RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 CABP4P57796 275 aa6.22□□□□□ -1.41
SDR42E1-201ENST00000328945 NGLY1Q96IV0 654 aa6.22□□□□□ -1.41
SDR42E1-201ENST00000328945 CDKL5O76039 1030 aa6.22□□□□□ -1.41
SDR42E1-201ENST00000328945 PPP2R1AP30153 589 aa6.22□□□□□ -1.41
SDR42E1-201ENST00000328945 CLNS1AP54105 237 aaKnown RBP6.22□□□□□ -1.41
SDR42E1-201ENST00000328945 UBE2HP62256 183 aa6.22□□□□□ -1.41
SDR42E1-201ENST00000328945 FAM114A1Q8IWE2 563 aa6.22□□□□□ -1.41
SDR42E1-201ENST00000328945 TRMT1Q9NXH9 659 aaKnown RBP6.22□□□□□ -1.41
SDR42E1-201ENST00000328945 CTCFLQ8NI51 663 aaPredicted RBP6.21□□□□□ -1.41
SDR42E1-201ENST00000328945 TBC1D2BQ9UPU7 963 aa6.21□□□□□ -1.41
SDR42E1-201ENST00000328945 LRCH2Q5VUJ6 765 aa6.21□□□□□ -1.41
SDR42E1-201ENST00000328945 CCDC50Q8IVM0 306 aa6.21□□□□□ -1.41
SDR42E1-201ENST00000328945 TCP11L2Q8N4U5 519 aa6.21□□□□□ -1.41
SDR42E1-201ENST00000328945 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.21□□□□□ -1.41
SDR42E1-201ENST00000328945 MPHOSPH10O00566 681 aaKnown RBP6.21□□□□□ -1.41
SDR42E1-201ENST00000328945 DRC1Q96MC2 740 aa6.21□□□□□ -1.41
SDR42E1-201ENST00000328945 OPA1O60313 960 aa6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 SKILP12757 684 aa6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 C6orf163Q5TEZ5 329 aa6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 ATF7IPQ6VMQ6 1270 aa6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 KRBA2Q6ZNG9 492 aa6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 THEMISQ8N1K5 641 aaPredicted RBP6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 SCLT1Q96NL6 688 aa6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 GOLGA1Q92805 767 aa6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 HYPKQ9NX55 129 aa6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 ZNF219Q9P2Y4 722 aaPredicted RBP6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 FMNL3Q8IVF7 1028 aa6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 CCDC12Q8WUD4 166 aaPredicted RBP6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 NUP133Q8WUM0 1156 aa6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 RAI14Q9P0K7 980 aa6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 PPM1FP49593 454 aaPredicted RBP6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 SPINK5Q9NQ38 1064 aaPredicted RBP6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 CEP83Q9Y592 693 aa6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 MAATS1Q7Z4T9 603 aa6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 NOB1Q9ULX3 412 aaKnown RBP6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 HSF2BPO75031 334 aa6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 TMC6Q7Z403 805 aa6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 ZNF622Q969S3 477 aaKnown RBP eCLIP6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 MRVI1Q9Y6F6 885 aa6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 HFM1A2PYH4 1435 aa6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 ATAD2Q6PL18 1390 aa6.21□□□□□ -1.42
SDR42E1-201ENST00000328945 ANKRD62A6NC57 917 aa6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 GRM1Q13255 1194 aa6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 NAA15Q9BXJ9 866 aaKnown RBP6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 TUBBP07437 444 aa6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 CASTP20810 708 aaKnown RBP6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 WDR63Q8IWG1 891 aa6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 GTF3C6Q969F1 213 aa6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 CCDC97Q96F63 343 aaPredicted RBP6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 MKRN1Q9UHC7 482 aaKnown RBP6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 B4GALNT4Q76KP1 1039 aa6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 ZNF526Q8TF50 670 aaPredicted RBP6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 SYCP1Q15431 976 aa6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 MPHOSPH8Q99549 860 aa6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 HCLS1P14317 486 aaPredicted RBP6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 CKAP4Q07065 602 aaKnown RBP6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 CKAP2LQ8IYA6 745 aa6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 RNF168Q8IYW5 571 aaPredicted RBP6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 VPS18Q9P253 973 aa6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 KRT32Q14532 448 aa6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 ZSCAN29Q8IWY8 852 aaPredicted RBP6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 GGNBP2Q9H3C7 697 aa6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 KIF5BP33176 963 aa6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 ATP6V1AP38606 617 aa6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 CDK5RAP3Q96JB5 506 aa6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 YEATS4O95619 227 aa6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 ATP2B1P20020 1258 aa6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 EIF5P55010 431 aaKnown RBP6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 RBM27Q9P2N5 1060 aaKnown RBP6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 GNG11P61952 73 aa6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 FAM76AQ8TAV0 307 aa6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 C1orf115Q9H7X2 142 aa6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 TOPBP1Q92547 1522 aa6.2□□□□□ -1.42
SDR42E1-201ENST00000328945 ZNF165P49910 485 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 ZNF530Q6P9A1 599 aaPredicted RBP6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 CCDC114Q96M63 670 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 ABCA10Q8WWZ4 1543 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 TRIM22Q8IYM9 498 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 OTUD6BQ8N6M0 293 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 FBF1Q8TES7 1133 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 CTAGE15A4D2H0 777 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 CTAGE8P0CG41 777 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 MATR3P43243 847 aaKnown RBP eCLIP6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 TTC39AQ5SRH9 613 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 CTAGE6Q86UF2 777 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 CTAGE4Q8IX94 777 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 HDXQ7Z353 690 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 MIPOL1Q8TD10 442 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 ERO1AQ96HE7 468 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 MYL6BP14649 208 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 MCM6Q14566 821 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 GOLIM4O00461 696 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 TMEM87AQ8NBN3 555 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 TMOD2Q9NZR1 351 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 ZPR1O75312 459 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 GNAI2P04899 355 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 NBPF8Q3BBV2 869 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 BMP2KLQ5H9B9 411 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 CCDC113Q9H0I3 377 aa6.19□□□□□ -1.42
SDR42E1-201ENST00000328945 DNAJC21Q5F1R6 531 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms