RNA–Protein interactions for RNA: ENST00000324954.10

SMARCA2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 1,781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-202ENST00000324954 IFT57Q9NWB7 429 aa11.3□□□□□ -0.6
SMARCA2-202ENST00000324954 IL16Q14005 1332 aa11.29□□□□□ -0.6
SMARCA2-202ENST00000324954 GOLGA2Q08379 1002 aa11.29□□□□□ -0.6
SMARCA2-202ENST00000324954 DEFB132Q7Z7B7 95 aa11.29□□□□□ -0.6
SMARCA2-202ENST00000324954 FANCIQ9NVI1 1328 aa11.29□□□□□ -0.6
SMARCA2-202ENST00000324954 PRAMEF22A3QJZ6 481 aa11.28□□□□□ -0.6
SMARCA2-202ENST00000324954 GNAI1P63096 354 aa11.28□□□□□ -0.6
SMARCA2-202ENST00000324954 CALD1Q05682 793 aaKnown RBP11.28□□□□□ -0.6
SMARCA2-202ENST00000324954 EIF4A1P60842 406 aaKnown RBP11.28□□□□□ -0.6
SMARCA2-202ENST00000324954 EN1Q05925 392 aaPredicted RBP11.28□□□□□ -0.6
SMARCA2-202ENST00000324954 SLFN5Q08AF3 891 aa11.28□□□□□ -0.6
SMARCA2-202ENST00000324954 POLA2Q14181 598 aa11.28□□□□□ -0.6
SMARCA2-202ENST00000324954 TTC5Q8N0Z6 440 aa11.28□□□□□ -0.6
SMARCA2-202ENST00000324954 LRRC4BQ9NT99 713 aa11.28□□□□□ -0.6
SMARCA2-202ENST00000324954 C5P01031 1676 aa11.27□□□□□ -0.6
SMARCA2-202ENST00000324954 LOC102724428A0A0B4J2F2 783 aa11.27□□□□□ -0.61
SMARCA2-202ENST00000324954 PLSCR1O15162 318 aa11.27□□□□□ -0.61
SMARCA2-202ENST00000324954 SIK1P57059 783 aa11.27□□□□□ -0.61
SMARCA2-202ENST00000324954 TRMT2AQ8IZ69 625 aaKnown RBP11.27□□□□□ -0.61
SMARCA2-202ENST00000324954 RBM42Q9BTD8 480 aaKnown RBP11.27□□□□□ -0.61
SMARCA2-202ENST00000324954 BABAM1Q9NWV8 329 aa11.27□□□□□ -0.61
SMARCA2-202ENST00000324954 HEG1Q9ULI3 1381 aa11.27□□□□□ -0.61
SMARCA2-202ENST00000324954 TAF1LQ8IZX4 1826 aa11.27□□□□□ -0.61
SMARCA2-202ENST00000324954 RGPD3A6NKT7 1758 aaPredicted RBP11.26□□□□□ -0.61
SMARCA2-202ENST00000324954 RGPD4Q7Z3J3 1758 aa11.26□□□□□ -0.61
SMARCA2-202ENST00000324954 EZH2Q15910 746 aaKnown RBP11.26□□□□□ -0.61
SMARCA2-202ENST00000324954 DUSP27Q5VZP5 1158 aa11.26□□□□□ -0.61
SMARCA2-202ENST00000324954 TSPYL6Q8N831 410 aa11.26□□□□□ -0.61
SMARCA2-202ENST00000324954 SMARCC1Q92922 1105 aaPredicted RBP11.26□□□□□ -0.61
SMARCA2-202ENST00000324954 CAMKK2Q96RR4 588 aa11.26□□□□□ -0.61
SMARCA2-202ENST00000324954 TJP1Q07157 1748 aa11.26□□□□□ -0.61
SMARCA2-202ENST00000324954 MYH14Q7Z406 1995 aaKnown RBP11.26□□□□□ -0.61
SMARCA2-202ENST00000324954 E9PSI1 815 aa11.26□□□□□ -0.61
SMARCA2-202ENST00000324954 ELL2O00472 640 aaPredicted RBP11.26□□□□□ -0.61
SMARCA2-202ENST00000324954 ITPK1Q13572 414 aa11.26□□□□□ -0.61
SMARCA2-202ENST00000324954 TXNRD1Q16881 649 aa11.26□□□□□ -0.61
SMARCA2-202ENST00000324954 CCDC125Q86Z20 511 aa11.26□□□□□ -0.61
SMARCA2-202ENST00000324954 C8orf58Q8NAV2 365 aa11.26□□□□□ -0.61
SMARCA2-202ENST00000324954 FMNL2Q96PY5 1086 aa11.26□□□□□ -0.61
SMARCA2-202ENST00000324954 UTRNP46939 3433 aa11.25□□□□□ -0.61
SMARCA2-202ENST00000324954 GTPBP6O43824 516 aaPredicted RBP11.25□□□□□ -0.61
SMARCA2-202ENST00000324954 GIGYF1O75420 1035 aaPredicted RBP11.25□□□□□ -0.61
SMARCA2-202ENST00000324954 ATP6V1AP38606 617 aa11.25□□□□□ -0.61
SMARCA2-202ENST00000324954 SF3B2Q13435 895 aaKnown RBP11.25□□□□□ -0.61
SMARCA2-202ENST00000324954 CCNL1Q9UK58 526 aaPredicted RBP11.25□□□□□ -0.61
SMARCA2-202ENST00000324954 COL5A3P25940 1745 aaPredicted RBP11.25□□□□□ -0.61
SMARCA2-202ENST00000324954 ZNF831Q5JPB2 1677 aa11.24□□□□□ -0.61
SMARCA2-202ENST00000324954 EXOSC9Q06265 439 aaKnown RBP11.24□□□□□ -0.61
SMARCA2-202ENST00000324954 DNAJC10Q8IXB1 793 aa11.24□□□□□ -0.61
SMARCA2-202ENST00000324954 MYH16Q9H6N6 1097 aa11.24□□□□□ -0.61
SMARCA2-202ENST00000324954 USP16Q9Y5T5 823 aa11.24□□□□□ -0.61
SMARCA2-202ENST00000324954 BAG6P46379 1132 aa11.23□□□□□ -0.61
SMARCA2-202ENST00000324954 BRPF1P55201 1214 aaPredicted RBP11.23□□□□□ -0.61
SMARCA2-202ENST00000324954 LINC00116Q8NCU8 138 aa11.23□□□□□ -0.61
SMARCA2-202ENST00000324954 CICQ96RK0 1608 aaPredicted RBP11.23□□□□□ -0.61
SMARCA2-202ENST00000324954 RREB1Q92766 1687 aa11.23□□□□□ -0.61
SMARCA2-202ENST00000324954 SNRPA1P09661 255 aaKnown RBP11.23□□□□□ -0.61
SMARCA2-202ENST00000324954 NUP188Q5SRE5 1749 aa11.22□□□□□ -0.61
SMARCA2-202ENST00000324954 SLC27A3Q5K4L6 730 aa11.22□□□□□ -0.61
SMARCA2-202ENST00000324954 LAMB4A4D0S4 1761 aa11.22□□□□□ -0.61
SMARCA2-202ENST00000324954 C4BP0C0L5 1744 aa11.21□□□□□ -0.61
SMARCA2-202ENST00000324954 CYP19A1P11511 503 aaPredicted RBP11.21□□□□□ -0.61
SMARCA2-202ENST00000324954 PIP4K2AP48426 406 aaPredicted RBP11.21□□□□□ -0.61
SMARCA2-202ENST00000324954 AMIGO3Q86WK7 504 aa11.21□□□□□ -0.61
SMARCA2-202ENST00000324954 NECTIN2Q92692 538 aa11.21□□□□□ -0.61
SMARCA2-202ENST00000324954 VAMP4O75379 141 aa11.21□□□□□ -0.62
SMARCA2-202ENST00000324954 A1BGP04217 495 aa11.21□□□□□ -0.62
SMARCA2-202ENST00000324954 TWISTNBQ3B726 338 aaPredicted RBP11.21□□□□□ -0.62
SMARCA2-202ENST00000324954 SMIM5Q71RC9 77 aa11.21□□□□□ -0.62
SMARCA2-202ENST00000324954 EIF2S2P20042 333 aaKnown RBP11.2□□□□□ -0.62
SMARCA2-202ENST00000324954 CRKLP46109 303 aaKnown RBP11.2□□□□□ -0.62
SMARCA2-202ENST00000324954 INTS5Q6P9B9 1019 aaKnown RBP11.2□□□□□ -0.62
SMARCA2-202ENST00000324954 ANO8Q9HCE9 1232 aaPredicted RBP11.2□□□□□ -0.62
SMARCA2-202ENST00000324954 ZBTB47Q9UFB7 747 aaPredicted RBP11.2□□□□□ -0.62
SMARCA2-202ENST00000324954 NBPF26B4DH59 902 aa11.19□□□□□ -0.62
SMARCA2-202ENST00000324954 TCERG1O14776 1098 aaKnown RBP11.19□□□□□ -0.62
SMARCA2-202ENST00000324954 ZNF827Q17R98 1081 aa11.19□□□□□ -0.62
SMARCA2-202ENST00000324954 PROSER3Q2NL68 480 aa11.19□□□□□ -0.62
SMARCA2-202ENST00000324954 NBPF14Q5TI25 921 aa11.19□□□□□ -0.62
SMARCA2-202ENST00000324954 NBPF10Q6P3W6 841 aaKnown RBP11.19□□□□□ -0.62
SMARCA2-202ENST00000324954 NBPF15Q8N660 670 aa11.19□□□□□ -0.62
SMARCA2-202ENST00000324954 ZBTB1Q9Y2K1 713 aa11.19□□□□□ -0.62
SMARCA2-202ENST00000324954 TUBGCP6Q96RT7 1819 aa11.19□□□□□ -0.62
SMARCA2-202ENST00000324954 UBR3Q6ZT12 1888 aa11.19□□□□□ -0.62
SMARCA2-202ENST00000324954 ANXA1P04083 346 aa11.18□□□□□ -0.62
SMARCA2-202ENST00000324954 HOXB7P09629 217 aa11.18□□□□□ -0.62
SMARCA2-202ENST00000324954 PDIA6Q15084 440 aa11.18□□□□□ -0.62
SMARCA2-202ENST00000324954 HDGFL1Q5TGJ6 251 aa11.18□□□□□ -0.62
SMARCA2-202ENST00000324954 ZBTB12Q9Y330 459 aaPredicted RBP11.18□□□□□ -0.62
SMARCA2-202ENST00000324954 STARD3NLO95772 234 aa11.18□□□□□ -0.62
SMARCA2-202ENST00000324954 RNF25Q96BH1 459 aaPredicted RBP11.18□□□□□ -0.62
SMARCA2-202ENST00000324954 TEX13AQ9BXU3 409 aaPredicted RBP11.18□□□□□ -0.62
SMARCA2-202ENST00000324954 CHPF2Q9P2E5 772 aa11.18□□□□□ -0.62
SMARCA2-202ENST00000324954 CNTNAP4Q9C0A0 1308 aa11.17□□□□□ -0.62
SMARCA2-202ENST00000324954 SOCS7O14512 581 aa11.17□□□□□ -0.62
SMARCA2-202ENST00000324954 CANXP27824 592 aaKnown RBP11.17□□□□□ -0.62
SMARCA2-202ENST00000324954 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.17□□□□□ -0.62
SMARCA2-202ENST00000324954 LRP10Q7Z4F1 713 aa11.17□□□□□ -0.62
SMARCA2-202ENST00000324954 AKT1S1Q96B36 256 aa11.17□□□□□ -0.62
SMARCA2-202ENST00000324954 CCDC87Q9NVE4 849 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms