RNA–Protein interactions for RNA: ENST00000329913.3

GDF3-201, Transcript of growth differentiation factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF3, Length 1,239 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3-201ENST00000329913 BRCA1P38398 1863 aaKnown RBP12.87□□□□□ -0.35
GDF3-201ENST00000329913 HMGB2P26583 209 aaKnown RBP12.87□□□□□ -0.35
GDF3-201ENST00000329913 RC3H1Q5TC82 1133 aaKnown RBP12.87□□□□□ -0.35
GDF3-201ENST00000329913 LGR6Q9HBX8 967 aa12.87□□□□□ -0.35
GDF3-201ENST00000329913 RNF181Q9P0P0 153 aa12.87□□□□□ -0.35
GDF3-201ENST00000329913 USP42Q9H9J4 1324 aaKnown RBP12.87□□□□□ -0.35
GDF3-201ENST00000329913 HSP90AB1P08238 724 aaKnown RBP12.86□□□□□ -0.35
GDF3-201ENST00000329913 HMOX1P09601 288 aa12.86□□□□□ -0.35
GDF3-201ENST00000329913 USPL1Q5W0Q7 1092 aa12.86□□□□□ -0.35
GDF3-201ENST00000329913 INTS5Q6P9B9 1019 aaKnown RBP12.86□□□□□ -0.35
GDF3-201ENST00000329913 POLRMTO00411 1230 aaKnown RBP12.85□□□□□ -0.35
GDF3-201ENST00000329913 TOMM70O94826 608 aa12.85□□□□□ -0.35
GDF3-201ENST00000329913 APLP1P51693 650 aa12.85□□□□□ -0.35
GDF3-201ENST00000329913 DALRD3Q5D0E6 543 aaKnown RBP12.85□□□□□ -0.35
GDF3-201ENST00000329913 PIM2Q9P1W9 311 aa12.85□□□□□ -0.35
GDF3-201ENST00000329913 ZNF831Q5JPB2 1677 aa12.84□□□□□ -0.35
GDF3-201ENST00000329913 ADAMTS7Q9UKP4 1686 aa12.84□□□□□ -0.35
GDF3-201ENST00000329913 IL13P35225 146 aa12.84□□□□□ -0.35
GDF3-201ENST00000329913 PRELPP51888 382 aa12.84□□□□□ -0.35
GDF3-201ENST00000329913 AMOTQ4VCS5 1084 aa12.84□□□□□ -0.35
GDF3-201ENST00000329913 CCDC24Q8N4L8 307 aa12.84□□□□□ -0.35
GDF3-201ENST00000329913 DNAJC5GQ8N7S2 189 aa12.84□□□□□ -0.35
GDF3-201ENST00000329913 RRAGCQ9HB90 399 aa12.84□□□□□ -0.35
GDF3-201ENST00000329913 FBXO3Q9UK99 471 aa12.84□□□□□ -0.35
GDF3-201ENST00000329913 WDR90Q96KV7 1748 aa12.84□□□□□ -0.35
GDF3-201ENST00000329913 CARMIL3Q8ND23 1372 aa12.83□□□□□ -0.36
GDF3-201ENST00000329913 EIF4G2P78344 907 aaKnown RBP eCLIP12.83□□□□□ -0.36
GDF3-201ENST00000329913 ZBTB1Q9Y2K1 713 aa12.83□□□□□ -0.36
GDF3-201ENST00000329913 SCN11AQ9UI33 1791 aa12.82□□□□□ -0.36
GDF3-201ENST00000329913 BICDL1Q6ZP65 573 aa12.82□□□□□ -0.36
GDF3-201ENST00000329913 C16orf71Q8IYS4 520 aaPredicted RBP12.82□□□□□ -0.36
GDF3-201ENST00000329913 ARFGEF1Q9Y6D6 1849 aa12.82□□□□□ -0.36
GDF3-201ENST00000329913 SOS1Q07889 1333 aaPredicted RBP12.82□□□□□ -0.36
GDF3-201ENST00000329913 CANXP27824 592 aaKnown RBP12.81□□□□□ -0.36
GDF3-201ENST00000329913 NFIXQ14938 502 aa12.81□□□□□ -0.36
GDF3-201ENST00000329913 SLC52A2Q9HAB3 445 aa12.81□□□□□ -0.36
GDF3-201ENST00000329913 BCL2L12Q9HB09 334 aa12.81□□□□□ -0.36
GDF3-201ENST00000329913 COL15A1P39059 1388 aa12.81□□□□□ -0.36
GDF3-201ENST00000329913 ZPR1O75312 459 aa12.8□□□□□ -0.36
GDF3-201ENST00000329913 CYP19A1P11511 503 aaPredicted RBP12.8□□□□□ -0.36
GDF3-201ENST00000329913 TM4SF1P30408 202 aa12.8□□□□□ -0.36
GDF3-201ENST00000329913 CC2D1BQ5T0F9 858 aaKnown RBP12.8□□□□□ -0.36
GDF3-201ENST00000329913 ZNF330Q9Y3S2 320 aaPredicted RBP12.8□□□□□ -0.36
GDF3-201ENST00000329913 AFDNP55196 1824 aaKnown RBP12.79□□□□□ -0.36
GDF3-201ENST00000329913 RNMTO43148 476 aaKnown RBP12.79□□□□□ -0.36
GDF3-201ENST00000329913 MTHFSDQ2M296 383 aaKnown RBP12.79□□□□□ -0.36
GDF3-201ENST00000329913 AKAP4Q5JQC9 854 aa12.79□□□□□ -0.36
GDF3-201ENST00000329913 COL13A1Q5TAT6 717 aaPredicted RBP12.79□□□□□ -0.36
GDF3-201ENST00000329913 RBM46Q8TBY0 533 aaKnown RBP12.79□□□□□ -0.36
GDF3-201ENST00000329913 KNSTRNQ9Y448 316 aa12.79□□□□□ -0.36
GDF3-201ENST00000329913 PLEKHG2Q9H7P9 1386 aa12.79□□□□□ -0.36
GDF3-201ENST00000329913 VIRMAQ69YN4 1812 aaKnown RBP12.77□□□□□ -0.37
GDF3-201ENST00000329913 SERPINB2P05120 415 aa12.77□□□□□ -0.37
GDF3-201ENST00000329913 AMER1Q5JTC6 1135 aaPredicted RBP12.77□□□□□ -0.37
GDF3-201ENST00000329913 C2CD5Q86YS7 1000 aa12.77□□□□□ -0.37
GDF3-201ENST00000329913 KLRG1Q96E93 195 aa12.77□□□□□ -0.37
GDF3-201ENST00000329913 KDM2BQ8NHM5 1336 aa12.77□□□□□ -0.37
GDF3-201ENST00000329913 MRC1P22897 1456 aa12.77□□□□□ -0.37
GDF3-201ENST00000329913 SBF1O95248 1867 aa12.76□□□□□ -0.37
GDF3-201ENST00000329913 PIP4K2AP48426 406 aaPredicted RBP12.76□□□□□ -0.37
GDF3-201ENST00000329913 NARFQ9UHQ1 456 aa12.76□□□□□ -0.37
GDF3-201ENST00000329913 KIF7Q2M1P5 1343 aa12.76□□□□□ -0.37
GDF3-201ENST00000329913 TIAM2Q8IVF5 1701 aa12.76□□□□□ -0.37
GDF3-201ENST00000329913 NFKBIEO00221 500 aa12.75□□□□□ -0.37
GDF3-201ENST00000329913 TBC1D9BQ66K14 1250 aa12.75□□□□□ -0.37
GDF3-201ENST00000329913 TNRC6CQ9HCJ0 1690 aaKnown RBP12.75□□□□□ -0.37
GDF3-201ENST00000329913 TIMELESSQ9UNS1 1208 aa12.75□□□□□ -0.37
GDF3-201ENST00000329913 COL11A2P13942 1736 aaPredicted RBP12.74□□□□□ -0.37
GDF3-201ENST00000329913 U2SURPO15042 1029 aaKnown RBP12.74□□□□□ -0.37
GDF3-201ENST00000329913 CCER1Q8TC90 406 aaPredicted RBP12.74□□□□□ -0.37
GDF3-201ENST00000329913 ZNF622Q969S3 477 aaKnown RBP eCLIP12.74□□□□□ -0.37
GDF3-201ENST00000329913 TBC1D2BQ9UPU7 963 aa12.74□□□□□ -0.37
GDF3-201ENST00000329913 NRXN2Q9P2S2 1712 aa12.74□□□□□ -0.37
GDF3-201ENST00000329913 KCNQ3O43525 872 aa12.73□□□□□ -0.37
GDF3-201ENST00000329913 C21orf2O43822 256 aa12.73□□□□□ -0.37
GDF3-201ENST00000329913 TTLL6Q8N841 843 aa12.73□□□□□ -0.37
GDF3-201ENST00000329913 ZNF496Q96IT1 587 aaPredicted RBP12.73□□□□□ -0.37
GDF3-201ENST00000329913 ANKRD31Q8N7Z5 1873 aa12.72□□□□□ -0.37
GDF3-201ENST00000329913 DLEC1Q9Y238 1755 aa12.72□□□□□ -0.37
GDF3-201ENST00000329913 DIAPH1O60610 1272 aaKnown RBP12.72□□□□□ -0.37
GDF3-201ENST00000329913 LMNB1P20700 586 aa12.72□□□□□ -0.37
GDF3-201ENST00000329913 FSTL1Q12841 308 aa12.72□□□□□ -0.37
GDF3-201ENST00000329913 TTC5Q8N0Z6 440 aa12.72□□□□□ -0.37
GDF3-201ENST00000329913 SMC1BQ8NDV3 1235 aa12.72□□□□□ -0.37
GDF3-201ENST00000329913 UBR2Q8IWV8 1755 aa12.71□□□□□ -0.37
GDF3-201ENST00000329913 PRAMEF22A3QJZ6 481 aa12.71□□□□□ -0.37
GDF3-201ENST00000329913 H0YIN7 160 aa12.71□□□□□ -0.37
GDF3-201ENST00000329913 A1BGP04217 495 aa12.71□□□□□ -0.37
GDF3-201ENST00000329913 POTEIP0CG38 1075 aa12.71□□□□□ -0.37
GDF3-201ENST00000329913 POTEJP0CG39 1038 aa12.71□□□□□ -0.37
GDF3-201ENST00000329913 CCDC88AQ3V6T2 1871 aa12.71□□□□□ -0.37
GDF3-201ENST00000329913 COL3A1P02461 1466 aaPredicted RBP12.71□□□□□ -0.38
GDF3-201ENST00000329913 SCN7AQ01118 1682 aa12.7□□□□□ -0.38
GDF3-201ENST00000329913 GLTPD2A6NH11 291 aa12.7□□□□□ -0.38
GDF3-201ENST00000329913 POTECB2RU33 542 aa12.7□□□□□ -0.38
GDF3-201ENST00000329913 EIF5P55010 431 aaKnown RBP12.7□□□□□ -0.38
GDF3-201ENST00000329913 PRR5LQ6MZQ0 368 aa12.7□□□□□ -0.38
GDF3-201ENST00000329913 JMYQ8N9B5 988 aa12.7□□□□□ -0.38
GDF3-201ENST00000329913 IL17REQ8NFR9 667 aa12.7□□□□□ -0.38
GDF3-201ENST00000329913 CACNA1SQ13698 1873 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms