RNA–Protein interactions for RNA: ENST00000323250.9

TYMS-202, Transcript of thymidylate synthetase, humanhuman

TSL 1 (best) BASIC

Gene TYMS, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-202ENST00000323250 PRAMEF22A3QJZ6 481 aa23.45■■□□□ 1.34
TYMS-202ENST00000323250 DDR1Q08345 913 aa23.45■■□□□ 1.34
TYMS-202ENST00000323250 FMNL2Q96PY5 1086 aa23.45■■□□□ 1.34
TYMS-202ENST00000323250 COL15A1P39059 1388 aa23.44■■□□□ 1.34
TYMS-202ENST00000323250 STARD3NLO95772 234 aa23.44■■□□□ 1.34
TYMS-202ENST00000323250 BCL2L12Q9HB09 334 aa23.44■■□□□ 1.34
TYMS-202ENST00000323250 MIS18AQ9NYP9 233 aa23.44■■□□□ 1.34
TYMS-202ENST00000323250 EIF5P55010 431 aaKnown RBP23.43■■□□□ 1.34
TYMS-202ENST00000323250 NFE2L2Q16236 605 aa23.43■■□□□ 1.34
TYMS-202ENST00000323250 THUMPD2Q9BTF0 503 aaKnown RBP23.43■■□□□ 1.34
TYMS-202ENST00000323250 NARFQ9UHQ1 456 aa23.43■■□□□ 1.34
TYMS-202ENST00000323250 A1BGP04217 495 aa23.42■■□□□ 1.34
TYMS-202ENST00000323250 TM4SF1P30408 202 aa23.42■■□□□ 1.34
TYMS-202ENST00000323250 USP16Q9Y5T5 823 aa23.42■■□□□ 1.34
TYMS-202ENST00000323250 PARP3Q9Y6F1 533 aa23.42■■□□□ 1.34
TYMS-202ENST00000323250 C10orf71Q711Q0 1435 aa23.42■■□□□ 1.34
TYMS-202ENST00000323250 ZPR1O75312 459 aa23.41■■□□□ 1.34
TYMS-202ENST00000323250 TEX13AQ9BXU3 409 aaPredicted RBP23.41■■□□□ 1.34
TYMS-202ENST00000323250 ZEB1P37275 1124 aaPredicted RBP23.4■■□□□ 1.34
TYMS-202ENST00000323250 TAF7Q15545 349 aaPredicted RBP23.4■■□□□ 1.34
TYMS-202ENST00000323250 PRKRIP1Q9H875 184 aaPredicted RBP23.4■■□□□ 1.34
TYMS-202ENST00000323250 PXDNLA1KZ92 1463 aa23.4■■□□□ 1.34
TYMS-202ENST00000323250 A0A0G2JLW4 131 aa23.39■■□□□ 1.33
TYMS-202ENST00000323250 POLRMTO00411 1230 aaKnown RBP23.39■■□□□ 1.33
TYMS-202ENST00000323250 NEFMP07197 916 aa23.39■■□□□ 1.33
TYMS-202ENST00000323250 GRIN3BO60391 1043 aa23.38■■□□□ 1.33
TYMS-202ENST00000323250 PIP4K2AP48426 406 aaPredicted RBP23.38■■□□□ 1.33
TYMS-202ENST00000323250 NFIXQ14938 502 aa23.38■■□□□ 1.33
TYMS-202ENST00000323250 MAPK8IP3Q9UPT6 1336 aa23.37■■□□□ 1.33
TYMS-202ENST00000323250 DPEP1P16444 411 aa23.36■■□□□ 1.33
TYMS-202ENST00000323250 TGFB2P61812 414 aa23.36■■□□□ 1.33
TYMS-202ENST00000323250 ZNF784Q8NCA9 323 aaPredicted RBP23.36■■□□□ 1.33
TYMS-202ENST00000323250 PNNQ9H307 717 aaKnown RBP23.36■■□□□ 1.33
TYMS-202ENST00000323250 TBC1D2BQ9UPU7 963 aa23.36■■□□□ 1.33
TYMS-202ENST00000323250 ZNF330Q9Y3S2 320 aaPredicted RBP23.36■■□□□ 1.33
TYMS-202ENST00000323250 KIAA1551Q9HCM1 1747 aa23.36■■□□□ 1.33
TYMS-202ENST00000323250 KIF13BQ9NQT8 1826 aa23.36■■□□□ 1.33
TYMS-202ENST00000323250 DLG5Q8TDM6 1919 aa23.35■■□□□ 1.33
TYMS-202ENST00000323250 SNRPA1P09661 255 aaKnown RBP23.35■■□□□ 1.33
TYMS-202ENST00000323250 KCNA3P22001 575 aa23.35■■□□□ 1.33
TYMS-202ENST00000323250 IL6STP40189 918 aaPredicted RBP23.35■■□□□ 1.33
TYMS-202ENST00000323250 CCDC146Q8IYE0 955 aa23.35■■□□□ 1.33
TYMS-202ENST00000323250 TMPOP42166 694 aaKnown RBP23.33■■□□□ 1.33
TYMS-202ENST00000323250 RIPK4P57078 832 aa23.33■■□□□ 1.33
TYMS-202ENST00000323250 ADAMTS8Q9UP79 889 aa23.33■■□□□ 1.33
TYMS-202ENST00000323250 RRP7AQ9Y3A4 280 aaKnown RBP23.33■■□□□ 1.33
TYMS-202ENST00000323250 CHD4Q14839 1912 aa23.32■■□□□ 1.32
TYMS-202ENST00000323250 A0A087WZG4 1122 aa23.32■■□□□ 1.32
TYMS-202ENST00000323250 NBPF26B4DH59 902 aa23.32■■□□□ 1.32
TYMS-202ENST00000323250 NBPF10Q6P3W6 841 aaKnown RBP23.32■■□□□ 1.32
TYMS-202ENST00000323250 NBPF15Q8N660 670 aa23.32■■□□□ 1.32
TYMS-202ENST00000323250 TBC1D9BQ66K14 1250 aa23.31■■□□□ 1.32
TYMS-202ENST00000323250 BICDL1Q6ZP65 573 aa23.31■■□□□ 1.32
TYMS-202ENST00000323250 N4BP2Q86UW6 1770 aaPredicted RBP23.31■■□□□ 1.32
TYMS-202ENST00000323250 CAMTA2O94983 1202 aa23.3■■□□□ 1.32
TYMS-202ENST00000323250 SERPINB2P05120 415 aa23.3■■□□□ 1.32
TYMS-202ENST00000323250 EIF4A1P60842 406 aaKnown RBP23.3■■□□□ 1.32
TYMS-202ENST00000323250 CHRNA5P30532 468 aa23.29■■□□□ 1.32
TYMS-202ENST00000323250 PNISRQ8TF01 805 aaKnown RBP23.29■■□□□ 1.32
TYMS-202ENST00000323250 GIGYF1O75420 1035 aaPredicted RBP23.28■■□□□ 1.32
TYMS-202ENST00000323250 WDR43Q15061 677 aaKnown RBP eCLIP23.28■■□□□ 1.32
TYMS-202ENST00000323250 BCS1LQ9Y276 419 aa23.28■■□□□ 1.32
TYMS-202ENST00000323250 NEUROD2Q15784 382 aa23.27■■□□□ 1.32
TYMS-202ENST00000323250 DZIP3Q86Y13 1208 aaKnown RBP23.27■■□□□ 1.32
TYMS-202ENST00000323250 RUNDC1Q96C34 613 aa23.27■■□□□ 1.32
TYMS-202ENST00000323250 CCDC184Q52MB2 194 aa23.26■■□□□ 1.31
TYMS-202ENST00000323250 TRIM35Q9UPQ4 493 aa23.26■■□□□ 1.31
TYMS-202ENST00000323250 KDM3BQ7LBC6 1761 aa23.26■■□□□ 1.31
TYMS-202ENST00000323250 CARMIL3Q8ND23 1372 aa23.26■■□□□ 1.31
TYMS-202ENST00000323250 ZNF316A6NFI3 1004 aaPredicted RBP23.24■■□□□ 1.31
TYMS-202ENST00000323250 CCDC24Q8N4L8 307 aa23.24■■□□□ 1.31
TYMS-202ENST00000323250 NRXN2Q9P2S2 1712 aa23.24■■□□□ 1.31
TYMS-202ENST00000323250 AFDNP55196 1824 aaKnown RBP23.24■■□□□ 1.31
TYMS-202ENST00000323250 SCN7AQ01118 1682 aa23.23■■□□□ 1.31
TYMS-202ENST00000323250 PIM2Q9P1W9 311 aa23.23■■□□□ 1.31
TYMS-202ENST00000323250 TSPYL4Q9UJ04 414 aa23.23■■□□□ 1.31
TYMS-202ENST00000323250 NPM2Q86SE8 214 aaKnown RBP23.22■■□□□ 1.31
TYMS-202ENST00000323250 LMOD3Q0VAK6 560 aa23.2■■□□□ 1.3
TYMS-202ENST00000323250 PRR5LQ6MZQ0 368 aa23.2■■□□□ 1.3
TYMS-202ENST00000323250 BRCA1P38398 1863 aaKnown RBP23.19■■□□□ 1.3
TYMS-202ENST00000323250 ADCY9O60503 1353 aa23.19■■□□□ 1.3
TYMS-202ENST00000323250 HLFQ16534 295 aa23.19■■□□□ 1.3
TYMS-202ENST00000323250 DALRD3Q5D0E6 543 aaKnown RBP23.19■■□□□ 1.3
TYMS-202ENST00000323250 ARHGAP27Q6ZUM4 889 aa23.19■■□□□ 1.3
TYMS-202ENST00000323250 NGEFQ8N5V2 710 aa23.19■■□□□ 1.3
TYMS-202ENST00000323250 SETDB2Q96T68 719 aa23.19■■□□□ 1.3
TYMS-202ENST00000323250 ATP10DQ9P241 1426 aa23.17■■□□□ 1.3
TYMS-202ENST00000323250 CHL1O00533 1208 aa23.17■■□□□ 1.3
TYMS-202ENST00000323250 KRT24Q2M2I5 525 aa23.17■■□□□ 1.3
TYMS-202ENST00000323250 CLEC4GQ6UXB4 293 aa23.17■■□□□ 1.3
TYMS-202ENST00000323250 TTLL7Q6ZT98 887 aa23.17■■□□□ 1.3
TYMS-202ENST00000323250 C2CD5Q86YS7 1000 aa23.17■■□□□ 1.3
TYMS-202ENST00000323250 BABAM1Q9NWV8 329 aa23.17■■□□□ 1.3
TYMS-202ENST00000323250 BCORQ6W2J9 1755 aa23.17■■□□□ 1.3
TYMS-202ENST00000323250 MYL6BP14649 208 aa23.16■■□□□ 1.3
TYMS-202ENST00000323250 LAMB4A4D0S4 1761 aa23.15■■□□□ 1.3
TYMS-202ENST00000323250 APAF1O14727 1248 aa23.15■■□□□ 1.3
TYMS-202ENST00000323250 PDIA6Q15084 440 aa23.15■■□□□ 1.3
TYMS-202ENST00000323250 LRP10Q7Z4F1 713 aa23.15■■□□□ 1.3
TYMS-202ENST00000323250 BRIP1Q9BX63 1249 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms