RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 NRAPQ86VF7 1730 aa29.5■■■□□ 2.31
SNCB-201ENST00000310112 DDX54Q8TDD1 881 aaKnown RBP29.5■■■□□ 2.31
SNCB-201ENST00000310112 LRP6O75581 1613 aa29.5■■■□□ 2.31
SNCB-201ENST00000310112 PI4KAP2A4QPH2 592 aa29.49■■■□□ 2.31
SNCB-201ENST00000310112 PI4KAP1Q8N8J0 262 aa29.49■■■□□ 2.31
SNCB-201ENST00000310112 ADCY9O60503 1353 aa29.48■■■□□ 2.31
SNCB-201ENST00000310112 UBAP1LF5GYI3 381 aa29.48■■■□□ 2.31
SNCB-201ENST00000310112 PIP4K2BP78356 416 aa29.48■■■□□ 2.31
SNCB-201ENST00000310112 BEND3Q5T5X7 828 aa29.48■■■□□ 2.31
SNCB-201ENST00000310112 ANKRD45Q5TZF3 282 aa29.48■■■□□ 2.31
SNCB-201ENST00000310112 ZBTB47Q9UFB7 747 aaPredicted RBP29.48■■■□□ 2.31
SNCB-201ENST00000310112 PDIA6Q15084 440 aa29.47■■■□□ 2.31
SNCB-201ENST00000310112 USP44Q9H0E7 712 aa29.47■■■□□ 2.31
SNCB-201ENST00000310112 TNS2Q63HR2 1409 aa29.46■■■□□ 2.31
SNCB-201ENST00000310112 UBTFL1P0CB47 393 aaPredicted RBP29.46■■■□□ 2.31
SNCB-201ENST00000310112 PRAMEF22A3QJZ6 481 aa29.45■■■□□ 2.31
SNCB-201ENST00000310112 USP35Q9P2H5 1018 aa29.45■■■□□ 2.31
SNCB-201ENST00000310112 GLI3P10071 1580 aa29.45■■■□□ 2.3
SNCB-201ENST00000310112 ATP8B2P98198 1209 aa29.44■■■□□ 2.3
SNCB-201ENST00000310112 EXOC5O00471 708 aa29.43■■■□□ 2.3
SNCB-201ENST00000310112 PROSER3Q2NL68 480 aa29.43■■■□□ 2.3
SNCB-201ENST00000310112 LNPKQ9C0E8 428 aa29.43■■■□□ 2.3
SNCB-201ENST00000310112 TMOD3Q9NYL9 352 aa29.43■■■□□ 2.3
SNCB-201ENST00000310112 JCADQ9P266 1359 aa29.42■■■□□ 2.3
SNCB-201ENST00000310112 ANXA1P04083 346 aa29.42■■■□□ 2.3
SNCB-201ENST00000310112 MAP3K2Q9Y2U5 619 aa29.42■■■□□ 2.3
SNCB-201ENST00000310112 SLIT2O94813 1529 aa29.42■■■□□ 2.3
SNCB-201ENST00000310112 KCPQ6ZWJ8 1503 aa29.42■■■□□ 2.3
SNCB-201ENST00000310112 TOGARAM1Q9Y4F4 1720 aa29.42■■■□□ 2.3
SNCB-201ENST00000310112 LINS1Q8NG48 757 aa29.41■■■□□ 2.3
SNCB-201ENST00000310112 SPATA31A1Q5TZJ5 1347 aa29.41■■■□□ 2.3
SNCB-201ENST00000310112 ADAMTS2O95450 1211 aa29.4■■■□□ 2.3
SNCB-201ENST00000310112 TEX13AQ9BXU3 409 aaPredicted RBP29.39■■■□□ 2.3
SNCB-201ENST00000310112 USP16Q9Y5T5 823 aa29.39■■■□□ 2.3
SNCB-201ENST00000310112 VSIG10Q8N0Z9 540 aa29.38■■■□□ 2.29
SNCB-201ENST00000310112 NEXNQ0ZGT2 675 aa29.37■■■□□ 2.29
SNCB-201ENST00000310112 LRP10Q7Z4F1 713 aa29.37■■■□□ 2.29
SNCB-201ENST00000310112 LRRFIP2Q9Y608 721 aaKnown RBP29.37■■■□□ 2.29
SNCB-201ENST00000310112 BMP2KLQ5H9B9 411 aa29.36■■■□□ 2.29
SNCB-201ENST00000310112 BARGINQ6ZT62 677 aa29.36■■■□□ 2.29
SNCB-201ENST00000310112 RIC3Q7Z5B4 369 aa29.36■■■□□ 2.29
SNCB-201ENST00000310112 SPATA31A5Q5VU36 1347 aa29.36■■■□□ 2.29
SNCB-201ENST00000310112 SPATA31A7Q8IWB4 1347 aa29.36■■■□□ 2.29
SNCB-201ENST00000310112 NUTM2BA6NNL0 878 aaPredicted RBP29.35■■■□□ 2.29
SNCB-201ENST00000310112 NUTM2EB1AL46 878 aaPredicted RBP29.35■■■□□ 2.29
SNCB-201ENST00000310112 NUTM2AQ8IVF1 878 aaPredicted RBP29.35■■■□□ 2.29
SNCB-201ENST00000310112 XAGE3Q8WTP9 111 aa29.35■■■□□ 2.29
SNCB-201ENST00000310112 UTYO14607 1347 aa29.35■■■□□ 2.29
SNCB-201ENST00000310112 COPS6Q7L5N1 327 aa29.34■■■□□ 2.29
SNCB-201ENST00000310112 SSH3Q8TE77 659 aa29.34■■■□□ 2.29
SNCB-201ENST00000310112 ANKRD13DQ6ZTN6 518 aa29.33■■■□□ 2.29
SNCB-201ENST00000310112 METTL22Q9BUU2 404 aaPredicted RBP29.33■■■□□ 2.29
SNCB-201ENST00000310112 ITGB4P16144 1822 aa29.33■■■□□ 2.29
SNCB-201ENST00000310112 MYL6BP14649 208 aa29.32■■■□□ 2.28
SNCB-201ENST00000310112 SPATA31A6Q5VVP1 1343 aa29.32■■■□□ 2.28
SNCB-201ENST00000310112 C9orf78Q9NZ63 289 aaPredicted RBP29.32■■■□□ 2.28
SNCB-201ENST00000310112 BCL9O00512 1426 aa29.31■■■□□ 2.28
SNCB-201ENST00000310112 EIF5BO60841 1220 aaKnown RBP29.31■■■□□ 2.28
SNCB-201ENST00000310112 AIMP1Q12904 312 aaKnown RBP29.31■■■□□ 2.28
SNCB-201ENST00000310112 MTX1Q13505 466 aa29.31■■■□□ 2.28
SNCB-201ENST00000310112 IPO9Q96P70 1041 aaKnown RBP29.31■■■□□ 2.28
SNCB-201ENST00000310112 POLA2Q14181 598 aa29.3■■■□□ 2.28
SNCB-201ENST00000310112 DDRGK1Q96HY6 314 aa29.3■■■□□ 2.28
SNCB-201ENST00000310112 UPF2Q9HAU5 1272 aaKnown RBP29.3■■■□□ 2.28
SNCB-201ENST00000310112 RAB11FIP3O75154 756 aa29.29■■■□□ 2.28
SNCB-201ENST00000310112 DDB1Q16531 1140 aa29.29■■■□□ 2.28
SNCB-201ENST00000310112 AEBP2Q6ZN18 517 aaPredicted RBP29.29■■■□□ 2.28
SNCB-201ENST00000310112 PLBD2Q8NHP8 589 aa29.29■■■□□ 2.28
SNCB-201ENST00000310112 CERKQ8TCT0 537 aa29.29■■■□□ 2.28
SNCB-201ENST00000310112 PIGBQ92521 554 aa29.29■■■□□ 2.28
SNCB-201ENST00000310112 NBPF7P0C2Y1 421 aaPredicted RBP29.28■■■□□ 2.28
SNCB-201ENST00000310112 HSP90AB4PQ58FF6 505 aa29.28■■■□□ 2.28
SNCB-201ENST00000310112 UNC5CLQ8IV45 518 aa29.28■■■□□ 2.28
SNCB-201ENST00000310112 PNMA6EA0A0J9YXQ4 647 aa29.27■■■□□ 2.28
SNCB-201ENST00000310112 GRM8O00222 908 aa29.27■■■□□ 2.28
SNCB-201ENST00000310112 PLEKHM2Q8IWE5 1019 aa29.27■■■□□ 2.28
SNCB-201ENST00000310112 PTCD1O75127 700 aaKnown RBP29.26■■■□□ 2.27
SNCB-201ENST00000310112 PPP1R42Q7Z4L9 355 aa29.26■■■□□ 2.27
SNCB-201ENST00000310112 NPM2Q86SE8 214 aaKnown RBP29.26■■■□□ 2.27
SNCB-201ENST00000310112 LRRCC1Q9C099 1032 aa29.26■■■□□ 2.27
SNCB-201ENST00000310112 ATG3Q9NT62 314 aa29.26■■■□□ 2.27
SNCB-201ENST00000310112 COL15A1P39059 1388 aa29.24■■■□□ 2.27
SNCB-201ENST00000310112 ARFGEF2Q9Y6D5 1785 aa29.24■■■□□ 2.27
SNCB-201ENST00000310112 NEURL1BA8MQ27 555 aa29.24■■■□□ 2.27
SNCB-201ENST00000310112 VPS72Q15906 364 aa29.24■■■□□ 2.27
SNCB-201ENST00000310112 NBPF26B4DH59 902 aa29.23■■■□□ 2.27
SNCB-201ENST00000310112 STARD3NLO95772 234 aa29.23■■■□□ 2.27
SNCB-201ENST00000310112 IGKV5-2P06315 115 aa29.23■■■□□ 2.27
SNCB-201ENST00000310112 CWF19L2Q2TBE0 894 aaKnown RBP29.23■■■□□ 2.27
SNCB-201ENST00000310112 NBPF14Q5TI25 921 aa29.23■■■□□ 2.27
SNCB-201ENST00000310112 NBPF10Q6P3W6 841 aaKnown RBP29.23■■■□□ 2.27
SNCB-201ENST00000310112 NBPF15Q8N660 670 aa29.23■■■□□ 2.27
SNCB-201ENST00000310112 OSBPL3Q9H4L5 887 aa29.23■■■□□ 2.27
SNCB-201ENST00000310112 GCKRQ14397 625 aa29.22■■■□□ 2.27
SNCB-201ENST00000310112 FNBP4Q8N3X1 1017 aaPredicted RBP29.22■■■□□ 2.27
SNCB-201ENST00000310112 MYD88Q99836 296 aa29.22■■■□□ 2.27
SNCB-201ENST00000310112 ASAP1Q9ULH1 1129 aa29.22■■■□□ 2.27
SNCB-201ENST00000310112 SRGAP3O43295 1099 aa29.21■■■□□ 2.27
SNCB-201ENST00000310112 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.2■■■□□ 2.27
SNCB-201ENST00000310112 TTC22Q5TAA0 569 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms