RNA–Protein interactions for RNA: ENST00000311895.7

ERCC4-201, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC4, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-201ENST00000311895 POLR3DP05423 398 aaPredicted RBP9.91□□□□□ -0.82
ERCC4-201ENST00000311895 CNNM3Q8NE01 707 aa9.91□□□□□ -0.82
ERCC4-201ENST00000311895 TOP2BQ02880 1626 aa9.91□□□□□ -0.82
ERCC4-201ENST00000311895 RAPGEF3O95398 923 aa9.91□□□□□ -0.82
ERCC4-201ENST00000311895 CHMP4BP1P59074 171 aa9.9□□□□□ -0.82
ERCC4-201ENST00000311895 RNF187Q5TA31 235 aaPredicted RBP9.9□□□□□ -0.82
ERCC4-201ENST00000311895 SCAND2PQ9GZW5 306 aaPredicted RBP9.9□□□□□ -0.82
ERCC4-201ENST00000311895 TICAM2Q86XR7 235 aa9.9□□□□□ -0.82
ERCC4-201ENST00000311895 NAPBQ9H115 298 aa9.9□□□□□ -0.82
ERCC4-201ENST00000311895 LIMCH1Q9UPQ0 1083 aa9.9□□□□□ -0.82
ERCC4-201ENST00000311895 SHTN1A0MZ66 631 aa9.9□□□□□ -0.82
ERCC4-201ENST00000311895 JARID2Q92833 1246 aaPredicted RBP9.9□□□□□ -0.82
ERCC4-201ENST00000311895 PRDM11Q9NQV5 511 aa9.9□□□□□ -0.82
ERCC4-201ENST00000311895 MPRIPQ6WCQ1 1025 aa9.9□□□□□ -0.82
ERCC4-201ENST00000311895 GOLGA8BA8MQT2 603 aa9.9□□□□□ -0.83
ERCC4-201ENST00000311895 GIMAP6Q6P9H5 292 aa9.9□□□□□ -0.83
ERCC4-201ENST00000311895 NME9Q86XW9 330 aa9.9□□□□□ -0.83
ERCC4-201ENST00000311895 MKNK2Q9HBH9 465 aa9.9□□□□□ -0.83
ERCC4-201ENST00000311895 HSP90AA4PQ58FG1 418 aa9.9□□□□□ -0.83
ERCC4-201ENST00000311895 EMILIN1Q9Y6C2 1016 aa9.9□□□□□ -0.83
ERCC4-201ENST00000311895 LUZP1Q86V48 1076 aa9.89□□□□□ -0.83
ERCC4-201ENST00000311895 BAG4O95429 457 aaKnown RBP9.89□□□□□ -0.83
ERCC4-201ENST00000311895 HAND2P61296 217 aa9.89□□□□□ -0.83
ERCC4-201ENST00000311895 FKBP15Q5T1M5 1219 aa9.89□□□□□ -0.83
ERCC4-201ENST00000311895 CTNNBL1Q8WYA6 563 aaPredicted RBP9.89□□□□□ -0.83
ERCC4-201ENST00000311895 SEC63Q9UGP8 760 aaKnown RBP9.89□□□□□ -0.83
ERCC4-201ENST00000311895 ZNF213O14771 459 aa9.89□□□□□ -0.83
ERCC4-201ENST00000311895 IFFO1Q0D2I5 559 aa9.89□□□□□ -0.83
ERCC4-201ENST00000311895 TDRD12Q587J7 1177 aaKnown RBP9.89□□□□□ -0.83
ERCC4-201ENST00000311895 SLC12A7Q9Y666 1083 aa9.89□□□□□ -0.83
ERCC4-201ENST00000311895 MACROD2A1Z1Q3 448 aa9.89□□□□□ -0.83
ERCC4-201ENST00000311895 DAPK1P53355 1430 aa9.89□□□□□ -0.83
ERCC4-201ENST00000311895 SYNJ2O15056 1496 aa9.89□□□□□ -0.83
ERCC4-201ENST00000311895 EZRP15311 586 aaKnown RBP9.89□□□□□ -0.83
ERCC4-201ENST00000311895 USP8P40818 1118 aa9.89□□□□□ -0.83
ERCC4-201ENST00000311895 ZSCAN23Q3MJ62 389 aa9.89□□□□□ -0.83
ERCC4-201ENST00000311895 STX6O43752 255 aa9.88□□□□□ -0.83
ERCC4-201ENST00000311895 LIG1P18858 919 aa9.88□□□□□ -0.83
ERCC4-201ENST00000311895 UBE4AQ14139 1066 aa9.88□□□□□ -0.83
ERCC4-201ENST00000311895 RBM25P49756 843 aaKnown RBP9.88□□□□□ -0.83
ERCC4-201ENST00000311895 GIMAP7Q8NHV1 300 aa9.88□□□□□ -0.83
ERCC4-201ENST00000311895 SH2B1Q9NRF2 756 aaPredicted RBP9.88□□□□□ -0.83
ERCC4-201ENST00000311895 NEBLO76041 1014 aa9.88□□□□□ -0.83
ERCC4-201ENST00000311895 HCLS1P14317 486 aaPredicted RBP9.88□□□□□ -0.83
ERCC4-201ENST00000311895 SSRP1Q08945 709 aaKnown RBP9.88□□□□□ -0.83
ERCC4-201ENST00000311895 SNRKQ9NRH2 765 aa9.88□□□□□ -0.83
ERCC4-201ENST00000311895 FAM83GA6ND36 823 aa9.88□□□□□ -0.83
ERCC4-201ENST00000311895 IFIT3O14879 490 aaKnown RBP9.88□□□□□ -0.83
ERCC4-201ENST00000311895 SPTY2D1Q68D10 685 aaPredicted RBP9.88□□□□□ -0.83
ERCC4-201ENST00000311895 NECAB1Q8N987 351 aa9.88□□□□□ -0.83
ERCC4-201ENST00000311895 GBP3Q9H0R5 595 aa9.88□□□□□ -0.83
ERCC4-201ENST00000311895 EHBP1L1Q8N3D4 1523 aa9.88□□□□□ -0.83
ERCC4-201ENST00000311895 RNF216Q9NWF9 866 aaPredicted RBP9.87□□□□□ -0.83
ERCC4-201ENST00000311895 ALDH1L2Q3SY69 923 aa9.87□□□□□ -0.83
ERCC4-201ENST00000311895 SRRTQ9BXP5 876 aaKnown RBP9.87□□□□□ -0.83
ERCC4-201ENST00000311895 GSTTP1A0A1W2PQM5 241 aa9.87□□□□□ -0.83
ERCC4-201ENST00000311895 GOLGA8AA7E2F4 631 aa9.87□□□□□ -0.83
ERCC4-201ENST00000311895 KIF2AO00139 706 aaPredicted RBP9.87□□□□□ -0.83
ERCC4-201ENST00000311895 GOLIM4O00461 696 aa9.87□□□□□ -0.83
ERCC4-201ENST00000311895 NLRP5P59047 1200 aa9.87□□□□□ -0.83
ERCC4-201ENST00000311895 FBLN1P23142 703 aa9.87□□□□□ -0.83
ERCC4-201ENST00000311895 MAP9Q49MG5 647 aa9.87□□□□□ -0.83
ERCC4-201ENST00000311895 GPATCH11Q8N954 259 aa9.87□□□□□ -0.83
ERCC4-201ENST00000311895 IPO4Q8TEX9 1081 aaKnown RBP9.87□□□□□ -0.83
ERCC4-201ENST00000311895 AKAP2Q9Y2D5 859 aa9.87□□□□□ -0.83
ERCC4-201ENST00000311895 HLTFQ14527 1009 aaKnown RBP eCLIP9.87□□□□□ -0.83
ERCC4-201ENST00000311895 TSG101Q99816 390 aa9.87□□□□□ -0.83
ERCC4-201ENST00000311895 SNW1Q13573 536 aaKnown RBP9.87□□□□□ -0.83
ERCC4-201ENST00000311895 LARP1Q6PKG0 1096 aaKnown RBP9.87□□□□□ -0.83
ERCC4-201ENST00000311895 ATAD2Q6PL18 1390 aa9.86□□□□□ -0.83
ERCC4-201ENST00000311895 LMAN1P49257 510 aa9.86□□□□□ -0.83
ERCC4-201ENST00000311895 CEP135Q66GS9 1140 aa9.86□□□□□ -0.83
ERCC4-201ENST00000311895 LRRC2Q9BYS8 371 aa9.86□□□□□ -0.83
ERCC4-201ENST00000311895 VAT1LQ9HCJ6 419 aa9.86□□□□□ -0.83
ERCC4-201ENST00000311895 NCAPD3P42695 1498 aa9.86□□□□□ -0.83
ERCC4-201ENST00000311895 LRPPRCP42704 1394 aaKnown RBP9.86□□□□□ -0.83
ERCC4-201ENST00000311895 GPTP24298 496 aa9.86□□□□□ -0.83
ERCC4-201ENST00000311895 ZNF165P49910 485 aa9.86□□□□□ -0.83
ERCC4-201ENST00000311895 PIP4K2BP78356 416 aa9.86□□□□□ -0.83
ERCC4-201ENST00000311895 FAM107BQ9H098 131 aa9.86□□□□□ -0.83
ERCC4-201ENST00000311895 ANKIB1Q9P2G1 1089 aa9.86□□□□□ -0.83
ERCC4-201ENST00000311895 STARD3NLO95772 234 aa9.86□□□□□ -0.83
ERCC4-201ENST00000311895 PRPF4BQ13523 1007 aaKnown RBP9.86□□□□□ -0.83
ERCC4-201ENST00000311895 TCEANC2Q96MN5 208 aa9.86□□□□□ -0.83
ERCC4-201ENST00000311895 STX1AQ16623 288 aa9.86□□□□□ -0.83
ERCC4-201ENST00000311895 THEMISQ8N1K5 641 aaPredicted RBP9.86□□□□□ -0.83
ERCC4-201ENST00000311895 TMCO5BA8MYB1 307 aa9.86□□□□□ -0.83
ERCC4-201ENST00000311895 PPP1R12BO60237 982 aaPredicted RBP9.86□□□□□ -0.83
ERCC4-201ENST00000311895 CCDC96Q2M329 555 aa9.86□□□□□ -0.83
ERCC4-201ENST00000311895 DNAAF4Q8WXU2 420 aa9.86□□□□□ -0.83
ERCC4-201ENST00000311895 MAP3K2Q9Y2U5 619 aa9.86□□□□□ -0.83
ERCC4-201ENST00000311895 NAIPQ13075 1403 aa9.86□□□□□ -0.83
ERCC4-201ENST00000311895 ATP5J2-PTCD1G3V325 749 aa9.85□□□□□ -0.83
ERCC4-201ENST00000311895 MTIF2P46199 727 aaKnown RBP9.85□□□□□ -0.83
ERCC4-201ENST00000311895 CAVIN4Q5BKX8 364 aa9.85□□□□□ -0.83
ERCC4-201ENST00000311895 SPECC1Q5M775 1068 aa9.85□□□□□ -0.83
ERCC4-201ENST00000311895 SUPT6HQ7KZ85 1726 aaKnown RBP9.85□□□□□ -0.83
ERCC4-201ENST00000311895 CTCFLQ8NI51 663 aaPredicted RBP9.85□□□□□ -0.83
ERCC4-201ENST00000311895 CNPY2Q9Y2B0 182 aa9.85□□□□□ -0.83
ERCC4-201ENST00000311895 CCDC61Q9Y6R9 512 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms