RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 FKBP5Q13451 457 aaPredicted RBP15.92■□□□□ 0.14
PTPN6-201ENST00000318974 FAM98CQ17RN3 349 aaKnown RBP15.92■□□□□ 0.14
PTPN6-201ENST00000318974 INTS3Q68E01 1043 aaKnown RBP15.92■□□□□ 0.14
PTPN6-201ENST00000318974 PCDHB15Q9Y5E8 787 aa15.91■□□□□ 0.14
PTPN6-201ENST00000318974 TOGARAM1Q9Y4F4 1720 aa15.91■□□□□ 0.14
PTPN6-201ENST00000318974 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.91■□□□□ 0.14
PTPN6-201ENST00000318974 AFF2P51816 1311 aa15.91■□□□□ 0.14
PTPN6-201ENST00000318974 RWDD1Q9H446 243 aaPredicted RBP15.91■□□□□ 0.14
PTPN6-201ENST00000318974 ZBTB7BO15156 539 aaPredicted RBP15.9■□□□□ 0.14
PTPN6-201ENST00000318974 PRKCSHP14314 528 aaPredicted RBP15.9■□□□□ 0.14
PTPN6-201ENST00000318974 PHAXQ9H814 394 aaKnown RBP15.9■□□□□ 0.14
PTPN6-201ENST00000318974 ZBTB40Q9NUA8 1239 aa15.9■□□□□ 0.14
PTPN6-201ENST00000318974 MARCH10Q8NA82 808 aaPredicted RBP15.9■□□□□ 0.14
PTPN6-201ENST00000318974 PIGBQ92521 554 aa15.9■□□□□ 0.14
PTPN6-201ENST00000318974 F6X3S4 739 aa15.89■□□□□ 0.13
PTPN6-201ENST00000318974 PAPPAQ13219 1627 aa15.88■□□□□ 0.13
PTPN6-201ENST00000318974 DDX21Q9NR30 783 aaKnown RBP eCLIP15.88■□□□□ 0.13
PTPN6-201ENST00000318974 HYPKQ9NX55 129 aa15.88■□□□□ 0.13
PTPN6-201ENST00000318974 USP16Q9Y5T5 823 aa15.88■□□□□ 0.13
PTPN6-201ENST00000318974 ANXA1P04083 346 aa15.88■□□□□ 0.13
PTPN6-201ENST00000318974 CCT4P50991 539 aaKnown RBP15.88■□□□□ 0.13
PTPN6-201ENST00000318974 SLC4A10Q6U841 1118 aa15.88■□□□□ 0.13
PTPN6-201ENST00000318974 KCPQ6ZWJ8 1503 aa15.88■□□□□ 0.13
PTPN6-201ENST00000318974 BCL9O00512 1426 aa15.87■□□□□ 0.13
PTPN6-201ENST00000318974 GJD4Q96KN9 370 aaPredicted RBP15.87■□□□□ 0.13
PTPN6-201ENST00000318974 A0A0G2JS52 829 aa15.87■□□□□ 0.13
PTPN6-201ENST00000318974 PTCD1O75127 700 aaKnown RBP15.87■□□□□ 0.13
PTPN6-201ENST00000318974 PRIM1P49642 420 aaKnown RBP15.87■□□□□ 0.13
PTPN6-201ENST00000318974 PROSER3Q2NL68 480 aa15.87■□□□□ 0.13
PTPN6-201ENST00000318974 SYTL4Q96C24 671 aaPredicted RBP15.87■□□□□ 0.13
PTPN6-201ENST00000318974 ATG3Q9NT62 314 aa15.87■□□□□ 0.13
PTPN6-201ENST00000318974 TRPC5Q9UL62 973 aaPredicted RBP15.87■□□□□ 0.13
PTPN6-201ENST00000318974 C5P01031 1676 aa15.86■□□□□ 0.13
PTPN6-201ENST00000318974 PDIA6Q15084 440 aa15.86■□□□□ 0.13
PTPN6-201ENST00000318974 ASAP1Q9ULH1 1129 aa15.86■□□□□ 0.13
PTPN6-201ENST00000318974 GLI3P10071 1580 aa15.86■□□□□ 0.13
PTPN6-201ENST00000318974 ATRNO75882 1429 aa15.86■□□□□ 0.13
PTPN6-201ENST00000318974 NBR1Q14596 966 aa15.86■□□□□ 0.13
PTPN6-201ENST00000318974 CACNA1FO60840 1977 aa15.85■□□□□ 0.13
PTPN6-201ENST00000318974 UBR2Q8IWV8 1755 aa15.85■□□□□ 0.13
PTPN6-201ENST00000318974 PXDNLA1KZ92 1463 aa15.85■□□□□ 0.13
PTPN6-201ENST00000318974 ERBB4Q15303 1308 aa15.84■□□□□ 0.13
PTPN6-201ENST00000318974 VSIG10Q8N0Z9 540 aa15.84■□□□□ 0.13
PTPN6-201ENST00000318974 ACSBG1Q96GR2 724 aa15.84■□□□□ 0.13
PTPN6-201ENST00000318974 PI4KAP2A4QPH2 592 aa15.83■□□□□ 0.13
PTPN6-201ENST00000318974 DDX58O95786 925 aaKnown RBP15.83■□□□□ 0.13
PTPN6-201ENST00000318974 MYL6BP14649 208 aa15.83■□□□□ 0.13
PTPN6-201ENST00000318974 HDAC1Q13547 482 aaPredicted RBP15.83■□□□□ 0.13
PTPN6-201ENST00000318974 PI4KAP1Q8N8J0 262 aa15.83■□□□□ 0.13
PTPN6-201ENST00000318974 DNAAF4Q8WXU2 420 aa15.83■□□□□ 0.13
PTPN6-201ENST00000318974 PDZRN3Q9UPQ7 1066 aa15.83■□□□□ 0.13
PTPN6-201ENST00000318974 DOT1LQ8TEK3 1739 aa15.83■□□□□ 0.12
PTPN6-201ENST00000318974 TEX13AQ9BXU3 409 aaPredicted RBP15.83■□□□□ 0.12
PTPN6-201ENST00000318974 RTL5Q5HYW3 569 aaPredicted RBP15.82■□□□□ 0.12
PTPN6-201ENST00000318974 RBM42Q9BTD8 480 aaKnown RBP15.82■□□□□ 0.12
PTPN6-201ENST00000318974 ITGB4P16144 1822 aa15.82■□□□□ 0.12
PTPN6-201ENST00000318974 THSD7AQ9UPZ6 1657 aa15.82■□□□□ 0.12
PTPN6-201ENST00000318974 KSR2Q6VAB6 950 aa15.82■□□□□ 0.12
PTPN6-201ENST00000318974 MEIS3Q99687 375 aa15.82■□□□□ 0.12
PTPN6-201ENST00000318974 QTRT2Q9H974 415 aaKnown RBP15.82■□□□□ 0.12
PTPN6-201ENST00000318974 LAMB4A4D0S4 1761 aa15.81■□□□□ 0.12
PTPN6-201ENST00000318974 ADCY9O60503 1353 aa15.81■□□□□ 0.12
PTPN6-201ENST00000318974 AIMP1Q12904 312 aaKnown RBP15.81■□□□□ 0.12
PTPN6-201ENST00000318974 LRP10Q7Z4F1 713 aa15.81■□□□□ 0.12
PTPN6-201ENST00000318974 C1orf115Q9H7X2 142 aa15.81■□□□□ 0.12
PTPN6-201ENST00000318974 DAXXQ9UER7 740 aaPredicted RBP15.81■□□□□ 0.12
PTPN6-201ENST00000318974 ONECUT3O60422 494 aaPredicted RBP15.8■□□□□ 0.12
PTPN6-201ENST00000318974 XAGE3Q8WTP9 111 aa15.8■□□□□ 0.12
PTPN6-201ENST00000318974 SRCIN1Q9C0H9 1055 aa15.8■□□□□ 0.12
PTPN6-201ENST00000318974 MAP3K2Q9Y2U5 619 aa15.8■□□□□ 0.12
PTPN6-201ENST00000318974 PIP4K2AP48426 406 aaPredicted RBP15.8■□□□□ 0.12
PTPN6-201ENST00000318974 COPS6Q7L5N1 327 aa15.8■□□□□ 0.12
PTPN6-201ENST00000318974 BEND3Q5T5X7 828 aa15.79■□□□□ 0.12
PTPN6-201ENST00000318974 DNAJC10Q8IXB1 793 aa15.79■□□□□ 0.12
PTPN6-201ENST00000318974 ATP10DQ9P241 1426 aa15.79■□□□□ 0.12
PTPN6-201ENST00000318974 A1BGP04217 495 aa15.79■□□□□ 0.12
PTPN6-201ENST00000318974 GNAI3P08754 354 aa15.79■□□□□ 0.12
PTPN6-201ENST00000318974 NBPF26B4DH59 902 aa15.78■□□□□ 0.12
PTPN6-201ENST00000318974 STARD3NLO95772 234 aa15.78■□□□□ 0.12
PTPN6-201ENST00000318974 NBPF14Q5TI25 921 aa15.78■□□□□ 0.12
PTPN6-201ENST00000318974 NBPF10Q6P3W6 841 aaKnown RBP15.78■□□□□ 0.12
PTPN6-201ENST00000318974 RIC3Q7Z5B4 369 aa15.78■□□□□ 0.12
PTPN6-201ENST00000318974 NBPF15Q8N660 670 aa15.78■□□□□ 0.12
PTPN6-201ENST00000318974 SEPT12Q8IYM1 358 aa15.78■□□□□ 0.12
PTPN6-201ENST00000318974 KCNQ2O43526 872 aa15.77■□□□□ 0.12
PTPN6-201ENST00000318974 ANKRD13DQ6ZTN6 518 aa15.77■□□□□ 0.12
PTPN6-201ENST00000318974 SLC4A9Q96Q91 983 aa15.77■□□□□ 0.12
PTPN6-201ENST00000318974 ALDH1L1O75891 902 aa15.76■□□□□ 0.11
PTPN6-201ENST00000318974 RPAP2Q8IXW5 612 aaPredicted RBP15.76■□□□□ 0.11
PTPN6-201ENST00000318974 SMC5Q8IY18 1101 aa15.76■□□□□ 0.11
PTPN6-201ENST00000318974 SMARCC1Q92922 1105 aaPredicted RBP15.76■□□□□ 0.11
PTPN6-201ENST00000318974 GNAI2P04899 355 aa15.76■□□□□ 0.11
PTPN6-201ENST00000318974 ANKRD44Q8N8A2 993 aa15.76■□□□□ 0.11
PTPN6-201ENST00000318974 USP44Q9H0E7 712 aa15.76■□□□□ 0.11
PTPN6-201ENST00000318974 ZNF772Q68DY9 489 aaPredicted RBP15.75■□□□□ 0.11
PTPN6-201ENST00000318974 SIRT2Q8IXJ6 389 aa15.75■□□□□ 0.11
PTPN6-201ENST00000318974 LINS1Q8NG48 757 aa15.75■□□□□ 0.11
PTPN6-201ENST00000318974 N4BP2Q86UW6 1770 aaPredicted RBP15.75■□□□□ 0.11
PTPN6-201ENST00000318974 NEXNQ0ZGT2 675 aa15.75■□□□□ 0.11
PTPN6-201ENST00000318974 CEP85Q6P2H3 762 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms