RNA–Protein interactions for RNA: ENST00000317555.6

PGAM5-201, Transcript of PGAM family member 5, mitochondrial serine/threonine protein phosphatase, humanhuman

TSL 1 (best) BASIC

Gene PGAM5, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM5-201ENST00000317555 YBX3P16989 372 aaKnown RBP eCLIP35.5■■■■□ 3.271e-6■■■□□ 15.3
PGAM5-201ENST00000317555 PARP3Q9Y6F1 533 aa35.5■■■■□ 3.27
PGAM5-201ENST00000317555 COL15A1P39059 1388 aa35.5■■■■□ 3.27
PGAM5-201ENST00000317555 ZPR1O75312 459 aa35.49■■■■□ 3.27
PGAM5-201ENST00000317555 DCTN1Q14203 1278 aa35.49■■■■□ 3.27
PGAM5-201ENST00000317555 PLEKHF1Q96S99 279 aa35.49■■■■□ 3.27
PGAM5-201ENST00000317555 MYBBP1AQ9BQG0 1328 aaKnown RBP35.49■■■■□ 3.27
PGAM5-201ENST00000317555 GRIN3BO60391 1043 aa35.48■■■■□ 3.27
PGAM5-201ENST00000317555 FKBP8Q14318 412 aa35.47■■■■□ 3.27
PGAM5-201ENST00000317555 KCNQ3O43525 872 aa35.46■■■■□ 3.27
PGAM5-201ENST00000317555 CANXP27824 592 aaKnown RBP35.46■■■■□ 3.27
PGAM5-201ENST00000317555 MAPK8IP3Q9UPT6 1336 aa35.46■■■■□ 3.27
PGAM5-201ENST00000317555 USPL1Q5W0Q7 1092 aa35.45■■■■□ 3.27
PGAM5-201ENST00000317555 C10orf71Q711Q0 1435 aa35.45■■■■□ 3.27
PGAM5-201ENST00000317555 NARFQ9UHQ1 456 aa35.44■■■■□ 3.26
PGAM5-201ENST00000317555 NFE2L2Q16236 605 aa35.43■■■■□ 3.26
PGAM5-201ENST00000317555 KIAA1551Q9HCM1 1747 aa35.4■■■■□ 3.26
PGAM5-201ENST00000317555 EIF5P55010 431 aaKnown RBP35.4■■■■□ 3.26
PGAM5-201ENST00000317555 TAF7Q15545 349 aaPredicted RBP35.4■■■■□ 3.26
PGAM5-201ENST00000317555 N4BP2Q86UW6 1770 aaPredicted RBP35.4■■■■□ 3.26
PGAM5-201ENST00000317555 PXDNLA1KZ92 1463 aa35.4■■■■□ 3.26
PGAM5-201ENST00000317555 TGFB2P61812 414 aa35.39■■■■□ 3.26
PGAM5-201ENST00000317555 DDR1Q08345 913 aa35.39■■■■□ 3.26
PGAM5-201ENST00000317555 A0A087WZG4 1122 aa35.38■■■■□ 3.25
PGAM5-201ENST00000317555 WWC3Q9ULE0 1092 aa35.38■■■■□ 3.25
PGAM5-201ENST00000317555 TM4SF1P30408 202 aa35.36■■■■□ 3.25
PGAM5-201ENST00000317555 SNRPA1P09661 255 aaKnown RBP35.35■■■■□ 3.25
PGAM5-201ENST00000317555 IL6STP40189 918 aaPredicted RBP35.35■■■■□ 3.25
PGAM5-201ENST00000317555 ZNF330Q9Y3S2 320 aaPredicted RBP35.35■■■■□ 3.25
PGAM5-201ENST00000317555 POLRMTO00411 1230 aaKnown RBP35.34■■■■□ 3.25
PGAM5-201ENST00000317555 A1BGP04217 495 aa35.34■■■■□ 3.25
PGAM5-201ENST00000317555 PRKRIP1Q9H875 184 aaPredicted RBP35.34■■■■□ 3.25
PGAM5-201ENST00000317555 NPM2Q86SE8 214 aaKnown RBP35.33■■■■□ 3.25
PGAM5-201ENST00000317555 KDM3BQ7LBC6 1761 aa35.33■■■■□ 3.25
PGAM5-201ENST00000317555 A0A0G2JLW4 131 aa35.32■■■■□ 3.24
PGAM5-201ENST00000317555 ZNF784Q8NCA9 323 aaPredicted RBP35.32■■■■□ 3.24
PGAM5-201ENST00000317555 PNISRQ8TF01 805 aaKnown RBP35.32■■■■□ 3.24
PGAM5-201ENST00000317555 BCL2L12Q9HB09 334 aa35.32■■■■□ 3.24
PGAM5-201ENST00000317555 USP16Q9Y5T5 823 aa35.32■■■■□ 3.24
PGAM5-201ENST00000317555 SCN7AQ01118 1682 aa35.31■■■■□ 3.24
PGAM5-201ENST00000317555 NFIXQ14938 502 aa35.31■■■■□ 3.24
PGAM5-201ENST00000317555 MIS18AQ9NYP9 233 aa35.31■■■■□ 3.24
PGAM5-201ENST00000317555 AFDNP55196 1824 aaKnown RBP35.31■■■■□ 3.24
PGAM5-201ENST00000317555 PRAMEF22A3QJZ6 481 aa35.3■■■■□ 3.24
PGAM5-201ENST00000317555 THUMPD2Q9BTF0 503 aaKnown RBP35.3■■■■□ 3.24
PGAM5-201ENST00000317555 DPEP1P16444 411 aa35.29■■■■□ 3.24
PGAM5-201ENST00000317555 WDR43Q15061 677 aaKnown RBP eCLIP35.29■■■■□ 3.24
PGAM5-201ENST00000317555 BRCA1P38398 1863 aaKnown RBP35.29■■■■□ 3.24
PGAM5-201ENST00000317555 TBC1D2BQ9UPU7 963 aa35.28■■■■□ 3.24
PGAM5-201ENST00000317555 RIPK4P57078 832 aa35.27■■■■□ 3.24
PGAM5-201ENST00000317555 NRXN2Q9P2S2 1712 aa35.26■■■■□ 3.24
PGAM5-201ENST00000317555 LAMB4A4D0S4 1761 aa35.26■■■■□ 3.24
PGAM5-201ENST00000317555 BCS1LQ9Y276 419 aa35.24■■■■□ 3.23
PGAM5-201ENST00000317555 SERPINB2P05120 415 aa35.23■■■■□ 3.23
PGAM5-201ENST00000317555 TMPOP42166 694 aaKnown RBP35.23■■■■□ 3.23
PGAM5-201ENST00000317555 PIP4K2AP48426 406 aaPredicted RBP35.23■■■■□ 3.23
PGAM5-201ENST00000317555 BICDL1Q6ZP65 573 aa35.23■■■■□ 3.23
PGAM5-201ENST00000317555 CCDC146Q8IYE0 955 aa35.23■■■■□ 3.23
PGAM5-201ENST00000317555 BCORQ6W2J9 1755 aa35.23■■■■□ 3.23
PGAM5-201ENST00000317555 LMOD3Q0VAK6 560 aa35.22■■■■□ 3.23
PGAM5-201ENST00000317555 KCNA3P22001 575 aa35.21■■■■□ 3.23
PGAM5-201ENST00000317555 DZIP3Q86Y13 1208 aaKnown RBP35.21■■■■□ 3.23
PGAM5-201ENST00000317555 TBC1D9BQ66K14 1250 aa35.2■■■■□ 3.23
PGAM5-201ENST00000317555 CAMTA2O94983 1202 aa35.19■■■■□ 3.22
PGAM5-201ENST00000317555 EIF4A1P60842 406 aaKnown RBP35.19■■■■□ 3.22
PGAM5-201ENST00000317555 RUNDC1Q96C34 613 aa35.19■■■■□ 3.22
PGAM5-201ENST00000317555 PIM2Q9P1W9 311 aa35.19■■■■□ 3.22
PGAM5-201ENST00000317555 ADAMTS8Q9UP79 889 aa35.18■■■■□ 3.22
PGAM5-201ENST00000317555 ARFGEF1Q9Y6D6 1849 aa35.18■■■■□ 3.22
PGAM5-201ENST00000317555 GIGYF1O75420 1035 aaPredicted RBP35.17■■■■□ 3.22
PGAM5-201ENST00000317555 RRP7AQ9Y3A4 280 aaKnown RBP35.17■■■■□ 3.22
PGAM5-201ENST00000317555 NBPF26B4DH59 902 aa35.16■■■■□ 3.22
PGAM5-201ENST00000317555 CHRNA5P30532 468 aa35.16■■■■□ 3.22
PGAM5-201ENST00000317555 NBPF10Q6P3W6 841 aaKnown RBP35.16■■■■□ 3.22
PGAM5-201ENST00000317555 NBPF15Q8N660 670 aa35.16■■■■□ 3.22
PGAM5-201ENST00000317555 TSPYL4Q9UJ04 414 aa35.16■■■■□ 3.22
PGAM5-201ENST00000317555 CARMIL3Q8ND23 1372 aa35.15■■■■□ 3.22
PGAM5-201ENST00000317555 NEUROD2Q15784 382 aa35.15■■■■□ 3.22
PGAM5-201ENST00000317555 DALRD3Q5D0E6 543 aaKnown RBP35.12■■■■□ 3.21
PGAM5-201ENST00000317555 SETDB2Q96T68 719 aa35.12■■■■□ 3.21
PGAM5-201ENST00000317555 BABAM1Q9NWV8 329 aa35.11■■■■□ 3.21
PGAM5-201ENST00000317555 ZNF652Q9Y2D9 606 aa35.11■■■■□ 3.21
PGAM5-201ENST00000317555 DLEC1Q9Y238 1755 aa35.1■■■■□ 3.21
PGAM5-201ENST00000317555 ZNF316A6NFI3 1004 aaPredicted RBP35.1■■■■□ 3.21
PGAM5-201ENST00000317555 CLEC4GQ6UXB4 293 aa35.1■■■■□ 3.21
PGAM5-201ENST00000317555 ARHGAP27Q6ZUM4 889 aa35.09■■■■□ 3.21
PGAM5-201ENST00000317555 ATP10DQ9P241 1426 aa35.08■■■■□ 3.21
PGAM5-201ENST00000317555 ADCY9O60503 1353 aa35.08■■■■□ 3.21
PGAM5-201ENST00000317555 ANKRD31Q8N7Z5 1873 aa35.07■■■■□ 3.21
PGAM5-201ENST00000317555 PRR5LQ6MZQ0 368 aa35.07■■■■□ 3.2
PGAM5-201ENST00000317555 RGL2O15211 777 aa35.06■■■■□ 3.2
PGAM5-201ENST00000317555 TRIM35Q9UPQ4 493 aa35.06■■■■□ 3.2
PGAM5-201ENST00000317555 NPHP1O15259 732 aa35.05■■■■□ 3.2
PGAM5-201ENST00000317555 C2CD5Q86YS7 1000 aa35.05■■■■□ 3.2
PGAM5-201ENST00000317555 CNBD1Q8NA66 436 aa35.05■■■■□ 3.2
PGAM5-201ENST00000317555 H0YIN7 160 aa35.04■■■■□ 3.2
PGAM5-201ENST00000317555 BRIP1Q9BX63 1249 aa35.04■■■■□ 3.2
PGAM5-201ENST00000317555 NGEFQ8N5V2 710 aa35.02■■■■□ 3.2
PGAM5-201ENST00000317555 PDE6BP35913 854 aa35.01■■■■□ 3.2
PGAM5-201ENST00000317555 CCDC24Q8N4L8 307 aa35.01■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 230.3 ms