RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 SOS1Q07889 1333 aaPredicted RBP17.59■□□□□ 0.41
RAB40A-201ENST00000304236 PLSCR1O15162 318 aa17.59■□□□□ 0.41
RAB40A-201ENST00000304236 SLC4A2P04920 1241 aa17.59■□□□□ 0.41
RAB40A-201ENST00000304236 CEP85Q6P2H3 762 aa17.59■□□□□ 0.41
RAB40A-201ENST00000304236 PLEKHM2Q8IWE5 1019 aa17.59■□□□□ 0.41
RAB40A-201ENST00000304236 RGPD5Q99666 1765 aa17.58■□□□□ 0.41
RAB40A-201ENST00000304236 RTL1A6NKG5 1358 aa17.58■□□□□ 0.41
RAB40A-201ENST00000304236 CCT4P50991 539 aaKnown RBP17.58■□□□□ 0.4
RAB40A-201ENST00000304236 NLRP2Q9NX02 1062 aa17.58■□□□□ 0.4
RAB40A-201ENST00000304236 BCL9O00512 1426 aa17.58■□□□□ 0.4
RAB40A-201ENST00000304236 ERBB3P21860 1342 aa17.57■□□□□ 0.4
RAB40A-201ENST00000304236 RREB1Q92766 1687 aa17.57■□□□□ 0.4
RAB40A-201ENST00000304236 HMMRO75330 724 aa17.57■□□□□ 0.4
RAB40A-201ENST00000304236 BABAM1Q9NWV8 329 aa17.57■□□□□ 0.4
RAB40A-201ENST00000304236 CIZ1Q9ULV3 898 aaPredicted RBP17.57■□□□□ 0.4
RAB40A-201ENST00000304236 MCM4P33991 863 aa17.56■□□□□ 0.4
RAB40A-201ENST00000304236 TTC22Q5TAA0 569 aa17.56■□□□□ 0.4
RAB40A-201ENST00000304236 WNK3Q9BYP7 1800 aa17.56■□□□□ 0.4
RAB40A-201ENST00000304236 SPRYD3Q8NCJ5 442 aa17.55■□□□□ 0.4
RAB40A-201ENST00000304236 ANKRD24Q8TF21 1146 aa17.55■□□□□ 0.4
RAB40A-201ENST00000304236 CACNA1FO60840 1977 aa17.55■□□□□ 0.4
RAB40A-201ENST00000304236 GNAT3A8MTJ3 354 aa17.55■□□□□ 0.4
RAB40A-201ENST00000304236 HOXC9P31274 260 aa17.55■□□□□ 0.4
RAB40A-201ENST00000304236 STK31Q9BXU1 1019 aa17.55■□□□□ 0.4
RAB40A-201ENST00000304236 NUP188Q5SRE5 1749 aa17.55■□□□□ 0.4
RAB40A-201ENST00000304236 HSP90AB1P08238 724 aaKnown RBP17.53■□□□□ 0.4
RAB40A-201ENST00000304236 IL2RBP14784 551 aa17.53■□□□□ 0.4
RAB40A-201ENST00000304236 GSPT1P15170 499 aaKnown RBP17.53■□□□□ 0.4
RAB40A-201ENST00000304236 PTF1AQ7RTS3 328 aa17.53■□□□□ 0.4
RAB40A-201ENST00000304236 MEIS3Q99687 375 aa17.53■□□□□ 0.4
RAB40A-201ENST00000304236 DDIT3P35638 169 aa17.53■□□□□ 0.4
RAB40A-201ENST00000304236 CCDC30Q5VVM6 783 aa17.53■□□□□ 0.4
RAB40A-201ENST00000304236 IP6K1Q92551 441 aa17.53■□□□□ 0.4
RAB40A-201ENST00000304236 KIF2CQ99661 725 aa17.53■□□□□ 0.4
RAB40A-201ENST00000304236 MIS18AQ9NYP9 233 aa17.53■□□□□ 0.4
RAB40A-201ENST00000304236 TNS2Q63HR2 1409 aa17.52■□□□□ 0.4
RAB40A-201ENST00000304236 SBF2Q86WG5 1849 aa17.52■□□□□ 0.4
RAB40A-201ENST00000304236 L1TD1Q5T7N2 865 aaKnown RBP17.52■□□□□ 0.4
RAB40A-201ENST00000304236 CASC1Q6TDU7 716 aa17.51■□□□□ 0.39
RAB40A-201ENST00000304236 LTN1O94822 1766 aa17.51■□□□□ 0.39
RAB40A-201ENST00000304236 DDX11L8A8MPP1 907 aa17.51■□□□□ 0.39
RAB40A-201ENST00000304236 RGPD3A6NKT7 1758 aaPredicted RBP17.51■□□□□ 0.39
RAB40A-201ENST00000304236 RGPD4Q7Z3J3 1758 aa17.51■□□□□ 0.39
RAB40A-201ENST00000304236 MAP3K5Q99683 1374 aa17.5■□□□□ 0.39
RAB40A-201ENST00000304236 K7ELQ4 463 aaPredicted RBP17.49■□□□□ 0.39
RAB40A-201ENST00000304236 GNAI2P04899 355 aa17.49■□□□□ 0.39
RAB40A-201ENST00000304236 G2E3Q7L622 706 aa17.49■□□□□ 0.39
RAB40A-201ENST00000304236 GNAI3P08754 354 aa17.49■□□□□ 0.39
RAB40A-201ENST00000304236 TAF7Q15545 349 aaPredicted RBP17.49■□□□□ 0.39
RAB40A-201ENST00000304236 SPON1Q9HCB6 807 aa17.49■□□□□ 0.39
RAB40A-201ENST00000304236 PTMSP20962 102 aa17.48■□□□□ 0.39
RAB40A-201ENST00000304236 RABEP1Q15276 862 aa17.48■□□□□ 0.39
RAB40A-201ENST00000304236 SLC4A10Q6U841 1118 aa17.48■□□□□ 0.39
RAB40A-201ENST00000304236 C16orf71Q8IYS4 520 aaPredicted RBP17.48■□□□□ 0.39
RAB40A-201ENST00000304236 PROM2Q8N271 834 aa17.48■□□□□ 0.39
RAB40A-201ENST00000304236 IL27Q8NEV9 243 aa17.48■□□□□ 0.39
RAB40A-201ENST00000304236 LTV1Q96GA3 475 aaPredicted RBP17.48■□□□□ 0.39
RAB40A-201ENST00000304236 FAM208AQ9UK61 1670 aaKnown RBP17.48■□□□□ 0.39
RAB40A-201ENST00000304236 KCNQ2O43526 872 aa17.48■□□□□ 0.39
RAB40A-201ENST00000304236 TXNRD1Q16881 649 aa17.48■□□□□ 0.39
RAB40A-201ENST00000304236 OSBPL3Q9H4L5 887 aa17.48■□□□□ 0.39
RAB40A-201ENST00000304236 FLIIQ13045 1269 aa17.47■□□□□ 0.39
RAB40A-201ENST00000304236 CHMP4AQ9BY43 222 aa17.47■□□□□ 0.39
RAB40A-201ENST00000304236 ANO8Q9HCE9 1232 aaPredicted RBP17.47■□□□□ 0.39
RAB40A-201ENST00000304236 ACSBG1Q96GR2 724 aa17.46■□□□□ 0.39
RAB40A-201ENST00000304236 BRPF3Q9ULD4 1205 aa17.46■□□□□ 0.39
RAB40A-201ENST00000304236 PXDNLA1KZ92 1463 aa17.46■□□□□ 0.39
RAB40A-201ENST00000304236 N4BP2Q86UW6 1770 aaPredicted RBP17.46■□□□□ 0.39
RAB40A-201ENST00000304236 F6X3S4 739 aa17.46■□□□□ 0.39
RAB40A-201ENST00000304236 HSP90AA1P07900 732 aaKnown RBP17.46■□□□□ 0.39
RAB40A-201ENST00000304236 IL17REQ8NFR9 667 aa17.46■□□□□ 0.39
RAB40A-201ENST00000304236 GBP4Q96PP9 640 aa17.46■□□□□ 0.39
RAB40A-201ENST00000304236 USP26Q9BXU7 913 aa17.46■□□□□ 0.39
RAB40A-201ENST00000304236 PPP1R1BQ9UD71 204 aaPredicted RBP17.46■□□□□ 0.39
RAB40A-201ENST00000304236 SDSP20132 328 aa17.45■□□□□ 0.38
RAB40A-201ENST00000304236 RAB3GAP1Q15042 981 aa17.45■□□□□ 0.38
RAB40A-201ENST00000304236 STK32BQ9NY57 414 aa17.45■□□□□ 0.38
RAB40A-201ENST00000304236 SMARCA5O60264 1052 aaPredicted RBP17.44■□□□□ 0.38
RAB40A-201ENST00000304236 TRAK2O60296 914 aa17.44■□□□□ 0.38
RAB40A-201ENST00000304236 FKBP5Q13451 457 aaPredicted RBP17.44■□□□□ 0.38
RAB40A-201ENST00000304236 REC8O95072 547 aa17.44■□□□□ 0.38
RAB40A-201ENST00000304236 OTUD7AQ8TE49 926 aaPredicted RBP17.44■□□□□ 0.38
RAB40A-201ENST00000304236 ATP8B2P98198 1209 aa17.43■□□□□ 0.38
RAB40A-201ENST00000304236 DDX54Q8TDD1 881 aaKnown RBP17.42■□□□□ 0.38
RAB40A-201ENST00000304236 TNPO1Q92973 898 aaKnown RBP17.42■□□□□ 0.38
RAB40A-201ENST00000304236 NHSQ6T4R5 1651 aa17.42■□□□□ 0.38
RAB40A-201ENST00000304236 APBB1O00213 710 aa17.41■□□□□ 0.38
RAB40A-201ENST00000304236 PDE1AP54750 535 aa17.41■□□□□ 0.38
RAB40A-201ENST00000304236 SLC15A2Q16348 729 aa17.41■□□□□ 0.38
RAB40A-201ENST00000304236 SKOR2Q2VWA4 1001 aaPredicted RBP17.41■□□□□ 0.38
RAB40A-201ENST00000304236 GOLGA6L3A6NEY3 463 aa17.4■□□□□ 0.38
RAB40A-201ENST00000304236 CD2BP2O95400 341 aaKnown RBP17.4■□□□□ 0.38
RAB40A-201ENST00000304236 HOXB7P09629 217 aa17.4■□□□□ 0.38
RAB40A-201ENST00000304236 RBM42Q9BTD8 480 aaKnown RBP17.4■□□□□ 0.38
RAB40A-201ENST00000304236 LRRCC1Q9C099 1032 aa17.4■□□□□ 0.38
RAB40A-201ENST00000304236 ISY1Q9ULR0 285 aaKnown RBP17.4■□□□□ 0.38
RAB40A-201ENST00000304236 CEMIPQ8WUJ3 1361 aa17.4■□□□□ 0.38
RAB40A-201ENST00000304236 ERC2O15083 957 aa17.4■□□□□ 0.38
RAB40A-201ENST00000304236 FSD2A1L4K1 749 aa17.39■□□□□ 0.37
RAB40A-201ENST00000304236 SRCIN1Q9C0H9 1055 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms