RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 CHMP4AQ9BY43 222 aa20.42■□□□□ 0.86
TVP23B-201ENST00000307767 SLC52A2Q9HAB3 445 aa20.42■□□□□ 0.86
TVP23B-201ENST00000307767 CYP27B1O15528 508 aa20.41■□□□□ 0.86
TVP23B-201ENST00000307767 TATP17735 454 aaPredicted RBP20.41■□□□□ 0.86
TVP23B-201ENST00000307767 SLC39A6Q13433 755 aa20.41■□□□□ 0.86
TVP23B-201ENST00000307767 PPP1R42Q7Z4L9 355 aa20.41■□□□□ 0.86
TVP23B-201ENST00000307767 USP26Q9BXU7 913 aa20.41■□□□□ 0.86
TVP23B-201ENST00000307767 TSHZ3Q63HK5 1081 aa20.41■□□□□ 0.86
TVP23B-201ENST00000307767 SCN11AQ9UI33 1791 aa20.4■□□□□ 0.86
TVP23B-201ENST00000307767 ZNF790Q6PG37 636 aa20.4■□□□□ 0.86
TVP23B-201ENST00000307767 STAP2Q9UGK3 403 aa20.39■□□□□ 0.86
TVP23B-201ENST00000307767 PLEKHG2Q9H7P9 1386 aa20.39■□□□□ 0.85
TVP23B-201ENST00000307767 NFATC2IPQ8NCF5 419 aa20.39■□□□□ 0.85
TVP23B-201ENST00000307767 MAP3K2Q9Y2U5 619 aa20.39■□□□□ 0.85
TVP23B-201ENST00000307767 TUBGCP6Q96RT7 1819 aa20.38■□□□□ 0.85
TVP23B-201ENST00000307767 KSR2Q6VAB6 950 aa20.38■□□□□ 0.85
TVP23B-201ENST00000307767 SPG7Q9UQ90 795 aa20.38■□□□□ 0.85
TVP23B-201ENST00000307767 SOS2Q07890 1332 aaPredicted RBP20.38■□□□□ 0.85
TVP23B-201ENST00000307767 ZNF335Q9H4Z2 1342 aaPredicted RBP20.38■□□□□ 0.85
TVP23B-201ENST00000307767 MRC1P22897 1456 aa20.38■□□□□ 0.85
TVP23B-201ENST00000307767 HSCBQ8IWL3 235 aa20.38■□□□□ 0.85
TVP23B-201ENST00000307767 CSB-PGBD3P0DP91 1061 aa20.37■□□□□ 0.85
TVP23B-201ENST00000307767 IFNL2Q8IZJ0 200 aa20.37■□□□□ 0.85
TVP23B-201ENST00000307767 DDX21Q9NR30 783 aaKnown RBP eCLIP20.37■□□□□ 0.85
TVP23B-201ENST00000307767 MX1P20591 662 aa20.36■□□□□ 0.85
TVP23B-201ENST00000307767 PKD1L3Q7Z443 1732 aa20.36■□□□□ 0.85
TVP23B-201ENST00000307767 MTX1Q13505 466 aa20.36■□□□□ 0.85
TVP23B-201ENST00000307767 LRP10Q7Z4F1 713 aa20.36■□□□□ 0.85
TVP23B-201ENST00000307767 HYPKQ9NX55 129 aa20.36■□□□□ 0.85
TVP23B-201ENST00000307767 ALDH1L1O75891 902 aa20.35■□□□□ 0.85
TVP23B-201ENST00000307767 ZNF496Q96IT1 587 aaPredicted RBP20.35■□□□□ 0.85
TVP23B-201ENST00000307767 SLAIN2Q9P270 581 aa20.35■□□□□ 0.85
TVP23B-201ENST00000307767 C5P01031 1676 aa20.35■□□□□ 0.85
TVP23B-201ENST00000307767 SRGAP3O43295 1099 aa20.34■□□□□ 0.85
TVP23B-201ENST00000307767 CWF19L2Q2TBE0 894 aaKnown RBP20.34■□□□□ 0.85
TVP23B-201ENST00000307767 KAZALD1Q96I82 304 aa20.34■□□□□ 0.85
TVP23B-201ENST00000307767 DCAF5Q96JK2 942 aa20.34■□□□□ 0.85
TVP23B-201ENST00000307767 IL1RAPL2Q9NP60 686 aa20.34■□□□□ 0.85
TVP23B-201ENST00000307767 RAB11FIP3O75154 756 aa20.33■□□□□ 0.85
TVP23B-201ENST00000307767 SURF6O75683 361 aaKnown RBP20.33■□□□□ 0.85
TVP23B-201ENST00000307767 UNC5CLQ8IV45 518 aa20.33■□□□□ 0.85
TVP23B-201ENST00000307767 CHMP5Q9NZZ3 219 aa20.33■□□□□ 0.85
TVP23B-201ENST00000307767 RHPN1Q8TCX5 695 aa20.33■□□□□ 0.84
TVP23B-201ENST00000307767 UTYO14607 1347 aa20.32■□□□□ 0.84
TVP23B-201ENST00000307767 GLI3P10071 1580 aa20.32■□□□□ 0.84
TVP23B-201ENST00000307767 IGKV5-2P06315 115 aa20.31■□□□□ 0.84
TVP23B-201ENST00000307767 USP16Q9Y5T5 823 aa20.31■□□□□ 0.84
TVP23B-201ENST00000307767 LINS1Q8NG48 757 aa20.31■□□□□ 0.84
TVP23B-201ENST00000307767 AOX1Q06278 1338 aa20.3■□□□□ 0.84
TVP23B-201ENST00000307767 GSE1Q14687 1217 aa20.3■□□□□ 0.84
TVP23B-201ENST00000307767 NUTM1Q86Y26 1132 aa20.3■□□□□ 0.84
TVP23B-201ENST00000307767 WDR17Q8IZU2 1322 aa20.3■□□□□ 0.84
TVP23B-201ENST00000307767 ERC2O15083 957 aa20.3■□□□□ 0.84
TVP23B-201ENST00000307767 EIF5BO60841 1220 aaKnown RBP20.3■□□□□ 0.84
TVP23B-201ENST00000307767 PI4K2BQ8TCG2 481 aa20.3■□□□□ 0.84
TVP23B-201ENST00000307767 K7ELQ4 463 aaPredicted RBP20.29■□□□□ 0.84
TVP23B-201ENST00000307767 CHMLP26374 656 aa20.29■□□□□ 0.84
TVP23B-201ENST00000307767 AIMP1Q12904 312 aaKnown RBP20.29■□□□□ 0.84
TVP23B-201ENST00000307767 COL5A2P05997 1499 aaPredicted RBP20.28■□□□□ 0.84
TVP23B-201ENST00000307767 RABEP1Q15276 862 aa20.28■□□□□ 0.84
TVP23B-201ENST00000307767 ESYT1Q9BSJ8 1104 aa20.28■□□□□ 0.84
TVP23B-201ENST00000307767 CASC1Q6TDU7 716 aa20.28■□□□□ 0.84
TVP23B-201ENST00000307767 KIF1BPQ96EK5 621 aa20.28■□□□□ 0.84
TVP23B-201ENST00000307767 SUCLG2Q96I99 432 aa20.28■□□□□ 0.84
TVP23B-201ENST00000307767 PRDM11Q9NQV5 511 aa20.28■□□□□ 0.84
TVP23B-201ENST00000307767 XAGE3Q8WTP9 111 aa20.27■□□□□ 0.84
TVP23B-201ENST00000307767 IL25Q9H293 177 aa20.27■□□□□ 0.84
TVP23B-201ENST00000307767 C9orf78Q9NZ63 289 aaPredicted RBP20.27■□□□□ 0.84
TVP23B-201ENST00000307767 GRM8O00222 908 aa20.26■□□□□ 0.83
TVP23B-201ENST00000307767 REC8O95072 547 aa20.26■□□□□ 0.83
TVP23B-201ENST00000307767 SNRPA1P09661 255 aaKnown RBP20.26■□□□□ 0.83
TVP23B-201ENST00000307767 MYL6BP14649 208 aa20.26■□□□□ 0.83
TVP23B-201ENST00000307767 COPS6Q7L5N1 327 aa20.26■□□□□ 0.83
TVP23B-201ENST00000307767 USP42Q9H9J4 1324 aaKnown RBP20.26■□□□□ 0.83
TVP23B-201ENST00000307767 HSP90AB1P08238 724 aaKnown RBP20.25■□□□□ 0.83
TVP23B-201ENST00000307767 MCM4P33991 863 aa20.25■□□□□ 0.83
TVP23B-201ENST00000307767 PIP4K2AP48426 406 aaPredicted RBP20.25■□□□□ 0.83
TVP23B-201ENST00000307767 PARP4Q9UKK3 1724 aaKnown RBP20.25■□□□□ 0.83
TVP23B-201ENST00000307767 DDX58O95786 925 aaKnown RBP20.25■□□□□ 0.83
TVP23B-201ENST00000307767 PA2G4Q9UQ80 394 aaKnown RBP20.25■□□□□ 0.83
TVP23B-201ENST00000307767 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.25■□□□□ 0.83
TVP23B-201ENST00000307767 ABCA3Q99758 1704 aa20.24■□□□□ 0.83
TVP23B-201ENST00000307767 NEURL1BA8MQ27 555 aa20.23■□□□□ 0.83
TVP23B-201ENST00000307767 CABP4P57796 275 aa20.23■□□□□ 0.83
TVP23B-201ENST00000307767 RILPL2Q969X0 211 aa20.23■□□□□ 0.83
TVP23B-201ENST00000307767 FMNL2Q96PY5 1086 aa20.23■□□□□ 0.83
TVP23B-201ENST00000307767 METTL22Q9BUU2 404 aaPredicted RBP20.23■□□□□ 0.83
TVP23B-201ENST00000307767 BICC1Q9H694 974 aaKnown RBP20.23■□□□□ 0.83
TVP23B-201ENST00000307767 LARP1Q6PKG0 1096 aaKnown RBP20.23■□□□□ 0.83
TVP23B-201ENST00000307767 TOM1L2Q6ZVM7 507 aa20.23■□□□□ 0.83
TVP23B-201ENST00000307767 ZCRB1Q8TBF4 217 aaKnown RBP20.23■□□□□ 0.83
TVP23B-201ENST00000307767 CIZ1Q9ULV3 898 aaPredicted RBP20.23■□□□□ 0.83
TVP23B-201ENST00000307767 TRIM6-TRIM34B2RNG4 842 aa20.22■□□□□ 0.83
TVP23B-201ENST00000307767 NKX1-1Q15270 411 aaPredicted RBP20.22■□□□□ 0.83
TVP23B-201ENST00000307767 RIC3Q7Z5B4 369 aa20.22■□□□□ 0.83
TVP23B-201ENST00000307767 GCKRQ14397 625 aa20.22■□□□□ 0.83
TVP23B-201ENST00000307767 HSP90AB4PQ58FF6 505 aa20.22■□□□□ 0.83
TVP23B-201ENST00000307767 EPHA10Q5JZY3 1008 aa20.22■□□□□ 0.83
TVP23B-201ENST00000307767 TTC5Q8N0Z6 440 aa20.22■□□□□ 0.83
TVP23B-201ENST00000307767 CARD10Q9BWT7 1032 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms