RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 TEX13AQ9BXU3 409 aaPredicted RBP20.6■□□□□ 0.89
TUBB3-201ENST00000315491 LAMB4A4D0S4 1761 aa20.6■□□□□ 0.89
TUBB3-201ENST00000315491 IRX6P78412 446 aaPredicted RBP20.59■□□□□ 0.89
TUBB3-201ENST00000315491 DBF4Q9UBU7 674 aaPredicted RBP20.59■□□□□ 0.89
TUBB3-201ENST00000315491 BTAF1O14981 1849 aa20.59■□□□□ 0.89
TUBB3-201ENST00000315491 DNAJC10Q8IXB1 793 aa20.59■□□□□ 0.89
TUBB3-201ENST00000315491 LOC102724428A0A0B4J2F2 783 aa20.58■□□□□ 0.89
TUBB3-201ENST00000315491 SIK1P57059 783 aa20.58■□□□□ 0.89
TUBB3-201ENST00000315491 ARHGAP45Q92619 1136 aa20.58■□□□□ 0.89
TUBB3-201ENST00000315491 TRIM37O94972 964 aa20.57■□□□□ 0.88
TUBB3-201ENST00000315491 ATF7IPQ6VMQ6 1270 aa20.57■□□□□ 0.88
TUBB3-201ENST00000315491 G2E3Q7L622 706 aa20.57■□□□□ 0.88
TUBB3-201ENST00000315491 DDX21Q9NR30 783 aaKnown RBP eCLIP20.57■□□□□ 0.88
TUBB3-201ENST00000315491 PDIA6Q15084 440 aa20.57■□□□□ 0.88
TUBB3-201ENST00000315491 C20orf194Q5TEA3 1177 aa20.57■□□□□ 0.88
TUBB3-201ENST00000315491 PTPRCP08575 1304 aa20.56■□□□□ 0.88
TUBB3-201ENST00000315491 ERBB4Q15303 1308 aa20.56■□□□□ 0.88
TUBB3-201ENST00000315491 ANXA1P04083 346 aa20.56■□□□□ 0.88
TUBB3-201ENST00000315491 TRIM27P14373 513 aa20.56■□□□□ 0.88
TUBB3-201ENST00000315491 ATP6V1AP38606 617 aa20.56■□□□□ 0.88
TUBB3-201ENST00000315491 PDE3AQ14432 1141 aa20.56■□□□□ 0.88
TUBB3-201ENST00000315491 PROSER3Q2NL68 480 aa20.56■□□□□ 0.88
TUBB3-201ENST00000315491 TNNQ9UQP3 1299 aa20.56■□□□□ 0.88
TUBB3-201ENST00000315491 STARD3NLO95772 234 aa20.55■□□□□ 0.88
TUBB3-201ENST00000315491 MS4A1P11836 297 aa20.55■□□□□ 0.88
TUBB3-201ENST00000315491 FLIIQ13045 1269 aa20.55■□□□□ 0.88
TUBB3-201ENST00000315491 FKBP8Q14318 412 aa20.55■□□□□ 0.88
TUBB3-201ENST00000315491 API5Q9BZZ5 524 aaKnown RBP20.55■□□□□ 0.88
TUBB3-201ENST00000315491 HYPKQ9NX55 129 aa20.55■□□□□ 0.88
TUBB3-201ENST00000315491 PHAXQ9H814 394 aaKnown RBP20.54■□□□□ 0.88
TUBB3-201ENST00000315491 TJP1Q07157 1748 aa20.54■□□□□ 0.88
TUBB3-201ENST00000315491 DZIP1LQ8IYY4 767 aaKnown RBP20.54■□□□□ 0.88
TUBB3-201ENST00000315491 CLUAP1Q96AJ1 413 aa20.54■□□□□ 0.88
TUBB3-201ENST00000315491 A1BGP04217 495 aa20.53■□□□□ 0.88
TUBB3-201ENST00000315491 CYP19A1P11511 503 aaPredicted RBP20.53■□□□□ 0.88
TUBB3-201ENST00000315491 MYL6BP14649 208 aa20.53■□□□□ 0.88
TUBB3-201ENST00000315491 FTSJ3Q8IY81 847 aaKnown RBP20.53■□□□□ 0.88
TUBB3-201ENST00000315491 PANK1Q8TE04 598 aa20.53■□□□□ 0.88
TUBB3-201ENST00000315491 CICQ96RK0 1608 aaPredicted RBP20.53■□□□□ 0.88
TUBB3-201ENST00000315491 CACNA1FO60840 1977 aa20.52■□□□□ 0.88
TUBB3-201ENST00000315491 ITPK1Q13572 414 aa20.52■□□□□ 0.88
TUBB3-201ENST00000315491 NBPF26B4DH59 902 aa20.51■□□□□ 0.87
TUBB3-201ENST00000315491 RLBP1P12271 317 aa20.51■□□□□ 0.87
TUBB3-201ENST00000315491 PIP4K2AP48426 406 aaPredicted RBP20.51■□□□□ 0.87
TUBB3-201ENST00000315491 FKBP5Q13451 457 aaPredicted RBP20.51■□□□□ 0.87
TUBB3-201ENST00000315491 ZNF831Q5JPB2 1677 aa20.51■□□□□ 0.87
TUBB3-201ENST00000315491 NBPF14Q5TI25 921 aa20.51■□□□□ 0.87
TUBB3-201ENST00000315491 NBPF10Q6P3W6 841 aaKnown RBP20.51■□□□□ 0.87
TUBB3-201ENST00000315491 NBPF15Q8N660 670 aa20.51■□□□□ 0.87
TUBB3-201ENST00000315491 LRP10Q7Z4F1 713 aa20.51■□□□□ 0.87
TUBB3-201ENST00000315491 CRBNQ96SW2 442 aa20.51■□□□□ 0.87
TUBB3-201ENST00000315491 ABCC4O15439 1325 aa20.49■□□□□ 0.87
TUBB3-201ENST00000315491 CCNL1Q9UK58 526 aaPredicted RBP20.49■□□□□ 0.87
TUBB3-201ENST00000315491 LY75O60449 1722 aa20.49■□□□□ 0.87
TUBB3-201ENST00000315491 XAGE3Q8WTP9 111 aa20.48■□□□□ 0.87
TUBB3-201ENST00000315491 COG6Q9Y2V7 657 aa20.48■□□□□ 0.87
TUBB3-201ENST00000315491 AIMP1Q12904 312 aaKnown RBP20.47■□□□□ 0.87
TUBB3-201ENST00000315491 COPS6Q7L5N1 327 aa20.47■□□□□ 0.87
TUBB3-201ENST00000315491 TMEM57Q8N5G2 664 aa20.47■□□□□ 0.87
TUBB3-201ENST00000315491 EXOC6Q8TAG9 804 aa20.47■□□□□ 0.87
TUBB3-201ENST00000315491 ZBTB1Q9Y2K1 713 aa20.47■□□□□ 0.87
TUBB3-201ENST00000315491 F6X3S4 739 aa20.46■□□□□ 0.87
TUBB3-201ENST00000315491 DDX58O95786 925 aaKnown RBP20.46■□□□□ 0.87
TUBB3-201ENST00000315491 CRKLP46109 303 aaKnown RBP20.46■□□□□ 0.87
TUBB3-201ENST00000315491 KCNQ4P56696 695 aa20.46■□□□□ 0.87
TUBB3-201ENST00000315491 LINC00116Q8NCU8 138 aa20.46■□□□□ 0.87
TUBB3-201ENST00000315491 CCDC87Q9NVE4 849 aa20.46■□□□□ 0.87
TUBB3-201ENST00000315491 APBA3O96018 575 aa20.46■□□□□ 0.87
TUBB3-201ENST00000315491 MVPQ14764 893 aaKnown RBP20.46■□□□□ 0.87
TUBB3-201ENST00000315491 ERICH6BQ5W0A0 696 aa20.46■□□□□ 0.87
TUBB3-201ENST00000315491 INTS5Q6P9B9 1019 aaKnown RBP20.46■□□□□ 0.87
TUBB3-201ENST00000315491 COL5A3P25940 1745 aaPredicted RBP20.45■□□□□ 0.86
TUBB3-201ENST00000315491 PI4KAP2A4QPH2 592 aa20.44■□□□□ 0.86
TUBB3-201ENST00000315491 PLSCR1O15162 318 aa20.44■□□□□ 0.86
TUBB3-201ENST00000315491 SLC27A3Q5K4L6 730 aa20.44■□□□□ 0.86
TUBB3-201ENST00000315491 KSR2Q6VAB6 950 aa20.44■□□□□ 0.86
TUBB3-201ENST00000315491 ITPRIPQ8IWB1 547 aa20.44■□□□□ 0.86
TUBB3-201ENST00000315491 PI4KAP1Q8N8J0 262 aa20.44■□□□□ 0.86
TUBB3-201ENST00000315491 ADCY9O60503 1353 aa20.44■□□□□ 0.86
TUBB3-201ENST00000315491 CNTNAP4Q9C0A0 1308 aa20.44■□□□□ 0.86
TUBB3-201ENST00000315491 IL6STP40189 918 aaPredicted RBP20.44■□□□□ 0.86
TUBB3-201ENST00000315491 SLC4A10Q6U841 1118 aa20.44■□□□□ 0.86
TUBB3-201ENST00000315491 RBM19Q9Y4C8 960 aaKnown RBP20.44■□□□□ 0.86
TUBB3-201ENST00000315491 RREB1Q92766 1687 aa20.43■□□□□ 0.86
TUBB3-201ENST00000315491 TNS1Q9HBL0 1735 aaKnown RBP20.43■□□□□ 0.86
TUBB3-201ENST00000315491 INTS3Q68E01 1043 aaKnown RBP20.43■□□□□ 0.86
TUBB3-201ENST00000315491 DNAAF4Q8WXU2 420 aa20.43■□□□□ 0.86
TUBB3-201ENST00000315491 ZNF330Q9Y3S2 320 aaPredicted RBP20.43■□□□□ 0.86
TUBB3-201ENST00000315491 PXDNLA1KZ92 1463 aa20.42■□□□□ 0.86
TUBB3-201ENST00000315491 TTLL7Q6ZT98 887 aa20.42■□□□□ 0.86
TUBB3-201ENST00000315491 RIC3Q7Z5B4 369 aa20.42■□□□□ 0.86
TUBB3-201ENST00000315491 LRRC4BQ9NT99 713 aa20.42■□□□□ 0.86
TUBB3-201ENST00000315491 MAP3K2Q9Y2U5 619 aa20.42■□□□□ 0.86
TUBB3-201ENST00000315491 CCT4P50991 539 aaKnown RBP20.41■□□□□ 0.86
TUBB3-201ENST00000315491 RC3H1Q5TC82 1133 aaKnown RBP20.41■□□□□ 0.86
TUBB3-201ENST00000315491 ANKRD13DQ6ZTN6 518 aa20.41■□□□□ 0.86
TUBB3-201ENST00000315491 DDX19BQ9UMR2 479 aa20.41■□□□□ 0.86
TUBB3-201ENST00000315491 TXNRD1Q16881 649 aa20.41■□□□□ 0.86
TUBB3-201ENST00000315491 PLBD2Q8NHP8 589 aa20.41■□□□□ 0.86
TUBB3-201ENST00000315491 EIF5P55010 431 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms