa20.83■□□□□ 0.93
CTHRC1-201ENST00000330295 NRXN2Q9P2S2 1712 aa20.83■□□□□ 0.92
CTHRC1-201ENST00000330295 TONSLQ96HA7 1378 aa20.83■□□□□ 0.92
CTHRC1-201ENST00000330295 SCN4AP35499 1836 aa20.83■□□□□ 0.92
CTHRC1-201ENST00000330295 FER1L6Q2WGJ9 1857 aa20.82■□□□□ 0.92
CTHRC1-201ENST00000330295 C2CD5Q86YS7 1000 aa20.82■□□□□ 0.92
CTHRC1-201ENST00000330295 ADAMTS7Q9UKP4 1686 aa20.82■□□□□ 0.92
CTHRC1-201ENST00000330295 THSD7BQ9C0I4 1608 aa20.82■□□□□ 0.92
CTHRC1-201ENST00000330295 FYB1O15117 783 aa20.81■□□□□ 0.92
CTHRC1-201ENST00000330295 BEGAINQ9BUH8 593 aa20.81■□□□□ 0.92
CTHRC1-201ENST00000330295 TAF1DQ9H5J8 278 aaPredicted RBP20.81■□□□□ 0.92
CTHRC1-201ENST00000330295 MCOLN1Q9GZU1 580 aa20.8■□□□□ 0.92
CTHRC1-201ENST00000330295 ERVV-2B6SEH9 535 aa20.79■□□□□ 0.92
CTHRC1-201ENST00000330295 H0YIN7 160 aa20.79■□□□□ 0.92
CTHRC1-201ENST00000330295 ZPR1O75312 459 aa20.78■□□□□ 0.92
CTHRC1-201ENST00000330295 USPL1Q5W0Q7 1092 aa20.78■□□□□ 0.92
CTHRC1-201ENST00000330295 L3MBTL3Q96JM7 780 aaPredicted RBP20.78■□□□□ 0.92
CTHRC1-201ENST00000330295 ABT1Q9ULW3 272 aaKnown RBP20.78■□□□□ 0.92
CTHRC1-201ENST00000330295 LTBP3Q9NS15 1303 aa20.78■□□□□ 0.92
CTHRC1-201ENST00000330295 NFIXQ14938 502 aa20.77■□□□□ 0.92
CTHRC1-201ENST00000330295 EAPPQ56P03 285 aaPredicted RBP20.77■□□□□ 0.92
CTHRC1-201ENST00000330295 C21orf2O43822 256 aa20.76■□□□□ 0.91
CTHRC1-201ENST00000330295 PTCD1O75127 700 aaKnown RBP20.76■□□□□ 0.91
CTHRC1-201ENST00000330295 ZNF219Q9P2Y4 722 aaPredicted RBP20.76■□□□□ 0.91
CTHRC1-201ENST00000330295 ADAMTSL1Q8N6G6 1762 aa20.76■□□□□ 0.91
CTHRC1-201ENST00000330295 SERPINB2P05120 415 aa20.75■□□□□ 0.91
CTHRC1-201ENST00000330295 TAOK3Q9H2K8 898 aa20.75■□□□□ 0.91
CTHRC1-201ENST00000330295 CLEC11AQ9Y240 323 aa20.75■□□□□ 0.91
CTHRC1-201ENST00000330295 TJP1Q07157 1748 aa20.75■□□□□ 0.91
CTHRC1-201ENST00000330295 CARMIL3Q8ND23 1372 aa20.74■□□□□ 0.91
CTHRC1-201ENST00000330295 EYA1Q99502 592 aa20.74■□□□□ 0.91
CTHRC1-201ENST00000330295 CARD11Q9BXL7 1154 aa20.74■□□□□ 0.91
CTHRC1-201ENST00000330295 TSKSQ9UJT2 592 aa20.74■□□□□ 0.91
CTHRC1-201ENST00000330295 EMILIN1Q9Y6C2 1016 aa20.74■□□□□ 0.91
CTHRC1-201ENST00000330295 LTBP1Q14766 1721 aa20.73■□□□□ 0.91
CTHRC1-201ENST00000330295 PRPF38BQ5VTL8 546 aaKnown RBP20.73■□□□□ 0.91
CTHRC1-201ENST00000330295 INTS5Q6P9B9 1019 aaKnown RBP20.73■□□□□ 0.91
CTHRC1-201ENST00000330295 CNTROBQ8N137 903 aa20.73■□□□□ 0.91
CTHRC1-201ENST00000330295 CAPNS2Q96L46 248 aa20.73■□□□□ 0.91
CTHRC1-201ENST00000330295 ECE1P42892 770 aa20.72■□□□□ 0.91
CTHRC1-201ENST00000330295 ZNF622Q969S3 477 aaKnown RBP eCLIP20.72■□□□□ 0.91
CTHRC1-201ENST00000330295 KIF20BQ96Q89 1820 aa20.71■□□□□ 0.91
CTHRC1-201ENST00000330295 MAP1SQ66K74 1059 aaPredicted RBP20.71■□□□□ 0.91
CTHRC1-201ENST00000330295 GPR101Q96P66 508 aaPredicted RBP20.71■□□□□ 0.91
CTHRC1-201ENST00000330295 CASP8AP2Q9UKL3 1982 aa20.71■□□□□ 0.91
CTHRC1-201ENST00000330295 HSP90AB1P08238 724 aaKnown RBP20.7■□□□□ 0.9
CTHRC1-201ENST00000330295 CABP4P57796 275 aa20.7■□□□□ 0.9
CTHRC1-201ENST00000330295 PAXIP1Q6ZW49 1069 aaPredicted RBP20.7■□□□□ 0.9
CTHRC1-201ENST00000330295 HACL1Q9UJ83 578 aa20.7■□□□□ 0.9
CTHRC1-201ENST00000330295 EPHX2P34913 555 aa20.69■□□□□ 0.9
CTHRC1-201ENST00000330295 DGKZQ13574 1117 aa20.69■□□□□ 0.9
CTHRC1-201ENST00000330295 NARFQ9UHQ1 456 aa20.69■□□□□ 0.9
CTHRC1-201ENST00000330295 SOS1Q07889 1333 aaPredicted RBP20.69■□□□□ 0.9
CTHRC1-201ENST00000330295 ANKRD31Q8N7Z5 1873 aa20.69■□□□□ 0.9
CTHRC1-201ENST00000330295 GRM1Q13255 1194 aa20.68■□□□□ 0.9
CTHRC1-201ENST00000330295 CYP4F22Q6NT55 531 aa20.68■□□□□ 0.9
CTHRC1-201ENST00000330295 PNMA8AQ86V59 439 aaPredicted RBP20.68■□□□□ 0.9
CTHRC1-201ENST00000330295 COL11A2P13942 1736 aaPredicted RBP20.67■□□□□ 0.9
CTHRC1-201ENST00000330295 ANKRD26Q9UPS8 1709 aa20.67■□□□□ 0.9
CTHRC1-201ENST00000330295 PPM1GO15355 546 aaPredicted RBP20.67■□□□□ 0.9
CTHRC1-201ENST00000330295 BCL2L12Q9HB09 334 aa20.67■□□□□ 0.9
CTHRC1-201ENST00000330295 DDX21Q9NR30 783 aaKnown RBP eCLIP20.67■□□□□ 0.9
CTHRC1-201ENST00000330295 PDZRN3Q9UPQ7 1066 aa20.67■□□□□ 0.9
CTHRC1-201ENST00000330295 CA12O43570 354 aa20.66■□□□□ 0.9
CTHRC1-201ENST00000330295 WASHC2AQ641Q2 1341 aa20.66■□□□□ 0.9
CTHRC1-201ENST00000330295 COL15A1P39059 1388 aa20.64■□□□□ 0.89
CTHRC1-201ENST00000330295 ZNF541Q9H0D2 1346 aa20.64■□□□□ 0.89
CTHRC1-201ENST00000330295 PDE6BP35913 854 aa20.64■□□□□ 0.89
CTHRC1-201ENST00000330295 MAP2K2P36507 400 aa20.64■□□□□ 0.89
CTHRC1-201ENST00000330295 SLX4Q8IY92 1834 aa20.63■□□□□ 0.89
CTHRC1-201ENST00000330295 SOGA3Q5TF21 947 aa20.63■□□□□ 0.89
CTHRC1-201ENST00000330295 TESK2Q96S53 571 aa20.63■□□□□ 0.89
CTHRC1-201ENST00000330295 SIN3AQ96ST3 1273 aa20.63■□□□□ 0.89
CTHRC1-201ENST00000330295 CACNA1SQ13698 1873 aa20.62■□□□□ 0.89
CTHRC1-201ENST00000330295 RNF123Q5XPI4 1314 aa20.62■□□□□ 0.89
CTHRC1-201ENST00000330295 SOX10P56693 466 aa20.62■□□□□ 0.89
CTHRC1-201ENST00000330295 DNAJC10Q8IXB1 793 aa20.62■□□□□ 0.89
CTHRC1-201ENST00000330295 BRIP1Q9BX63 1249 aa20.62■□□□□ 0.89
CTHRC1-201ENST00000330295 AOC2O75106 756 aa20.61■□□□□ 0.89
CTHRC1-201ENST00000330295 PPP4R3CPQ6ZMV5 832 aa20.61■□□□□ 0.89
CTHRC1-201ENST00000330295 NFATC2IPQ8NCF5 419 aa20.61■□□□□ 0.89
CTHRC1-201ENST00000330295 BICDL1Q6ZP65 573 aa20.6■□□□□ 0.89
CTHRC1-201ENST00000330295 CNKSR1Q969H4 720 aa20.6■□□□□ 0.89
CTHRC1-201ENST00000330295 ARFGEF2Q9Y6D5 1785 aa20.59■□□□□ 0.89
CTHRC1-201ENST00000330295 FMR1Q06787 632 aaKnown RBP eCLIP20.59■□□□□ 0.89
CTHRC1-201ENST00000330295 PRPF40BQ6NWY9 871 aaKnown RBP20.59■□□□□ 0.89
CTHRC1-201ENST00000330295 ZNF530Q6P9A1 599 aaPredicted RBP20.59■□□□□ 0.89
CTHRC1-201ENST00000330295 TRPM7Q96QT4 1865 aa20.58■□□□□ 0.89
CTHRC1-201ENST00000330295 ST20-MTHFSA0A0A6YYL1 179 aa20.58■□□□□ 0.89
CTHRC1-201ENST00000330295 MTHFSP49914 203 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms