RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 USPL1Q5W0Q7 1092 aa22.61■■□□□ 1.21
HMGCLL1-202ENST00000308161 FMNL2Q96PY5 1086 aa22.61■■□□□ 1.21
HMGCLL1-202ENST00000308161 ZNF330Q9Y3S2 320 aaPredicted RBP22.61■■□□□ 1.21
HMGCLL1-202ENST00000308161 COL15A1P39059 1388 aa22.61■■□□□ 1.21
HMGCLL1-202ENST00000308161 GRIN3BO60391 1043 aa22.6■■□□□ 1.21
HMGCLL1-202ENST00000308161 CHD4Q14839 1912 aa22.6■■□□□ 1.21
HMGCLL1-202ENST00000308161 MAPK8IP3Q9UPT6 1336 aa22.59■■□□□ 1.21
HMGCLL1-202ENST00000308161 TEX13AQ9BXU3 409 aaPredicted RBP22.57■■□□□ 1.2
HMGCLL1-202ENST00000308161 C10orf71Q711Q0 1435 aa22.57■■□□□ 1.2
HMGCLL1-202ENST00000308161 MYBBP1AQ9BQG0 1328 aaKnown RBP22.57■■□□□ 1.2
HMGCLL1-202ENST00000308161 HTATSF1O43719 755 aaKnown RBP22.57■■□□□ 1.2
HMGCLL1-202ENST00000308161 DDR1Q08345 913 aa22.57■■□□□ 1.2
HMGCLL1-202ENST00000308161 NARFQ9UHQ1 456 aa22.57■■□□□ 1.2
HMGCLL1-202ENST00000308161 A0A0G2JLW4 131 aa22.56■■□□□ 1.2
HMGCLL1-202ENST00000308161 ZNF784Q8NCA9 323 aaPredicted RBP22.56■■□□□ 1.2
HMGCLL1-202ENST00000308161 PLEKHF1Q96S99 279 aa22.56■■□□□ 1.2
HMGCLL1-202ENST00000308161 PNNQ9H307 717 aaKnown RBP22.56■■□□□ 1.2
HMGCLL1-202ENST00000308161 PXDNLA1KZ92 1463 aa22.55■■□□□ 1.2
HMGCLL1-202ENST00000308161 NFE2L2Q16236 605 aa22.55■■□□□ 1.2
HMGCLL1-202ENST00000308161 MIS18AQ9NYP9 233 aa22.55■■□□□ 1.2
HMGCLL1-202ENST00000308161 A1BGP04217 495 aa22.54■■□□□ 1.2
HMGCLL1-202ENST00000308161 NPM2Q86SE8 214 aaKnown RBP22.54■■□□□ 1.2
HMGCLL1-202ENST00000308161 PRAMEF22A3QJZ6 481 aa22.53■■□□□ 1.2
HMGCLL1-202ENST00000308161 EIF5P55010 431 aaKnown RBP22.53■■□□□ 1.2
HMGCLL1-202ENST00000308161 TGFB2P61812 414 aa22.53■■□□□ 1.2
HMGCLL1-202ENST00000308161 TAF7Q15545 349 aaPredicted RBP22.53■■□□□ 1.2
HMGCLL1-202ENST00000308161 THUMPD2Q9BTF0 503 aaKnown RBP22.53■■□□□ 1.2
HMGCLL1-202ENST00000308161 N4BP2Q86UW6 1770 aaPredicted RBP22.53■■□□□ 1.2
HMGCLL1-202ENST00000308161 DLG5Q8TDM6 1919 aa22.52■■□□□ 1.2
HMGCLL1-202ENST00000308161 A0A087WZG4 1122 aa22.52■■□□□ 1.2
HMGCLL1-202ENST00000308161 POLRMTO00411 1230 aaKnown RBP22.52■■□□□ 1.2
HMGCLL1-202ENST00000308161 DPEP1P16444 411 aa22.52■■□□□ 1.2
HMGCLL1-202ENST00000308161 ZEB1P37275 1124 aaPredicted RBP22.52■■□□□ 1.2
HMGCLL1-202ENST00000308161 PIP4K2AP48426 406 aaPredicted RBP22.52■■□□□ 1.2
HMGCLL1-202ENST00000308161 BICDL1Q6ZP65 573 aa22.52■■□□□ 1.2
HMGCLL1-202ENST00000308161 TBC1D2BQ9UPU7 963 aa22.52■■□□□ 1.2
HMGCLL1-202ENST00000308161 BCS1LQ9Y276 419 aa22.52■■□□□ 1.2
HMGCLL1-202ENST00000308161 USP16Q9Y5T5 823 aa22.52■■□□□ 1.2
HMGCLL1-202ENST00000308161 KIF13BQ9NQT8 1826 aa22.51■■□□□ 1.19
HMGCLL1-202ENST00000308161 TM4SF1P30408 202 aa22.51■■□□□ 1.19
HMGCLL1-202ENST00000308161 NFIXQ14938 502 aa22.51■■□□□ 1.19
HMGCLL1-202ENST00000308161 BCL2L12Q9HB09 334 aa22.51■■□□□ 1.19
HMGCLL1-202ENST00000308161 SNRPA1P09661 255 aaKnown RBP22.5■■□□□ 1.19
HMGCLL1-202ENST00000308161 IL6STP40189 918 aaPredicted RBP22.5■■□□□ 1.19
HMGCLL1-202ENST00000308161 KIAA1551Q9HCM1 1747 aa22.49■■□□□ 1.19
HMGCLL1-202ENST00000308161 WDR43Q15061 677 aaKnown RBP eCLIP22.49■■□□□ 1.19
HMGCLL1-202ENST00000308161 CCDC146Q8IYE0 955 aa22.49■■□□□ 1.19
HMGCLL1-202ENST00000308161 SERPINB2P05120 415 aa22.46■■□□□ 1.19
HMGCLL1-202ENST00000308161 CHRNA5P30532 468 aa22.46■■□□□ 1.19
HMGCLL1-202ENST00000308161 RIPK4P57078 832 aa22.46■■□□□ 1.19
HMGCLL1-202ENST00000308161 PNISRQ8TF01 805 aaKnown RBP22.46■■□□□ 1.19
HMGCLL1-202ENST00000308161 PRKRIP1Q9H875 184 aaPredicted RBP22.46■■□□□ 1.19
HMGCLL1-202ENST00000308161 RRP7AQ9Y3A4 280 aaKnown RBP22.46■■□□□ 1.19
HMGCLL1-202ENST00000308161 NEUROD2Q15784 382 aa22.44■■□□□ 1.18
HMGCLL1-202ENST00000308161 TBC1D9BQ66K14 1250 aa22.44■■□□□ 1.18
HMGCLL1-202ENST00000308161 DZIP3Q86Y13 1208 aaKnown RBP22.44■■□□□ 1.18
HMGCLL1-202ENST00000308161 PIM2Q9P1W9 311 aa22.43■■□□□ 1.18
HMGCLL1-202ENST00000308161 SCN7AQ01118 1682 aa22.43■■□□□ 1.18
HMGCLL1-202ENST00000308161 KCNA3P22001 575 aa22.42■■□□□ 1.18
HMGCLL1-202ENST00000308161 TMPOP42166 694 aaKnown RBP22.42■■□□□ 1.18
HMGCLL1-202ENST00000308161 ARHGAP27Q6ZUM4 889 aa22.42■■□□□ 1.18
HMGCLL1-202ENST00000308161 AFDNP55196 1824 aaKnown RBP22.42■■□□□ 1.18
HMGCLL1-202ENST00000308161 CAMTA2O94983 1202 aa22.41■■□□□ 1.18
HMGCLL1-202ENST00000308161 KDM3BQ7LBC6 1761 aa22.41■■□□□ 1.18
HMGCLL1-202ENST00000308161 NBPF26B4DH59 902 aa22.4■■□□□ 1.18
HMGCLL1-202ENST00000308161 NPHP1O15259 732 aa22.4■■□□□ 1.18
HMGCLL1-202ENST00000308161 DALRD3Q5D0E6 543 aaKnown RBP22.4■■□□□ 1.18
HMGCLL1-202ENST00000308161 NBPF10Q6P3W6 841 aaKnown RBP22.4■■□□□ 1.18
HMGCLL1-202ENST00000308161 CCDC24Q8N4L8 307 aa22.4■■□□□ 1.18
HMGCLL1-202ENST00000308161 NBPF15Q8N660 670 aa22.4■■□□□ 1.18
HMGCLL1-202ENST00000308161 TSPYL4Q9UJ04 414 aa22.4■■□□□ 1.18
HMGCLL1-202ENST00000308161 CARMIL3Q8ND23 1372 aa22.4■■□□□ 1.18
HMGCLL1-202ENST00000308161 ATP10DQ9P241 1426 aa22.39■■□□□ 1.18
HMGCLL1-202ENST00000308161 EIF4A1P60842 406 aaKnown RBP22.39■■□□□ 1.18
HMGCLL1-202ENST00000308161 LMOD3Q0VAK6 560 aa22.39■■□□□ 1.18
HMGCLL1-202ENST00000308161 NGEFQ8N5V2 710 aa22.39■■□□□ 1.18
HMGCLL1-202ENST00000308161 ZNF526Q8TF50 670 aaPredicted RBP22.39■■□□□ 1.18
HMGCLL1-202ENST00000308161 ADAMTS8Q9UP79 889 aa22.39■■□□□ 1.18
HMGCLL1-202ENST00000308161 RUNDC1Q96C34 613 aa22.38■■□□□ 1.17
HMGCLL1-202ENST00000308161 SETDB2Q96T68 719 aa22.38■■□□□ 1.17
HMGCLL1-202ENST00000308161 BRCA1P38398 1863 aaKnown RBP22.38■■□□□ 1.17
HMGCLL1-202ENST00000308161 NRXN2Q9P2S2 1712 aa22.38■■□□□ 1.17
HMGCLL1-202ENST00000308161 GIGYF1O75420 1035 aaPredicted RBP22.37■■□□□ 1.17
HMGCLL1-202ENST00000308161 LAMB4A4D0S4 1761 aa22.37■■□□□ 1.17
HMGCLL1-202ENST00000308161 C2CD5Q86YS7 1000 aa22.36■■□□□ 1.17
HMGCLL1-202ENST00000308161 BCORQ6W2J9 1755 aa22.35■■□□□ 1.17
HMGCLL1-202ENST00000308161 PRR5LQ6MZQ0 368 aa22.35■■□□□ 1.17
HMGCLL1-202ENST00000308161 ZNF652Q9Y2D9 606 aa22.35■■□□□ 1.17
HMGCLL1-202ENST00000308161 H0YIN7 160 aa22.34■■□□□ 1.17
HMGCLL1-202ENST00000308161 MYL6BP14649 208 aa22.34■■□□□ 1.17
HMGCLL1-202ENST00000308161 CNBD1Q8NA66 436 aa22.34■■□□□ 1.17
HMGCLL1-202ENST00000308161 LAS1LQ9Y4W2 734 aaKnown RBP22.34■■□□□ 1.17
HMGCLL1-202ENST00000308161 ADCY9O60503 1353 aa22.32■■□□□ 1.16
HMGCLL1-202ENST00000308161 FAM177BA6PVY3 158 aa22.32■■□□□ 1.16
HMGCLL1-202ENST00000308161 GPBP1L1Q9HC44 474 aaPredicted RBP22.32■■□□□ 1.16
HMGCLL1-202ENST00000308161 ZNF316A6NFI3 1004 aaPredicted RBP22.31■■□□□ 1.16
HMGCLL1-202ENST00000308161 EIF2S2P20042 333 aaKnown RBP22.31■■□□□ 1.16
HMGCLL1-202ENST00000308161 ST5P78524 1137 aa22.31■■□□□ 1.16
HMGCLL1-202ENST00000308161 CLEC4GQ6UXB4 293 aa22.31■■□□□ 1.16
HMGCLL1-202ENST00000308161 NBPF5PQ86XG9 351 aaPredicted RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms