RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 LRRN4CLQ8ND94 238 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 TSPYL1Q9H0U9 437 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 MBIPQ9NS73 344 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 HDAC5Q9UQL6 1122 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 YLPM1P49750 1951 aaKnown RBP4.38□□□□□ -1.71
GEN1-201ENST00000317402 NPHP1O15259 732 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 CLSTN1O94985 981 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 INCENPQ9NQS7 918 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 WNK1Q9H4A3 2382 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 VCANP13611 3396 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 ABCC1P33527 1531 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 PRPF40AO75400 957 aaKnown RBP4.38□□□□□ -1.71
GEN1-201ENST00000317402 STK3Q13188 491 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 SULT6B1Q6IMI4 303 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 NPC1L1Q9UHC9 1359 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 SBNO2Q9Y2G9 1366 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 HECW2Q9P2P5 1572 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 PNMA6EA0A0J9YXQ4 647 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 LTKP29376 864 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 MYOM2P54296 1465 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 LGR6Q9HBX8 967 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 KIF13AQ9H1H9 1805 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 TBC1D9Q6ZT07 1266 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 CHST3Q7LGC8 479 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 C22orf23Q9BZE7 217 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.38□□□□□ -1.71
GEN1-201ENST00000317402 PDE3BQ13370 1112 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 ISM2Q6H9L7 571 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 CAVIN1Q6NZI2 390 aaKnown RBP4.38□□□□□ -1.71
GEN1-201ENST00000317402 GPHNQ9NQX3 736 aaPredicted RBP4.38□□□□□ -1.71
GEN1-201ENST00000317402 PLCH2O75038 1416 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 CHD5Q8TDI0 1954 aa4.38□□□□□ -1.71
GEN1-201ENST00000317402 TEX35Q5T0J7 233 aa4.37□□□□□ -1.71
GEN1-201ENST00000317402 ARHGEF40Q8TER5 1519 aa4.37□□□□□ -1.71
GEN1-201ENST00000317402 IQGAP1P46940 1657 aa4.37□□□□□ -1.71
GEN1-201ENST00000317402 ZCCHC11Q5TAX3 1644 aaKnown RBP4.37□□□□□ -1.71
GEN1-201ENST00000317402 PRIM1P49642 420 aaKnown RBP4.37□□□□□ -1.71
GEN1-201ENST00000317402 CCDC129Q6ZRS4 1044 aa4.37□□□□□ -1.71
GEN1-201ENST00000317402 OSCARQ8IYS5 282 aa4.37□□□□□ -1.71
GEN1-201ENST00000317402 PDCL3Q9H2J4 239 aa4.37□□□□□ -1.71
GEN1-201ENST00000317402 SNAP23O00161 211 aa4.37□□□□□ -1.71
GEN1-201ENST00000317402 RALBP1Q15311 655 aa4.37□□□□□ -1.71
GEN1-201ENST00000317402 PROSER3Q2NL68 480 aa4.37□□□□□ -1.71
GEN1-201ENST00000317402 CERS3Q8IU89 383 aa4.37□□□□□ -1.71
GEN1-201ENST00000317402 SSR1P43307 286 aaKnown RBP4.37□□□□□ -1.71
GEN1-201ENST00000317402 EVX2Q03828 476 aa4.37□□□□□ -1.71
GEN1-201ENST00000317402 PPLO60437 1756 aa4.37□□□□□ -1.71
GEN1-201ENST00000317402 GLI2P10070 1586 aa4.37□□□□□ -1.71
GEN1-201ENST00000317402 SPG7Q9UQ90 795 aa4.37□□□□□ -1.71
GEN1-201ENST00000317402 TRPM1Q7Z4N2 1603 aa4.37□□□□□ -1.71
GEN1-201ENST00000317402 TMPOP42166 694 aaKnown RBP4.37□□□□□ -1.71
GEN1-201ENST00000317402 CALD1Q05682 793 aaKnown RBP4.37□□□□□ -1.71
GEN1-201ENST00000317402 ERVK-7P63135 1459 aa4.37□□□□□ -1.71
GEN1-201ENST00000317402 CEBPZQ03701 1054 aaKnown RBP4.37□□□□□ -1.71
GEN1-201ENST00000317402 CAMK4Q16566 473 aa4.37□□□□□ -1.71
GEN1-201ENST00000317402 FAM182AQ5T1J6 154 aa4.37□□□□□ -1.71
GEN1-201ENST00000317402 PPP6R1Q9UPN7 881 aa4.37□□□□□ -1.71
GEN1-201ENST00000317402 BRCA2P51587 3418 aa4.37□□□□□ -1.71
GEN1-201ENST00000317402 CSPP1Q1MSJ5 1256 aa4.37□□□□□ -1.71
GEN1-201ENST00000317402 HSP90AA4PQ58FG1 418 aa4.37□□□□□ -1.71
GEN1-201ENST00000317402 PUS7Q96PZ0 661 aaKnown RBP4.37□□□□□ -1.71
GEN1-201ENST00000317402 CWC15Q9P013 229 aaKnown RBP4.37□□□□□ -1.71
GEN1-201ENST00000317402 VWDEQ8N2E2 1590 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 IFT172Q9UG01 1749 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 OTUD7BQ6GQQ9 843 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 DNAJC2Q99543 621 aaKnown RBP4.36□□□□□ -1.71
GEN1-201ENST00000317402 SIL1Q9H173 461 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 FERMT3Q86UX7 667 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 SPC24Q8NBT2 197 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 NRBP1Q9UHY1 535 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 MYO5AQ9Y4I1 1855 aaKnown RBP4.36□□□□□ -1.71
GEN1-201ENST00000317402 FANCAO15360 1455 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 RILPL2Q969X0 211 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 ORAI2Q96SN7 254 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 ANKRD26Q9UPS8 1709 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 A0A0U1RQJ8 604 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 SP100P23497 879 aaPredicted RBP4.36□□□□□ -1.71
GEN1-201ENST00000317402 MCM4P33991 863 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 ATRIPQ8WXE1 791 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 UIMC1Q96RL1 719 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 TMEM63CQ9P1W3 806 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 PRR14LQ5THK1 2151 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 FER1L5A0AVI2 2057 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 BRD4O60885 1362 aaPredicted RBP4.36□□□□□ -1.71
GEN1-201ENST00000317402 PHF14O94880 888 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 SYNE4Q8N205 404 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 PRR36Q9H6K5 1346 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 ANKRD36A6QL64 1941 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 ZMYM3Q14202 1370 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 ATP7AQ04656 1500 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 MYL6BP14649 208 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 GUCY1B3Q02153 619 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 MPRIPQ6WCQ1 1025 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 DEF6Q9H4E7 631 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 PPIP5K1Q6PFW1 1433 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 SPTAN1Q13813 2472 aaKnown RBP4.36□□□□□ -1.71
GEN1-201ENST00000317402 ZNF518AQ6AHZ1 1483 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 CNOT1A5YKK6 2376 aaKnown RBP4.36□□□□□ -1.71
GEN1-201ENST00000317402 TFRCP02786 760 aaKnown RBP4.36□□□□□ -1.71
GEN1-201ENST00000317402 TBC1D32Q96NH3 1257 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms