RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 APBB1IPQ7Z5R6 666 aaPredicted RBP19.03■□□□□ 0.64
SMAD3-201ENST00000327367 PPM1EQ8WY54 764 aa19.03■□□□□ 0.64
SMAD3-201ENST00000327367 PSMD1Q99460 953 aa19.03■□□□□ 0.64
SMAD3-201ENST00000327367 MXRA7P84157 204 aa19.02■□□□□ 0.64
SMAD3-201ENST00000327367 C8orf76Q96K31 380 aa19.02■□□□□ 0.64
SMAD3-201ENST00000327367 NAA15Q9BXJ9 866 aaKnown RBP19.02■□□□□ 0.63
SMAD3-201ENST00000327367 KRT32Q14532 448 aa19.02■□□□□ 0.63
SMAD3-201ENST00000327367 DAAM2Q86T65 1068 aa19.02■□□□□ 0.63
SMAD3-201ENST00000327367 C6orf163Q5TEZ5 329 aa19.01■□□□□ 0.63
SMAD3-201ENST00000327367 SKILP12757 684 aa19.01■□□□□ 0.63
SMAD3-201ENST00000327367 SULT6B1Q6IMI4 303 aa19.01■□□□□ 0.63
SMAD3-201ENST00000327367 MIS18AQ9NYP9 233 aa19.01■□□□□ 0.63
SMAD3-201ENST00000327367 HOOK3Q86VS8 718 aa19.01■□□□□ 0.63
SMAD3-201ENST00000327367 RAB11FIP4Q86YS3 637 aa19.01■□□□□ 0.63
SMAD3-201ENST00000327367 TSG101Q99816 390 aa19.01■□□□□ 0.63
SMAD3-201ENST00000327367 ANO6Q4KMQ2 910 aa19.01■□□□□ 0.63
SMAD3-201ENST00000327367 ZNF644Q9H582 1327 aaPredicted RBP19■□□□□ 0.63
SMAD3-201ENST00000327367 ZEB2O60315 1214 aa19■□□□□ 0.63
SMAD3-201ENST00000327367 MX1P20591 662 aa19■□□□□ 0.63
SMAD3-201ENST00000327367 IDH1O75874 414 aaKnown RBP19■□□□□ 0.63
SMAD3-201ENST00000327367 MTIF2P46199 727 aaKnown RBP19■□□□□ 0.63
SMAD3-201ENST00000327367 NLRP6P59044 892 aa19■□□□□ 0.63
SMAD3-201ENST00000327367 A0A1W2PRG0 241 aa19■□□□□ 0.63
SMAD3-201ENST00000327367 GAS2L2Q8NHY3 880 aa19■□□□□ 0.63
SMAD3-201ENST00000327367 WASF1Q92558 559 aa19■□□□□ 0.63
SMAD3-201ENST00000327367 BOLA2Q9H3K6 86 aa19■□□□□ 0.63
SMAD3-201ENST00000327367 CCDC171Q6TFL3 1326 aa19■□□□□ 0.63
SMAD3-201ENST00000327367 CETN2P41208 172 aa18.99■□□□□ 0.63
SMAD3-201ENST00000327367 CCDC121Q6ZUS5 278 aa18.99■□□□□ 0.63
SMAD3-201ENST00000327367 CCDC144CPQ8IYA2 1237 aa18.99■□□□□ 0.63
SMAD3-201ENST00000327367 HOMER2Q9NSB8 354 aa18.99■□□□□ 0.63
SMAD3-201ENST00000327367 POLR3DP05423 398 aaPredicted RBP18.99■□□□□ 0.63
SMAD3-201ENST00000327367 GBP6Q6ZN66 633 aa18.99■□□□□ 0.63
SMAD3-201ENST00000327367 RASSF4Q9H2L5 321 aa18.99■□□□□ 0.63
SMAD3-201ENST00000327367 OTUD6BQ8N6M0 293 aa18.99■□□□□ 0.63
SMAD3-201ENST00000327367 WDR63Q8IWG1 891 aa18.99■□□□□ 0.63
SMAD3-201ENST00000327367 SELENOSQ9BQE4 189 aa18.99■□□□□ 0.63
SMAD3-201ENST00000327367 RAB11FIP3O75154 756 aa18.99■□□□□ 0.63
SMAD3-201ENST00000327367 ARID4AP29374 1257 aaPredicted RBP18.99■□□□□ 0.63
SMAD3-201ENST00000327367 SMIM23A6NLE4 172 aa18.98■□□□□ 0.63
SMAD3-201ENST00000327367 DDX19AQ9NUU7 478 aaKnown RBP18.98■□□□□ 0.63
SMAD3-201ENST00000327367 CNPY2Q9Y2B0 182 aa18.98■□□□□ 0.63
SMAD3-201ENST00000327367 CTAGE5O15320 804 aa18.98■□□□□ 0.63
SMAD3-201ENST00000327367 STX6O43752 255 aa18.98■□□□□ 0.63
SMAD3-201ENST00000327367 PPARDQ03181 441 aa18.98■□□□□ 0.63
SMAD3-201ENST00000327367 CAPZA3Q96KX2 299 aa18.98■□□□□ 0.63
SMAD3-201ENST00000327367 SLFN5Q08AF3 891 aa18.98■□□□□ 0.63
SMAD3-201ENST00000327367 KLHL40Q2TBA0 621 aa18.98■□□□□ 0.63
SMAD3-201ENST00000327367 PUF60Q9UHX1 559 aaKnown RBP18.98■□□□□ 0.63
SMAD3-201ENST00000327367 CCDC150Q8NCX0 1101 aa18.98■□□□□ 0.63
SMAD3-201ENST00000327367 SPG7Q9UQ90 795 aa18.98■□□□□ 0.63
SMAD3-201ENST00000327367 FSD2A1L4K1 749 aa18.97■□□□□ 0.63
SMAD3-201ENST00000327367 CTNNA3Q9UI47 895 aa18.97■□□□□ 0.63
SMAD3-201ENST00000327367 CTNNA2P26232 953 aa18.97■□□□□ 0.63
SMAD3-201ENST00000327367 RABEP2Q9H5N1 569 aa18.97■□□□□ 0.63
SMAD3-201ENST00000327367 U2AF2P26368 475 aaKnown RBP eCLIP18.97■□□□□ 0.634e-6■■■□□ 18.9
SMAD3-201ENST00000327367 GNL3LQ9NVN8 582 aaKnown RBP18.97■□□□□ 0.63
SMAD3-201ENST00000327367 POTEJP0CG39 1038 aa18.97■□□□□ 0.63
SMAD3-201ENST00000327367 VPS36Q86VN1 386 aa18.97■□□□□ 0.63
SMAD3-201ENST00000327367 MIA2Q96PC5 1412 aa18.97■□□□□ 0.63
SMAD3-201ENST00000327367 CTAGE15A4D2H0 777 aa18.96■□□□□ 0.63
SMAD3-201ENST00000327367 RHOXF2BP0C7M4 288 aa18.96■□□□□ 0.63
SMAD3-201ENST00000327367 CTAGE8P0CG41 777 aa18.96■□□□□ 0.63
SMAD3-201ENST00000327367 UVSSAQ2YD98 709 aa18.96■□□□□ 0.63
SMAD3-201ENST00000327367 TSHZ3Q63HK5 1081 aa18.96■□□□□ 0.63
SMAD3-201ENST00000327367 CTAGE6Q86UF2 777 aa18.96■□□□□ 0.63
SMAD3-201ENST00000327367 CTAGE4Q8IX94 777 aa18.96■□□□□ 0.63
SMAD3-201ENST00000327367 RHOXF2Q9BQY4 288 aa18.96■□□□□ 0.63
SMAD3-201ENST00000327367 LIMCH1Q9UPQ0 1083 aa18.96■□□□□ 0.63
SMAD3-201ENST00000327367 THUMPD2Q9BTF0 503 aaKnown RBP18.96■□□□□ 0.63
SMAD3-201ENST00000327367 SLC12A5Q9H2X9 1139 aa18.96■□□□□ 0.63
SMAD3-201ENST00000327367 CEP83Q9Y592 693 aa18.96■□□□□ 0.63
SMAD3-201ENST00000327367 BAZ1AQ9NRL2 1556 aaPredicted RBP18.96■□□□□ 0.63
SMAD3-201ENST00000327367 TAOK3Q9H2K8 898 aa18.96■□□□□ 0.63
SMAD3-201ENST00000327367 PTGS1P23219 599 aa18.96■□□□□ 0.63
SMAD3-201ENST00000327367 CCDC114Q96M63 670 aa18.96■□□□□ 0.63
SMAD3-201ENST00000327367 PPP1R12BO60237 982 aaPredicted RBP18.95■□□□□ 0.62
SMAD3-201ENST00000327367 NAP1L3Q99457 506 aaPredicted RBP18.95■□□□□ 0.62
SMAD3-201ENST00000327367 ZKSCAN5Q9Y2L8 839 aa18.95■□□□□ 0.62
SMAD3-201ENST00000327367 PRIM1P49642 420 aaKnown RBP18.95■□□□□ 0.62
SMAD3-201ENST00000327367 TBC1D9Q6ZT07 1266 aa18.95■□□□□ 0.62
SMAD3-201ENST00000327367 DESP17661 470 aa18.95■□□□□ 0.62
SMAD3-201ENST00000327367 UBASH3AP57075 661 aa18.95■□□□□ 0.62
SMAD3-201ENST00000327367 CFAP70Q5T0N1 1121 aa18.95■□□□□ 0.62
SMAD3-201ENST00000327367 ZSCAN25Q6NSZ9 544 aa18.95■□□□□ 0.62
SMAD3-201ENST00000327367 MMRN2Q9H8L6 949 aa18.95■□□□□ 0.62
SMAD3-201ENST00000327367 KIF4AO95239 1232 aa18.95■□□□□ 0.62
SMAD3-201ENST00000327367 PPP1R14CQ8TAE6 165 aa18.95■□□□□ 0.62
SMAD3-201ENST00000327367 SLU7O95391 586 aaKnown RBP18.94■□□□□ 0.62
SMAD3-201ENST00000327367 KARSQ15046 597 aaKnown RBP18.94■□□□□ 0.62
SMAD3-201ENST00000327367 DDX23Q9BUQ8 820 aaKnown RBP18.94■□□□□ 0.62
SMAD3-201ENST00000327367 MINDY4BA8MYZ0 360 aa18.94■□□□□ 0.62
SMAD3-201ENST00000327367 RRAGDQ9NQL2 400 aaPredicted RBP18.94■□□□□ 0.62
SMAD3-201ENST00000327367 RBM5P52756 815 aaKnown RBP eCLIP18.94■□□□□ 0.62
SMAD3-201ENST00000327367 UBE2HP62256 183 aa18.94■□□□□ 0.62
SMAD3-201ENST00000327367 EBAG9O00559 213 aa18.94■□□□□ 0.62
SMAD3-201ENST00000327367 SMAP1Q8IYB5 467 aaPredicted RBP18.94■□□□□ 0.62
SMAD3-201ENST00000327367 AIDAQ96BJ3 306 aa18.94■□□□□ 0.62
SMAD3-201ENST00000327367 GOLGA6L9A6NEM1 432 aa18.93■□□□□ 0.62
SMAD3-201ENST00000327367 NBPF8Q3BBV2 869 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms