RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 COL22A1Q8NFW1 1626 aaPredicted RBP14.84□□□□□ -0.03
NCL-201ENST00000322723 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.84□□□□□ -0.03
NCL-201ENST00000322723 PDE1AP54750 535 aa14.84□□□□□ -0.03
NCL-201ENST00000322723 EPB41L2O43491 1005 aaKnown RBP14.83□□□□□ -0.03
NCL-201ENST00000322723 KCPQ6ZWJ8 1503 aa14.83□□□□□ -0.04
NCL-201ENST00000322723 KCNQ3O43525 872 aa14.83□□□□□ -0.04
NCL-201ENST00000322723 CD2BP2O95400 341 aaKnown RBP14.83□□□□□ -0.04
NCL-201ENST00000322723 PHAXQ9H814 394 aaKnown RBP14.83□□□□□ -0.04
NCL-201ENST00000322723 GIGYF1O75420 1035 aaPredicted RBP14.82□□□□□ -0.04
NCL-201ENST00000322723 HDGFL1Q5TGJ6 251 aa14.82□□□□□ -0.04
NCL-201ENST00000322723 DNAJC5Q9H3Z4 198 aa14.82□□□□□ -0.04
NCL-201ENST00000322723 CHMP5Q9NZZ3 219 aa14.82□□□□□ -0.04
NCL-201ENST00000322723 LRP10Q7Z4F1 713 aa14.82□□□□□ -0.04
NCL-201ENST00000322723 PROSER2Q86WR7 435 aaPredicted RBP14.82□□□□□ -0.04
NCL-201ENST00000322723 LTV1Q96GA3 475 aaPredicted RBP14.82□□□□□ -0.04
NCL-201ENST00000322723 PDIA6Q15084 440 aa14.82□□□□□ -0.04
NCL-201ENST00000322723 ZNF530Q6P9A1 599 aaPredicted RBP14.82□□□□□ -0.04
NCL-201ENST00000322723 SPATA31A3Q5VYP0 1347 aa14.81□□□□□ -0.04
NCL-201ENST00000322723 SMARCA5O60264 1052 aaPredicted RBP14.81□□□□□ -0.04
NCL-201ENST00000322723 FKBP5Q13451 457 aaPredicted RBP14.81□□□□□ -0.04
NCL-201ENST00000322723 CICQ96RK0 1608 aaPredicted RBP14.81□□□□□ -0.04
NCL-201ENST00000322723 RAB11FIP3O75154 756 aa14.8□□□□□ -0.04
NCL-201ENST00000322723 CHPF2Q9P2E5 772 aa14.8□□□□□ -0.04
NCL-201ENST00000322723 LRP6O75581 1613 aa14.8□□□□□ -0.04
NCL-201ENST00000322723 ANP32BQ92688 251 aaKnown RBP14.79□□□□□ -0.04
NCL-201ENST00000322723 SRCIN1Q9C0H9 1055 aa14.79□□□□□ -0.04
NCL-201ENST00000322723 LRRFIP2Q9Y608 721 aaKnown RBP14.79□□□□□ -0.04
NCL-201ENST00000322723 BTBD11A6QL63 1104 aa14.79□□□□□ -0.04
NCL-201ENST00000322723 HSCBQ8IWL3 235 aa14.79□□□□□ -0.04
NCL-201ENST00000322723 TNS2Q63HR2 1409 aa14.79□□□□□ -0.04
NCL-201ENST00000322723 ALDH1L1O75891 902 aa14.79□□□□□ -0.04
NCL-201ENST00000322723 RAB3GAP1Q15042 981 aa14.79□□□□□ -0.04
NCL-201ENST00000322723 LRRCC1Q9C099 1032 aa14.79□□□□□ -0.04
NCL-201ENST00000322723 COL5A2P05997 1499 aaPredicted RBP14.78□□□□□ -0.04
NCL-201ENST00000322723 NPHP3Q7Z494 1330 aa14.78□□□□□ -0.04
NCL-201ENST00000322723 RABEP1Q15276 862 aa14.78□□□□□ -0.04
NCL-201ENST00000322723 K7ELQ4 463 aaPredicted RBP14.78□□□□□ -0.04
NCL-201ENST00000322723 DNAAF4Q8WXU2 420 aa14.78□□□□□ -0.04
NCL-201ENST00000322723 CYP2E1P05181 493 aaPredicted RBP14.77□□□□□ -0.04
NCL-201ENST00000322723 DBF4Q9UBU7 674 aaPredicted RBP14.77□□□□□ -0.04
NCL-201ENST00000322723 ITGB4P16144 1822 aa14.77□□□□□ -0.05
NCL-201ENST00000322723 PHKG2P15735 406 aa14.77□□□□□ -0.05
NCL-201ENST00000322723 SLC4A10Q6U841 1118 aa14.77□□□□□ -0.05
NCL-201ENST00000322723 PI4K2BQ8TCG2 481 aa14.77□□□□□ -0.05
NCL-201ENST00000322723 MCM4P33991 863 aa14.76□□□□□ -0.05
NCL-201ENST00000322723 MPRIPQ6WCQ1 1025 aa14.76□□□□□ -0.05
NCL-201ENST00000322723 SOS2Q07890 1332 aaPredicted RBP14.76□□□□□ -0.05
NCL-201ENST00000322723 ZBTB7CA1YPR0 619 aa14.76□□□□□ -0.05
NCL-201ENST00000322723 PLEKHG5O94827 1062 aa14.76□□□□□ -0.05
NCL-201ENST00000322723 MX1P20591 662 aa14.76□□□□□ -0.05
NCL-201ENST00000322723 SLC52A2Q9HAB3 445 aa14.76□□□□□ -0.05
NCL-201ENST00000322723 XPCQ01831 940 aaPredicted RBP14.75□□□□□ -0.05
NCL-201ENST00000322723 ANKRD36CQ5JPF3 1778 aa14.75□□□□□ -0.05
NCL-201ENST00000322723 UBTFL1P0CB47 393 aaPredicted RBP14.75□□□□□ -0.05
NCL-201ENST00000322723 L1TD1Q5T7N2 865 aaKnown RBP14.75□□□□□ -0.05
NCL-201ENST00000322723 CADPS2Q86UW7 1296 aa14.75□□□□□ -0.05
NCL-201ENST00000322723 COL16A1Q07092 1604 aaPredicted RBP14.75□□□□□ -0.05
NCL-201ENST00000322723 KSR2Q6VAB6 950 aa14.75□□□□□ -0.05
NCL-201ENST00000322723 C14orf37Q86TY3 774 aa14.75□□□□□ -0.05
NCL-201ENST00000322723 EXOC6BQ9Y2D4 811 aa14.75□□□□□ -0.05
NCL-201ENST00000322723 RREB1Q92766 1687 aa14.74□□□□□ -0.05
NCL-201ENST00000322723 NBPF7P0C2Y1 421 aaPredicted RBP14.74□□□□□ -0.05
NCL-201ENST00000322723 ERC2O15083 957 aa14.74□□□□□ -0.05
NCL-201ENST00000322723 C1orf141Q5JVX7 400 aa14.74□□□□□ -0.05
NCL-201ENST00000322723 DDX21Q9NR30 783 aaKnown RBP eCLIP14.74□□□□□ -0.05
NCL-201ENST00000322723 HYPKQ9NX55 129 aa14.74□□□□□ -0.05
NCL-201ENST00000322723 FSD2A1L4K1 749 aa14.74□□□□□ -0.05
NCL-201ENST00000322723 TEFQ10587 303 aa14.74□□□□□ -0.05
NCL-201ENST00000322723 PROSER3Q2NL68 480 aa14.74□□□□□ -0.05
NCL-201ENST00000322723 KAZALD1Q96I82 304 aa14.74□□□□□ -0.05
NCL-201ENST00000322723 ESYT1Q9BSJ8 1104 aa14.74□□□□□ -0.05
NCL-201ENST00000322723 COL14A1Q05707 1796 aaKnown RBP14.74□□□□□ -0.05
NCL-201ENST00000322723 RBM42Q9BTD8 480 aaKnown RBP14.73□□□□□ -0.05
NCL-201ENST00000322723 PI4KAP2A4QPH2 592 aa14.73□□□□□ -0.05
NCL-201ENST00000322723 CHMLP26374 656 aa14.73□□□□□ -0.05
NCL-201ENST00000322723 PPP1R42Q7Z4L9 355 aa14.73□□□□□ -0.05
NCL-201ENST00000322723 PI4KAP1Q8N8J0 262 aa14.73□□□□□ -0.05
NCL-201ENST00000322723 ANAPC15P60006 121 aa14.72□□□□□ -0.05
NCL-201ENST00000322723 SNRKQ9NRH2 765 aa14.72□□□□□ -0.05
NCL-201ENST00000322723 NRAPQ86VF7 1730 aa14.72□□□□□ -0.05
NCL-201ENST00000322723 REC8O95072 547 aa14.72□□□□□ -0.05
NCL-201ENST00000322723 SPEF2Q9C093 1822 aa14.72□□□□□ -0.05
NCL-201ENST00000322723 AHDC1Q5TGY3 1603 aaPredicted RBP14.72□□□□□ -0.05
NCL-201ENST00000322723 JCADQ9P266 1359 aa14.72□□□□□ -0.05
NCL-201ENST00000322723 ATF3P18847 181 aa14.71□□□□□ -0.05
NCL-201ENST00000322723 ZNF790Q6PG37 636 aa14.71□□□□□ -0.05
NCL-201ENST00000322723 DDX60Q8IY21 1712 aaKnown RBP14.71□□□□□ -0.05
NCL-201ENST00000322723 NECTIN2Q92692 538 aa14.71□□□□□ -0.05
NCL-201ENST00000322723 NKX1-1Q15270 411 aaPredicted RBP14.71□□□□□ -0.05
NCL-201ENST00000322723 TTC41PQ6P2S7 1318 aa14.71□□□□□ -0.06
NCL-201ENST00000322723 PRAMEF22A3QJZ6 481 aa14.7□□□□□ -0.06
NCL-201ENST00000322723 RHPN1Q8TCX5 695 aa14.7□□□□□ -0.06
NCL-201ENST00000322723 BRINP3Q76B58 766 aa14.7□□□□□ -0.06
NCL-201ENST00000322723 CYP27B1O15528 508 aa14.7□□□□□ -0.06
NCL-201ENST00000322723 FAM43AQ8N2R8 423 aa14.7□□□□□ -0.06
NCL-201ENST00000322723 CASC1Q6TDU7 716 aa14.7□□□□□ -0.06
NCL-201ENST00000322723 LINS1Q8NG48 757 aa14.7□□□□□ -0.06
NCL-201ENST00000322723 KCNB2Q92953 911 aa14.7□□□□□ -0.06
NCL-201ENST00000322723 KIF1BPQ96EK5 621 aa14.7□□□□□ -0.06
NCL-201ENST00000322723 UNC5CLQ8IV45 518 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms