RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 ATF7IPQ6VMQ6 1270 aa13.09□□□□□ -0.31
VIPAS39-201ENST00000327028 CHPF2Q9P2E5 772 aa13.09□□□□□ -0.31
VIPAS39-201ENST00000327028 PTPRCP08575 1304 aa13.08□□□□□ -0.32
VIPAS39-201ENST00000327028 MS4A1P11836 297 aa13.08□□□□□ -0.32
VIPAS39-201ENST00000327028 C20orf194Q5TEA3 1177 aa13.08□□□□□ -0.32
VIPAS39-201ENST00000327028 DBF4Q9UBU7 674 aaPredicted RBP13.08□□□□□ -0.32
VIPAS39-201ENST00000327028 ERBB4Q15303 1308 aa13.08□□□□□ -0.32
VIPAS39-201ENST00000327028 TRIM27P14373 513 aa13.08□□□□□ -0.32
VIPAS39-201ENST00000327028 RBM42Q9BTD8 480 aaKnown RBP13.08□□□□□ -0.32
VIPAS39-201ENST00000327028 TEX13AQ9BXU3 409 aaPredicted RBP13.08□□□□□ -0.32
VIPAS39-201ENST00000327028 LY75O60449 1722 aa13.07□□□□□ -0.32
VIPAS39-201ENST00000327028 API5Q9BZZ5 524 aaKnown RBP13.07□□□□□ -0.32
VIPAS39-201ENST00000327028 USP16Q9Y5T5 823 aa13.07□□□□□ -0.32
VIPAS39-201ENST00000327028 PTF1AQ7RTS3 328 aa13.07□□□□□ -0.32
VIPAS39-201ENST00000327028 BCL11BQ9C0K0 894 aaPredicted RBP13.07□□□□□ -0.32
VIPAS39-201ENST00000327028 DDX21Q9NR30 783 aaKnown RBP eCLIP13.07□□□□□ -0.32
VIPAS39-201ENST00000327028 COL5A3P25940 1745 aaPredicted RBP13.06□□□□□ -0.32
VIPAS39-201ENST00000327028 N4BP2Q86UW6 1770 aaPredicted RBP13.06□□□□□ -0.32
VIPAS39-201ENST00000327028 FLIIQ13045 1269 aa13.06□□□□□ -0.32
VIPAS39-201ENST00000327028 ERICH6BQ5W0A0 696 aa13.06□□□□□ -0.32
VIPAS39-201ENST00000327028 G2E3Q7L622 706 aa13.06□□□□□ -0.32
VIPAS39-201ENST00000327028 DZIP1LQ8IYY4 767 aaKnown RBP13.06□□□□□ -0.32
VIPAS39-201ENST00000327028 SLC4A9Q96Q91 983 aa13.06□□□□□ -0.32
VIPAS39-201ENST00000327028 TNNQ9UQP3 1299 aa13.06□□□□□ -0.32
VIPAS39-201ENST00000327028 ABCC4O15439 1325 aa13.06□□□□□ -0.32
VIPAS39-201ENST00000327028 RREB1Q92766 1687 aa13.06□□□□□ -0.32
VIPAS39-201ENST00000327028 PDIA6Q15084 440 aa13.06□□□□□ -0.32
VIPAS39-201ENST00000327028 DNAJC10Q8IXB1 793 aa13.06□□□□□ -0.32
VIPAS39-201ENST00000327028 FTSJ3Q8IY81 847 aaKnown RBP13.06□□□□□ -0.32
VIPAS39-201ENST00000327028 HYPKQ9NX55 129 aa13.06□□□□□ -0.32
VIPAS39-201ENST00000327028 LOC102724428A0A0B4J2F2 783 aa13.05□□□□□ -0.32
VIPAS39-201ENST00000327028 RLBP1P12271 317 aa13.05□□□□□ -0.32
VIPAS39-201ENST00000327028 SIK1P57059 783 aa13.05□□□□□ -0.32
VIPAS39-201ENST00000327028 PROSER3Q2NL68 480 aa13.05□□□□□ -0.32
VIPAS39-201ENST00000327028 PANK1Q8TE04 598 aa13.05□□□□□ -0.32
VIPAS39-201ENST00000327028 CRBNQ96SW2 442 aa13.05□□□□□ -0.32
VIPAS39-201ENST00000327028 STARD3NLO95772 234 aa13.04□□□□□ -0.32
VIPAS39-201ENST00000327028 CLUAP1Q96AJ1 413 aa13.04□□□□□ -0.32
VIPAS39-201ENST00000327028 PXDNLA1KZ92 1463 aa13.04□□□□□ -0.32
VIPAS39-201ENST00000327028 ANXA1P04083 346 aa13.04□□□□□ -0.32
VIPAS39-201ENST00000327028 PHAXQ9H814 394 aaKnown RBP13.04□□□□□ -0.32
VIPAS39-201ENST00000327028 CYP19A1P11511 503 aaPredicted RBP13.03□□□□□ -0.32
VIPAS39-201ENST00000327028 LRP10Q7Z4F1 713 aa13.03□□□□□ -0.32
VIPAS39-201ENST00000327028 TNS1Q9HBL0 1735 aaKnown RBP13.03□□□□□ -0.32
VIPAS39-201ENST00000327028 FKBP5Q13451 457 aaPredicted RBP13.03□□□□□ -0.32
VIPAS39-201ENST00000327028 NBPF26B4DH59 902 aa13.02□□□□□ -0.32
VIPAS39-201ENST00000327028 ATP6V1AP38606 617 aa13.02□□□□□ -0.32
VIPAS39-201ENST00000327028 NBPF14Q5TI25 921 aa13.02□□□□□ -0.32
VIPAS39-201ENST00000327028 NBPF10Q6P3W6 841 aaKnown RBP13.02□□□□□ -0.32
VIPAS39-201ENST00000327028 NBPF15Q8N660 670 aa13.02□□□□□ -0.32
VIPAS39-201ENST00000327028 EXOC6Q8TAG9 804 aa13.02□□□□□ -0.32
VIPAS39-201ENST00000327028 MVPQ14764 893 aaKnown RBP13.02□□□□□ -0.33
VIPAS39-201ENST00000327028 COG6Q9Y2V7 657 aa13.02□□□□□ -0.33
VIPAS39-201ENST00000327028 TAF1LQ8IZX4 1826 aa13.01□□□□□ -0.33
VIPAS39-201ENST00000327028 TRIM37O94972 964 aa13.01□□□□□ -0.33
VIPAS39-201ENST00000327028 A1BGP04217 495 aa13.01□□□□□ -0.33
VIPAS39-201ENST00000327028 MYL6BP14649 208 aa13.01□□□□□ -0.33
VIPAS39-201ENST00000327028 ITPK1Q13572 414 aa13.01□□□□□ -0.33
VIPAS39-201ENST00000327028 TMEM57Q8N5G2 664 aa13.01□□□□□ -0.33
VIPAS39-201ENST00000327028 RGPD3A6NKT7 1758 aaPredicted RBP13.01□□□□□ -0.33
VIPAS39-201ENST00000327028 RGPD4Q7Z3J3 1758 aa13.01□□□□□ -0.33
VIPAS39-201ENST00000327028 ARFGEF2Q9Y6D5 1785 aa13□□□□□ -0.33
VIPAS39-201ENST00000327028 NUP188Q5SRE5 1749 aa13□□□□□ -0.33
VIPAS39-201ENST00000327028 ADCY9O60503 1353 aa13□□□□□ -0.33
VIPAS39-201ENST00000327028 PIP4K2AP48426 406 aaPredicted RBP13□□□□□ -0.33
VIPAS39-201ENST00000327028 INTS3Q68E01 1043 aaKnown RBP13□□□□□ -0.33
VIPAS39-201ENST00000327028 ITPRIPQ8IWB1 547 aa13□□□□□ -0.33
VIPAS39-201ENST00000327028 XAGE3Q8WTP9 111 aa13□□□□□ -0.33
VIPAS39-201ENST00000327028 MYH14Q7Z406 1995 aaKnown RBP12.99□□□□□ -0.33
VIPAS39-201ENST00000327028 DDX58O95786 925 aaKnown RBP12.99□□□□□ -0.33
VIPAS39-201ENST00000327028 F6X3S4 739 aa12.99□□□□□ -0.33
VIPAS39-201ENST00000327028 CCDC87Q9NVE4 849 aa12.99□□□□□ -0.33
VIPAS39-201ENST00000327028 CCNL1Q9UK58 526 aaPredicted RBP12.99□□□□□ -0.33
VIPAS39-201ENST00000327028 DDX19BQ9UMR2 479 aa12.99□□□□□ -0.33
VIPAS39-201ENST00000327028 ATP10DQ9P241 1426 aa12.99□□□□□ -0.33
VIPAS39-201ENST00000327028 CRKLP46109 303 aaKnown RBP12.98□□□□□ -0.33
VIPAS39-201ENST00000327028 CCT4P50991 539 aaKnown RBP12.98□□□□□ -0.33
VIPAS39-201ENST00000327028 KSR2Q6VAB6 950 aa12.98□□□□□ -0.33
VIPAS39-201ENST00000327028 COPS6Q7L5N1 327 aa12.98□□□□□ -0.33
VIPAS39-201ENST00000327028 PELP1Q8IZL8 1130 aaKnown RBP12.98□□□□□ -0.33
VIPAS39-201ENST00000327028 DNAAF4Q8WXU2 420 aa12.98□□□□□ -0.33
VIPAS39-201ENST00000327028 ZBTB1Q9Y2K1 713 aa12.98□□□□□ -0.33
VIPAS39-201ENST00000327028 CNTNAP4Q9C0A0 1308 aa12.98□□□□□ -0.33
VIPAS39-201ENST00000327028 PI4KAP2A4QPH2 592 aa12.98□□□□□ -0.33
VIPAS39-201ENST00000327028 AIMP1Q12904 312 aaKnown RBP12.98□□□□□ -0.33
VIPAS39-201ENST00000327028 AAMPQ13685 434 aa12.98□□□□□ -0.33
VIPAS39-201ENST00000327028 INTS5Q6P9B9 1019 aaKnown RBP12.98□□□□□ -0.33
VIPAS39-201ENST00000327028 PI4KAP1Q8N8J0 262 aa12.98□□□□□ -0.33
VIPAS39-201ENST00000327028 LINC00116Q8NCU8 138 aa12.98□□□□□ -0.33
VIPAS39-201ENST00000327028 C4BP0C0L5 1744 aa12.97□□□□□ -0.33
VIPAS39-201ENST00000327028 EP400Q96L91 3159 aa12.97□□□□□ -0.33
VIPAS39-201ENST00000327028 IL6STP40189 918 aaPredicted RBP12.97□□□□□ -0.33
VIPAS39-201ENST00000327028 SLC4A10Q6U841 1118 aa12.97□□□□□ -0.33
VIPAS39-201ENST00000327028 PPP4R2Q9NY27 417 aa12.97□□□□□ -0.33
VIPAS39-201ENST00000327028 SLC27A3Q5K4L6 730 aa12.96□□□□□ -0.33
VIPAS39-201ENST00000327028 MAP3K2Q9Y2U5 619 aa12.96□□□□□ -0.33
VIPAS39-201ENST00000327028 PLBD2Q8NHP8 589 aa12.96□□□□□ -0.33
VIPAS39-201ENST00000327028 CHMP4BQ9H444 224 aaKnown RBP12.96□□□□□ -0.33
VIPAS39-201ENST00000327028 RC3H1Q5TC82 1133 aaKnown RBP12.95□□□□□ -0.34
VIPAS39-201ENST00000327028 ANKRD13DQ6ZTN6 518 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms