RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 GORABQ5T7V8 394 aa17.01■□□□□ 0.31
PABPC1-201ENST00000318607 SIL1Q9H173 461 aa17.01■□□□□ 0.31
PABPC1-201ENST00000318607 NRXN1Q9ULB1 1477 aa17.01■□□□□ 0.31
PABPC1-201ENST00000318607 PREX1Q8TCU6 1659 aa17.01■□□□□ 0.31
PABPC1-201ENST00000318607 TPD52L1Q16890 204 aaPredicted RBP17.01■□□□□ 0.31
PABPC1-201ENST00000318607 HS1BP3Q53T59 392 aa17.01■□□□□ 0.31
PABPC1-201ENST00000318607 UBTFL1P0CB47 393 aaPredicted RBP17.01■□□□□ 0.31
PABPC1-201ENST00000318607 AMPHP49418 695 aa17■□□□□ 0.31
PABPC1-201ENST00000318607 PIBF1Q8WXW3 757 aa17■□□□□ 0.31
PABPC1-201ENST00000318607 AP5Z1O43299 807 aa17■□□□□ 0.31
PABPC1-201ENST00000318607 USP54Q70EL1 1684 aa16.99■□□□□ 0.31
PABPC1-201ENST00000318607 LARP1BQ659C4 914 aaKnown RBP16.99■□□□□ 0.31
PABPC1-201ENST00000318607 HMGN5P82970 282 aaKnown RBP16.99■□□□□ 0.31
PABPC1-201ENST00000318607 RTL1A6NKG5 1358 aa16.99■□□□□ 0.31
PABPC1-201ENST00000318607 LRRC2Q9BYS8 371 aa16.98■□□□□ 0.31
PABPC1-201ENST00000318607 ZMYM3Q14202 1370 aa16.98■□□□□ 0.31
PABPC1-201ENST00000318607 EIF4A2Q14240 407 aaKnown RBP16.98■□□□□ 0.31
PABPC1-201ENST00000318607 ESF1Q9H501 851 aaKnown RBP16.98■□□□□ 0.31
PABPC1-201ENST00000318607 PHAXQ9H814 394 aaKnown RBP16.98■□□□□ 0.31
PABPC1-201ENST00000318607 ZSCAN22P10073 491 aaPredicted RBP16.98■□□□□ 0.31
PABPC1-201ENST00000318607 ZFP91Q96JP5 570 aaPredicted RBP16.97■□□□□ 0.31
PABPC1-201ENST00000318607 NDUFB9Q9Y6M9 179 aa16.97■□□□□ 0.31
PABPC1-201ENST00000318607 TMEM131LA2VDJ0 1609 aa16.97■□□□□ 0.31
PABPC1-201ENST00000318607 HSP90B1P14625 803 aaKnown RBP16.97■□□□□ 0.31
PABPC1-201ENST00000318607 AIMP1Q12904 312 aaKnown RBP16.97■□□□□ 0.31
PABPC1-201ENST00000318607 LMOD2Q6P5Q4 547 aa16.97■□□□□ 0.31
PABPC1-201ENST00000318607 SMAP1Q8IYB5 467 aaPredicted RBP16.97■□□□□ 0.31
PABPC1-201ENST00000318607 NUDT16Q96DE0 195 aaKnown RBP16.97■□□□□ 0.31
PABPC1-201ENST00000318607 ZSCAN20P17040 1043 aaPredicted RBP16.97■□□□□ 0.31
PABPC1-201ENST00000318607 FLIIQ13045 1269 aa16.97■□□□□ 0.31
PABPC1-201ENST00000318607 ARID5BQ14865 1188 aa16.97■□□□□ 0.31
PABPC1-201ENST00000318607 ADCK5Q3MIX3 580 aa16.97■□□□□ 0.31
PABPC1-201ENST00000318607 PPP1R42Q7Z4L9 355 aa16.97■□□□□ 0.31
PABPC1-201ENST00000318607 MTERF4Q7Z6M4 381 aaKnown RBP16.97■□□□□ 0.31
PABPC1-201ENST00000318607 PA2G4Q9UQ80 394 aaKnown RBP16.97■□□□□ 0.31
PABPC1-201ENST00000318607 MYOM1P52179 1685 aa16.96■□□□□ 0.31
PABPC1-201ENST00000318607 TNNT1P13805 278 aa16.96■□□□□ 0.31
PABPC1-201ENST00000318607 CDK11BP21127 795 aaKnown RBP16.96■□□□□ 0.31
PABPC1-201ENST00000318607 STK11IPQ8N1F8 1099 aa16.96■□□□□ 0.31
PABPC1-201ENST00000318607 BBXQ8WY36 941 aaPredicted RBP16.96■□□□□ 0.31
PABPC1-201ENST00000318607 DACT1Q9NYF0 836 aa16.96■□□□□ 0.31
PABPC1-201ENST00000318607 LIG1P18858 919 aa16.96■□□□□ 0.31
PABPC1-201ENST00000318607 GUCY1B3Q02153 619 aa16.96■□□□□ 0.31
PABPC1-201ENST00000318607 MCM5P33992 734 aa16.95■□□□□ 0.3
PABPC1-201ENST00000318607 TNMDQ9H2S6 317 aa16.95■□□□□ 0.3
PABPC1-201ENST00000318607 NPATQ14207 1427 aa16.95■□□□□ 0.3
PABPC1-201ENST00000318607 COL9A3Q14050 684 aaPredicted RBP16.95■□□□□ 0.3
PABPC1-201ENST00000318607 ANO6Q4KMQ2 910 aa16.95■□□□□ 0.3
PABPC1-201ENST00000318607 DNAJC25Q9H1X3 360 aa16.95■□□□□ 0.3
PABPC1-201ENST00000318607 TMX1Q9H3N1 280 aa16.95■□□□□ 0.3
PABPC1-201ENST00000318607 RPGRIP1LQ68CZ1 1315 aa16.95■□□□□ 0.3
PABPC1-201ENST00000318607 CLEC17AQ6ZS10 378 aa16.95■□□□□ 0.3
PABPC1-201ENST00000318607 PLCD3Q8N3E9 789 aa16.95■□□□□ 0.3
PABPC1-201ENST00000318607 RBM33Q96EV2 1170 aaKnown RBP16.95■□□□□ 0.3
PABPC1-201ENST00000318607 PDRG1Q9NUG6 133 aa16.95■□□□□ 0.3
PABPC1-201ENST00000318607 FAM177A1Q8N128 213 aaPredicted RBP16.94■□□□□ 0.3
PABPC1-201ENST00000318607 GOLGA6L6A8MZA4 724 aa16.94■□□□□ 0.3
PABPC1-201ENST00000318607 CCDC192P0DO97 292 aa16.94■□□□□ 0.3
PABPC1-201ENST00000318607 RUFY3Q7L099 469 aa16.94■□□□□ 0.3
PABPC1-201ENST00000318607 F13A1P00488 732 aa16.94■□□□□ 0.3
PABPC1-201ENST00000318607 MTHFSDQ2M296 383 aaKnown RBP16.94■□□□□ 0.3
PABPC1-201ENST00000318607 ISM2Q6H9L7 571 aa16.94■□□□□ 0.3
PABPC1-201ENST00000318607 CCDC8Q9H0W5 538 aaPredicted RBP16.94■□□□□ 0.3
PABPC1-201ENST00000318607 IQGAP1P46940 1657 aa16.93■□□□□ 0.3
PABPC1-201ENST00000318607 MCM2P49736 904 aa16.93■□□□□ 0.3
PABPC1-201ENST00000318607 KCNF1Q9H3M0 494 aa16.93■□□□□ 0.3
PABPC1-201ENST00000318607 UBE2HP62256 183 aa16.93■□□□□ 0.3
PABPC1-201ENST00000318607 NUP62CLQ9H1M0 184 aa16.93■□□□□ 0.3
PABPC1-201ENST00000318607 LIMCH1Q9UPQ0 1083 aa16.93■□□□□ 0.3
PABPC1-201ENST00000318607 SNX14Q9Y5W7 946 aa16.93■□□□□ 0.3
PABPC1-201ENST00000318607 IBTKQ9P2D0 1353 aaPredicted RBP16.93■□□□□ 0.3
PABPC1-201ENST00000318607 VIRMAQ69YN4 1812 aaKnown RBP16.93■□□□□ 0.3
PABPC1-201ENST00000318607 CYB5RLQ6IPT4 315 aa16.93■□□□□ 0.3
PABPC1-201ENST00000318607 PTH1RQ03431 593 aa16.92■□□□□ 0.3
PABPC1-201ENST00000318607 PTPN21Q16825 1174 aa16.92■□□□□ 0.3
PABPC1-201ENST00000318607 HDGFL1Q5TGJ6 251 aa16.92■□□□□ 0.3
PABPC1-201ENST00000318607 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.92■□□□□ 0.3
PABPC1-201ENST00000318607 ZNF853P0CG23 659 aa16.92■□□□□ 0.3
PABPC1-201ENST00000318607 TAF7Q15545 349 aaPredicted RBP16.92■□□□□ 0.3
PABPC1-201ENST00000318607 CCDC112Q8NEF3 446 aa16.91■□□□□ 0.3
PABPC1-201ENST00000318607 BECN2A8MW95 431 aa16.91■□□□□ 0.3
PABPC1-201ENST00000318607 NBPF7P0C2Y1 421 aaPredicted RBP16.91■□□□□ 0.3
PABPC1-201ENST00000318607 BOLA2Q9H3K6 86 aa16.91■□□□□ 0.3
PABPC1-201ENST00000318607 DMTNQ08495 405 aa16.91■□□□□ 0.3
PABPC1-201ENST00000318607 CDC37L1Q7L3B6 337 aa16.91■□□□□ 0.3
PABPC1-201ENST00000318607 NGDNQ8NEJ9 315 aaKnown RBP16.91■□□□□ 0.3
PABPC1-201ENST00000318607 EDC3Q96F86 508 aaKnown RBP16.91■□□□□ 0.3
PABPC1-201ENST00000318607 PRIMPOLQ96LW4 560 aa16.91■□□□□ 0.3
PABPC1-201ENST00000318607 RIMS2Q9UQ26 1411 aa16.91■□□□□ 0.3
PABPC1-201ENST00000318607 GOLGA6L19H0YKK7 550 aa16.9■□□□□ 0.3
PABPC1-201ENST00000318607 H3BQV1 296 aa16.9■□□□□ 0.3
PABPC1-201ENST00000318607 RAB11FIP3O75154 756 aa16.9■□□□□ 0.3
PABPC1-201ENST00000318607 CCT4P50991 539 aaKnown RBP16.9■□□□□ 0.3
PABPC1-201ENST00000318607 IFFO2Q5TF58 517 aa16.9■□□□□ 0.3
PABPC1-201ENST00000318607 ST7Q9NRC1 585 aa16.9■□□□□ 0.3
PABPC1-201ENST00000318607 NSD2O96028 1365 aa16.9■□□□□ 0.3
PABPC1-201ENST00000318607 TERF1P54274 439 aa16.9■□□□□ 0.3
PABPC1-201ENST00000318607 MAP3K11Q16584 847 aa16.9■□□□□ 0.3
PABPC1-201ENST00000318607 FAM184AQ8NB25 1140 aa16.9■□□□□ 0.3
PABPC1-201ENST00000318607 SPATA32Q96LK8 384 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms