RNA–Protein interactions for RNA: ENST00000314992.9

EXD1-201, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EXD1, Length 2,942 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-201ENST00000314992 FXR1P51114 621 aaKnown RBP eCLIP7.74□□□□□ -1.17
EXD1-201ENST00000314992 ZMYND15Q9H091 742 aa7.74□□□□□ -1.17
EXD1-201ENST00000314992 SCN4AP35499 1836 aa7.74□□□□□ -1.17
EXD1-201ENST00000314992 FRAT2O75474 233 aaPredicted RBP7.74□□□□□ -1.17
EXD1-201ENST00000314992 GCP02774 474 aa7.74□□□□□ -1.17
EXD1-201ENST00000314992 RGS3P49796 1198 aa7.74□□□□□ -1.17
EXD1-201ENST00000314992 MNX1P50219 401 aaPredicted RBP7.74□□□□□ -1.17
EXD1-201ENST00000314992 MVPQ14764 893 aaKnown RBP7.74□□□□□ -1.17
EXD1-201ENST00000314992 ZNF428Q96B54 188 aa7.74□□□□□ -1.17
EXD1-201ENST00000314992 PCDHB15Q9Y5E8 787 aa7.74□□□□□ -1.17
EXD1-201ENST00000314992 EVC2Q86UK5 1308 aa7.73□□□□□ -1.17
EXD1-201ENST00000314992 CA12O43570 354 aa7.73□□□□□ -1.17
EXD1-201ENST00000314992 L1TD1Q5T7N2 865 aaKnown RBP7.73□□□□□ -1.17
EXD1-201ENST00000314992 CHADLQ6NUI6 762 aa7.73□□□□□ -1.17
EXD1-201ENST00000314992 PANK1Q8TE04 598 aa7.73□□□□□ -1.17
EXD1-201ENST00000314992 UPF2Q9HAU5 1272 aaKnown RBP7.73□□□□□ -1.17
EXD1-201ENST00000314992 COG6Q9Y2V7 657 aa7.73□□□□□ -1.17
EXD1-201ENST00000314992 MAP2P11137 1827 aaKnown RBP7.73□□□□□ -1.17
EXD1-201ENST00000314992 WASLO00401 505 aaPredicted RBP7.72□□□□□ -1.17
EXD1-201ENST00000314992 SLC4A3P48751 1232 aa7.72□□□□□ -1.17
EXD1-201ENST00000314992 ZKSCAN2Q63HK3 967 aa7.72□□□□□ -1.17
EXD1-201ENST00000314992 VSIG10Q8N0Z9 540 aa7.72□□□□□ -1.17
EXD1-201ENST00000314992 PLEKHF1Q96S99 279 aa7.72□□□□□ -1.17
EXD1-201ENST00000314992 ISY1Q9ULR0 285 aaKnown RBP7.72□□□□□ -1.17
EXD1-201ENST00000314992 PDZRN3Q9UPQ7 1066 aa7.72□□□□□ -1.17
EXD1-201ENST00000314992 RBBP6Q7Z6E9 1792 aaKnown RBP7.72□□□□□ -1.17
EXD1-201ENST00000314992 SMC5Q8IY18 1101 aa7.72□□□□□ -1.17
EXD1-201ENST00000314992 SEC24BO95487 1268 aa7.72□□□□□ -1.17
EXD1-201ENST00000314992 KCNA3P22001 575 aa7.72□□□□□ -1.17
EXD1-201ENST00000314992 MTHFSP49914 203 aa7.72□□□□□ -1.17
EXD1-201ENST00000314992 RLBP1P12271 317 aa7.71□□□□□ -1.18
EXD1-201ENST00000314992 PNNQ9H307 717 aaKnown RBP7.71□□□□□ -1.18
EXD1-201ENST00000314992 FSD2A1L4K1 749 aa7.71□□□□□ -1.18
EXD1-201ENST00000314992 CANXP27824 592 aaKnown RBP7.71□□□□□ -1.18
EXD1-201ENST00000314992 ALDH1L2Q3SY69 923 aa7.71□□□□□ -1.18
EXD1-201ENST00000314992 SLC12A5Q9H2X9 1139 aa7.71□□□□□ -1.18
EXD1-201ENST00000314992 MKRN1Q9UHC7 482 aaKnown RBP7.71□□□□□ -1.18
EXD1-201ENST00000314992 DZIP1LQ8IYY4 767 aaKnown RBP7.7□□□□□ -1.18
EXD1-201ENST00000314992 SNX21Q969T3 373 aa7.7□□□□□ -1.18
EXD1-201ENST00000314992 DDX19BQ9UMR2 479 aa7.7□□□□□ -1.18
EXD1-201ENST00000314992 KIF16BQ96L93 1317 aa7.7□□□□□ -1.18
EXD1-201ENST00000314992 TBC1D2Q9BYX2 928 aa7.7□□□□□ -1.18
EXD1-201ENST00000314992 TMEM88BA6NKF7 163 aa7.69□□□□□ -1.18
EXD1-201ENST00000314992 DDIT3P35638 169 aa7.69□□□□□ -1.18
EXD1-201ENST00000314992 RBM25P49756 843 aaKnown RBP7.69□□□□□ -1.18
EXD1-201ENST00000314992 TOM1L2Q6ZVM7 507 aa7.69□□□□□ -1.18
EXD1-201ENST00000314992 CD163L1Q9NR16 1453 aa7.69□□□□□ -1.18
EXD1-201ENST00000314992 ARHGAP27Q6ZUM4 889 aa7.69□□□□□ -1.18
EXD1-201ENST00000314992 RSPH6AQ9H0K4 717 aa7.69□□□□□ -1.18
EXD1-201ENST00000314992 CHMP4BQ9H444 224 aaKnown RBP7.69□□□□□ -1.18
EXD1-201ENST00000314992 CIZ1Q9ULV3 898 aaPredicted RBP7.69□□□□□ -1.18
EXD1-201ENST00000314992 WDR33Q9C0J8 1336 aaKnown RBP7.69□□□□□ -1.18
EXD1-201ENST00000314992 ARHGEF25Q86VW2 580 aa7.68□□□□□ -1.18
EXD1-201ENST00000314992 CHMP5Q9NZZ3 219 aa7.68□□□□□ -1.18
EXD1-201ENST00000314992 TRIM35Q9UPQ4 493 aa7.68□□□□□ -1.18
EXD1-201ENST00000314992 KIF24Q5T7B8 1368 aa7.68□□□□□ -1.18
EXD1-201ENST00000314992 NRXN2Q9P2S2 1712 aa7.68□□□□□ -1.18
EXD1-201ENST00000314992 PTMSP20962 102 aa7.68□□□□□ -1.18
EXD1-201ENST00000314992 SSFA2P28290 1259 aa7.68□□□□□ -1.18
EXD1-201ENST00000314992 TMPOP42166 694 aaKnown RBP7.68□□□□□ -1.18
EXD1-201ENST00000314992 NBPF15Q8N660 670 aa7.68□□□□□ -1.18
EXD1-201ENST00000314992 NGDNQ8NEJ9 315 aaKnown RBP7.68□□□□□ -1.18
EXD1-201ENST00000314992 ARHGAP45Q92619 1136 aa7.68□□□□□ -1.18
EXD1-201ENST00000314992 PRAM1Q96QH2 718 aa7.68□□□□□ -1.18
EXD1-201ENST00000314992 KIF20BQ96Q89 1820 aa7.68□□□□□ -1.18
EXD1-201ENST00000314992 IPO8O15397 1037 aaKnown RBP7.68□□□□□ -1.18
EXD1-201ENST00000314992 ZBTB40Q9NUA8 1239 aa7.68□□□□□ -1.18
EXD1-201ENST00000314992 STK26Q9P289 416 aa7.68□□□□□ -1.18
EXD1-201ENST00000314992 TRAK1Q9UPV9 953 aa7.68□□□□□ -1.18
EXD1-201ENST00000314992 ITGBL1O95965 494 aaPredicted RBP7.67□□□□□ -1.18
EXD1-201ENST00000314992 MCM4P33991 863 aa7.67□□□□□ -1.18
EXD1-201ENST00000314992 ATF7IPQ6VMQ6 1270 aa7.67□□□□□ -1.18
EXD1-201ENST00000314992 A0A1W2PP64 1363 aa7.67□□□□□ -1.18
EXD1-201ENST00000314992 ZNF692Q9BU19 519 aaPredicted RBP7.67□□□□□ -1.18
EXD1-201ENST00000314992 AXIN2Q9Y2T1 843 aa7.67□□□□□ -1.18
EXD1-201ENST00000314992 MAP2K2P36507 400 aa7.66□□□□□ -1.18
EXD1-201ENST00000314992 NUCB1Q02818 461 aa7.66□□□□□ -1.18
EXD1-201ENST00000314992 C22orf23Q9BZE7 217 aa7.66□□□□□ -1.18
EXD1-201ENST00000314992 RNF181Q9P0P0 153 aa7.66□□□□□ -1.18
EXD1-201ENST00000314992 FCHSD2O94868 740 aa7.66□□□□□ -1.18
EXD1-201ENST00000314992 TRIM27P14373 513 aa7.66□□□□□ -1.18
EXD1-201ENST00000314992 MSL1Q68DK7 614 aa7.65□□□□□ -1.18
EXD1-201ENST00000314992 CLEC17AQ6ZS10 378 aa7.65□□□□□ -1.18
EXD1-201ENST00000314992 LDHDQ86WU2 507 aa7.65□□□□□ -1.18
EXD1-201ENST00000314992 TERF2IPQ9NYB0 399 aa7.65□□□□□ -1.18
EXD1-201ENST00000314992 CCNL1Q9UK58 526 aaPredicted RBP7.65□□□□□ -1.18
EXD1-201ENST00000314992 U2AF1L5P0DN76 240 aaPredicted RBP7.65□□□□□ -1.18
EXD1-201ENST00000314992 U2AF1Q01081 240 aaKnown RBP eCLIP7.65□□□□□ -1.18
EXD1-201ENST00000314992 TMEM132EQ6IEE7 984 aa7.65□□□□□ -1.18
EXD1-201ENST00000314992 SSH1Q8WYL5 1049 aa7.65□□□□□ -1.18
EXD1-201ENST00000314992 ACSBG1Q96GR2 724 aa7.65□□□□□ -1.18
EXD1-201ENST00000314992 CFAP44Q96MT7 982 aa7.65□□□□□ -1.18
EXD1-201ENST00000314992 POGKQ9P215 609 aa7.65□□□□□ -1.18
EXD1-201ENST00000314992 ERBB3P21860 1342 aa7.65□□□□□ -1.19
EXD1-201ENST00000314992 DDX11L8A8MPP1 907 aa7.65□□□□□ -1.19
EXD1-201ENST00000314992 BMP2KLQ5H9B9 411 aa7.65□□□□□ -1.19
EXD1-201ENST00000314992 HHIPL1Q96JK4 782 aa7.65□□□□□ -1.19
EXD1-201ENST00000314992 L3MBTL3Q96JM7 780 aaPredicted RBP7.65□□□□□ -1.19
EXD1-201ENST00000314992 CALD1Q05682 793 aaKnown RBP7.64□□□□□ -1.19
EXD1-201ENST00000314992 EXOSC9Q06265 439 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms