RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 NARFQ9UHQ1 456 aa18.9■□□□□ 0.62
RPAIN-201ENST00000327154 POLRMTO00411 1230 aaKnown RBP18.89■□□□□ 0.61
RPAIN-201ENST00000327154 FCHSD2O94868 740 aa18.89■□□□□ 0.61
RPAIN-201ENST00000327154 ARHGAP27Q6ZUM4 889 aa18.89■□□□□ 0.61
RPAIN-201ENST00000327154 ZNF526Q8TF50 670 aaPredicted RBP18.89■□□□□ 0.61
RPAIN-201ENST00000327154 ADAMTS7Q9UKP4 1686 aa18.89■□□□□ 0.61
RPAIN-201ENST00000327154 C4AP0C0L4 1744 aa18.88■□□□□ 0.61
RPAIN-201ENST00000327154 GPBP1L1Q9HC44 474 aaPredicted RBP18.88■□□□□ 0.61
RPAIN-201ENST00000327154 SENP3-EIF4A1A0A087X0R7 540 aa18.87■□□□□ 0.61
RPAIN-201ENST00000327154 BTBD11A6QL63 1104 aa18.87■□□□□ 0.61
RPAIN-201ENST00000327154 COL15A1P39059 1388 aa18.87■□□□□ 0.61
RPAIN-201ENST00000327154 NFIXQ14938 502 aa18.87■□□□□ 0.61
RPAIN-201ENST00000327154 TEX13AQ9BXU3 409 aaPredicted RBP18.87■□□□□ 0.61
RPAIN-201ENST00000327154 BCL2L12Q9HB09 334 aa18.87■□□□□ 0.61
RPAIN-201ENST00000327154 PIM2Q9P1W9 311 aa18.87■□□□□ 0.61
RPAIN-201ENST00000327154 ADCY9O60503 1353 aa18.86■□□□□ 0.61
RPAIN-201ENST00000327154 CEMIPQ8WUJ3 1361 aa18.86■□□□□ 0.61
RPAIN-201ENST00000327154 KCNQ3O43525 872 aa18.86■□□□□ 0.61
RPAIN-201ENST00000327154 EIF5P55010 431 aaKnown RBP18.86■□□□□ 0.61
RPAIN-201ENST00000327154 FMNL2Q96PY5 1086 aa18.86■□□□□ 0.61
RPAIN-201ENST00000327154 HEG1Q9ULI3 1381 aa18.85■□□□□ 0.61
RPAIN-201ENST00000327154 CHRNA5P30532 468 aa18.85■□□□□ 0.61
RPAIN-201ENST00000327154 KIF13BQ9NQT8 1826 aa18.85■□□□□ 0.61
RPAIN-201ENST00000327154 N4BP2Q86UW6 1770 aaPredicted RBP18.84■□□□□ 0.61
RPAIN-201ENST00000327154 DALRD3Q5D0E6 543 aaKnown RBP18.84■□□□□ 0.61
RPAIN-201ENST00000327154 MCM10Q7L590 875 aa18.84■□□□□ 0.61
RPAIN-201ENST00000327154 RTF1Q92541 710 aaKnown RBP18.84■□□□□ 0.61
RPAIN-201ENST00000327154 A0A087WZG4 1122 aa18.83■□□□□ 0.6
RPAIN-201ENST00000327154 A1BGP04217 495 aa18.83■□□□□ 0.6
RPAIN-201ENST00000327154 SERPINB2P05120 415 aa18.83■□□□□ 0.6
RPAIN-201ENST00000327154 BICDL1Q6ZP65 573 aa18.83■□□□□ 0.6
RPAIN-201ENST00000327154 ZNF330Q9Y3S2 320 aaPredicted RBP18.83■□□□□ 0.6
RPAIN-201ENST00000327154 KIAA1551Q9HCM1 1747 aa18.83■□□□□ 0.6
RPAIN-201ENST00000327154 DCTN1Q14203 1278 aa18.82■□□□□ 0.6
RPAIN-201ENST00000327154 TBC1D2BQ9UPU7 963 aa18.82■□□□□ 0.6
RPAIN-201ENST00000327154 VIRMAQ69YN4 1812 aaKnown RBP18.81■□□□□ 0.6
RPAIN-201ENST00000327154 IL6STP40189 918 aaPredicted RBP18.8■□□□□ 0.6
RPAIN-201ENST00000327154 USP16Q9Y5T5 823 aa18.8■□□□□ 0.6
RPAIN-201ENST00000327154 UBR2Q8IWV8 1755 aa18.79■□□□□ 0.6
RPAIN-201ENST00000327154 HTATSF1O43719 755 aaKnown RBP18.79■□□□□ 0.6
RPAIN-201ENST00000327154 TBC1D9BQ66K14 1250 aa18.79■□□□□ 0.6
RPAIN-201ENST00000327154 PRAMEF22A3QJZ6 481 aa18.78■□□□□ 0.6
RPAIN-201ENST00000327154 NPM2Q86SE8 214 aaKnown RBP18.78■□□□□ 0.6
RPAIN-201ENST00000327154 C9orf131Q5VYM1 1079 aa18.77■□□□□ 0.6
RPAIN-201ENST00000327154 NEFMP07197 916 aa18.76■□□□□ 0.59
RPAIN-201ENST00000327154 SNRPA1P09661 255 aaKnown RBP18.76■□□□□ 0.59
RPAIN-201ENST00000327154 PIP4K2AP48426 406 aaPredicted RBP18.76■□□□□ 0.59
RPAIN-201ENST00000327154 TAF7Q15545 349 aaPredicted RBP18.76■□□□□ 0.59
RPAIN-201ENST00000327154 C2CD5Q86YS7 1000 aa18.76■□□□□ 0.59
RPAIN-201ENST00000327154 MIS18AQ9NYP9 233 aa18.76■□□□□ 0.59
RPAIN-201ENST00000327154 KIF3CO14782 793 aa18.75■□□□□ 0.59
RPAIN-201ENST00000327154 SIPA1L3O60292 1781 aaPredicted RBP18.75■□□□□ 0.59
RPAIN-201ENST00000327154 H0YIN7 160 aa18.74■□□□□ 0.59
RPAIN-201ENST00000327154 CAMTA2O94983 1202 aa18.74■□□□□ 0.59
RPAIN-201ENST00000327154 DZIP3Q86Y13 1208 aaKnown RBP18.74■□□□□ 0.59
RPAIN-201ENST00000327154 PLEKHF1Q96S99 279 aa18.74■□□□□ 0.59
RPAIN-201ENST00000327154 CCDC24Q8N4L8 307 aa18.73■□□□□ 0.59
RPAIN-201ENST00000327154 TTLL6Q8N841 843 aa18.73■□□□□ 0.59
RPAIN-201ENST00000327154 SETDB2Q96T68 719 aa18.73■□□□□ 0.59
RPAIN-201ENST00000327154 CARMIL3Q8ND23 1372 aa18.72■□□□□ 0.59
RPAIN-201ENST00000327154 BRIP1Q9BX63 1249 aa18.72■□□□□ 0.59
RPAIN-201ENST00000327154 RNF181Q9P0P0 153 aa18.72■□□□□ 0.59
RPAIN-201ENST00000327154 BRCA1P38398 1863 aaKnown RBP18.71■□□□□ 0.59
RPAIN-201ENST00000327154 PRR5LQ6MZQ0 368 aa18.71■□□□□ 0.59
RPAIN-201ENST00000327154 NBPF26B4DH59 902 aa18.7■□□□□ 0.58
RPAIN-201ENST00000327154 PDE6BP35913 854 aa18.7■□□□□ 0.58
RPAIN-201ENST00000327154 NFE2L2Q16236 605 aa18.7■□□□□ 0.58
RPAIN-201ENST00000327154 NBPF10Q6P3W6 841 aaKnown RBP18.7■□□□□ 0.58
RPAIN-201ENST00000327154 NBPF15Q8N660 670 aa18.7■□□□□ 0.58
RPAIN-201ENST00000327154 ZNF622Q969S3 477 aaKnown RBP eCLIP18.7■□□□□ 0.58
RPAIN-201ENST00000327154 PNNQ9H307 717 aaKnown RBP18.7■□□□□ 0.58
RPAIN-201ENST00000327154 NMRK2Q9NPI5 230 aa18.7■□□□□ 0.58
RPAIN-201ENST00000327154 NPHP1O15259 732 aa18.69■□□□□ 0.58
RPAIN-201ENST00000327154 RASSF7Q02833 373 aa18.69■□□□□ 0.58
RPAIN-201ENST00000327154 DDX10Q13206 875 aaKnown RBP18.69■□□□□ 0.58
RPAIN-201ENST00000327154 RALBP1Q15311 655 aa18.69■□□□□ 0.58
RPAIN-201ENST00000327154 PNISRQ8TF01 805 aaKnown RBP18.69■□□□□ 0.58
RPAIN-201ENST00000327154 THUMPD2Q9BTF0 503 aaKnown RBP18.69■□□□□ 0.58
RPAIN-201ENST00000327154 AFDNP55196 1824 aaKnown RBP18.69■□□□□ 0.58
RPAIN-201ENST00000327154 NRXN2Q9P2S2 1712 aa18.69■□□□□ 0.58
RPAIN-201ENST00000327154 HSPA6P17066 643 aa18.68■□□□□ 0.58
RPAIN-201ENST00000327154 CLEC4GQ6UXB4 293 aa18.68■□□□□ 0.58
RPAIN-201ENST00000327154 CNBD1Q8NA66 436 aa18.68■□□□□ 0.58
RPAIN-201ENST00000327154 PDZRN3Q9UPQ7 1066 aa18.68■□□□□ 0.58
RPAIN-201ENST00000327154 MAPK8IP3Q9UPT6 1336 aa18.68■□□□□ 0.58
RPAIN-201ENST00000327154 ARFGEF1Q9Y6D6 1849 aa18.67■□□□□ 0.58
RPAIN-201ENST00000327154 TOMM70O94826 608 aa18.66■□□□□ 0.58
RPAIN-201ENST00000327154 ST5P78524 1137 aa18.66■□□□□ 0.58
RPAIN-201ENST00000327154 ZNF219Q9P2Y4 722 aaPredicted RBP18.66■□□□□ 0.58
RPAIN-201ENST00000327154 ZNF652Q9Y2D9 606 aa18.66■□□□□ 0.58
RPAIN-201ENST00000327154 LMNB1P20700 586 aa18.65■□□□□ 0.58
RPAIN-201ENST00000327154 PRELPP51888 382 aa18.65■□□□□ 0.58
RPAIN-201ENST00000327154 EIF4A1P60842 406 aaKnown RBP18.65■□□□□ 0.58
RPAIN-201ENST00000327154 NBPF5PQ86XG9 351 aaPredicted RBP18.65■□□□□ 0.58
RPAIN-201ENST00000327154 KDM2BQ8NHM5 1336 aa18.65■□□□□ 0.58
RPAIN-201ENST00000327154 C21orf2O43822 256 aa18.64■□□□□ 0.57
RPAIN-201ENST00000327154 ZEB1P37275 1124 aaPredicted RBP18.64■□□□□ 0.57
RPAIN-201ENST00000327154 NGEFQ8N5V2 710 aa18.64■□□□□ 0.57
RPAIN-201ENST00000327154 RRAGCQ9HB90 399 aa18.64■□□□□ 0.57
RPAIN-201ENST00000327154 NFKBIEO00221 500 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms