RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 PRPF31Q8WWY3 499 aaKnown RBP16.42■□□□□ 0.22
HIPK3-201ENST00000303296 GRPEL1Q9HAV7 217 aa16.42■□□□□ 0.22
HIPK3-201ENST00000303296 CASTP20810 708 aaKnown RBP16.42■□□□□ 0.22
HIPK3-201ENST00000303296 RFX1P22670 979 aa16.42■□□□□ 0.22
HIPK3-201ENST00000303296 SFPQP23246 707 aaKnown RBP eCLIP16.42■□□□□ 0.22
HIPK3-201ENST00000303296 TAF12Q16514 161 aa16.42■□□□□ 0.22
HIPK3-201ENST00000303296 HDGFL1Q5TGJ6 251 aa16.42■□□□□ 0.22
HIPK3-201ENST00000303296 CEP112Q8N8E3 955 aa16.42■□□□□ 0.22
HIPK3-201ENST00000303296 HAUS7Q99871 368 aa16.42■□□□□ 0.22
HIPK3-201ENST00000303296 MKRN1Q9UHC7 482 aaKnown RBP16.42■□□□□ 0.22
HIPK3-201ENST00000303296 DYNC1I1O14576 645 aa16.42■□□□□ 0.22
HIPK3-201ENST00000303296 ZNF287Q9HBT7 754 aa16.42■□□□□ 0.22
HIPK3-201ENST00000303296 ZSCAN12O43309 604 aa16.42■□□□□ 0.22
HIPK3-201ENST00000303296 BIRC2Q13490 618 aa16.42■□□□□ 0.22
HIPK3-201ENST00000303296 FAM212AQ96EL1 285 aa16.42■□□□□ 0.22
HIPK3-201ENST00000303296 SLC4A2P04920 1241 aa16.41■□□□□ 0.22
HIPK3-201ENST00000303296 ZSWIM4Q9H7M6 989 aa16.41■□□□□ 0.22
HIPK3-201ENST00000303296 KIF3CO14782 793 aa16.41■□□□□ 0.22
HIPK3-201ENST00000303296 MAP3K11Q16584 847 aa16.41■□□□□ 0.22
HIPK3-201ENST00000303296 GEN1Q17RS7 908 aa16.41■□□□□ 0.22
HIPK3-201ENST00000303296 CCDC40Q4G0X9 1142 aa16.41■□□□□ 0.22
HIPK3-201ENST00000303296 ALS2CR12Q96Q35 445 aa16.41■□□□□ 0.22
HIPK3-201ENST00000303296 GSTA5Q7RTV2 222 aa16.41■□□□□ 0.22
HIPK3-201ENST00000303296 EHMT1Q9H9B1 1298 aa16.41■□□□□ 0.22
HIPK3-201ENST00000303296 BCAR3O75815 825 aa16.41■□□□□ 0.22
HIPK3-201ENST00000303296 ERCC5P28715 1186 aaPredicted RBP16.41■□□□□ 0.22
HIPK3-201ENST00000303296 MTHFSP49914 203 aa16.41■□□□□ 0.22
HIPK3-201ENST00000303296 SEPT10Q9P0V9 454 aa16.41■□□□□ 0.22
HIPK3-201ENST00000303296 NOB1Q9ULX3 412 aaKnown RBP16.41■□□□□ 0.22
HIPK3-201ENST00000303296 HYPKQ9NX55 129 aa16.41■□□□□ 0.22
HIPK3-201ENST00000303296 KIF18AQ8NI77 898 aa16.4■□□□□ 0.22
HIPK3-201ENST00000303296 CCDC155Q8N6L0 562 aa16.4■□□□□ 0.22
HIPK3-201ENST00000303296 SYCE3A1L190 88 aa16.4■□□□□ 0.22
HIPK3-201ENST00000303296 KIF4AO95239 1232 aa16.4■□□□□ 0.22
HIPK3-201ENST00000303296 GPRASP1Q5JY77 1395 aa16.4■□□□□ 0.22
HIPK3-201ENST00000303296 METTL24Q5JXM2 366 aa16.4■□□□□ 0.22
HIPK3-201ENST00000303296 FANCIQ9NVI1 1328 aa16.4■□□□□ 0.22
HIPK3-201ENST00000303296 KIAA0753Q2KHM9 967 aa16.4■□□□□ 0.22
HIPK3-201ENST00000303296 HSF2BPO75031 334 aa16.39■□□□□ 0.21
HIPK3-201ENST00000303296 CTNNA3Q9UI47 895 aa16.39■□□□□ 0.21
HIPK3-201ENST00000303296 GMNNO75496 209 aa16.39■□□□□ 0.21
HIPK3-201ENST00000303296 RAB34Q9BZG1 259 aa16.39■□□□□ 0.21
HIPK3-201ENST00000303296 RNF216Q9NWF9 866 aaPredicted RBP16.39■□□□□ 0.21
HIPK3-201ENST00000303296 CCDC174Q6PII3 467 aa16.39■□□□□ 0.21
HIPK3-201ENST00000303296 PHACTR2O75167 634 aa16.39■□□□□ 0.21
HIPK3-201ENST00000303296 SMC6Q96SB8 1091 aa16.39■□□□□ 0.21
HIPK3-201ENST00000303296 ZPR1O75312 459 aa16.38■□□□□ 0.21
HIPK3-201ENST00000303296 BAG4O95429 457 aaKnown RBP16.38■□□□□ 0.21
HIPK3-201ENST00000303296 RSPH3Q86UC2 560 aa16.38■□□□□ 0.21
HIPK3-201ENST00000303296 GAS2L2Q8NHY3 880 aa16.38■□□□□ 0.21
HIPK3-201ENST00000303296 CRCPO75575 148 aa16.38■□□□□ 0.21
HIPK3-201ENST00000303296 CYB5RLQ6IPT4 315 aa16.38■□□□□ 0.21
HIPK3-201ENST00000303296 FERMT3Q86UX7 667 aa16.38■□□□□ 0.21
HIPK3-201ENST00000303296 CEP126Q9P2H0 1117 aa16.38■□□□□ 0.21
HIPK3-201ENST00000303296 SMIM23A6NLE4 172 aa16.38■□□□□ 0.21
HIPK3-201ENST00000303296 DNAAF4Q8WXU2 420 aa16.38■□□□□ 0.21
HIPK3-201ENST00000303296 MYO15BQ96JP2 1530 aa16.38■□□□□ 0.21
HIPK3-201ENST00000303296 K7ELQ4 463 aaPredicted RBP16.38■□□□□ 0.21
HIPK3-201ENST00000303296 HSPA4P34932 840 aa16.38■□□□□ 0.21
HIPK3-201ENST00000303296 PDE1CQ14123 709 aaPredicted RBP16.38■□□□□ 0.21
HIPK3-201ENST00000303296 CAVIN4Q5BKX8 364 aa16.38■□□□□ 0.21
HIPK3-201ENST00000303296 BANK1Q8NDB2 785 aa16.38■□□□□ 0.21
HIPK3-201ENST00000303296 YEATS4O95619 227 aa16.38■□□□□ 0.21
HIPK3-201ENST00000303296 PDZRN3Q9UPQ7 1066 aa16.37■□□□□ 0.21
HIPK3-201ENST00000303296 CEP83Q9Y592 693 aa16.37■□□□□ 0.21
HIPK3-201ENST00000303296 RFC1P35251 1148 aaPredicted RBP16.37■□□□□ 0.21
HIPK3-201ENST00000303296 CEP120Q8N960 986 aa16.37■□□□□ 0.21
HIPK3-201ENST00000303296 WHAMMQ8TF30 809 aa16.37■□□□□ 0.21
HIPK3-201ENST00000303296 STX6O43752 255 aa16.37■□□□□ 0.21
HIPK3-201ENST00000303296 IDEP14735 1019 aa16.37■□□□□ 0.21
HIPK3-201ENST00000303296 CCT6BQ92526 530 aa16.37■□□□□ 0.21
HIPK3-201ENST00000303296 KIF5AQ12840 1032 aa16.36■□□□□ 0.21
HIPK3-201ENST00000303296 CARMIL1Q5VZK9 1371 aa16.36■□□□□ 0.21
HIPK3-201ENST00000303296 PPP2R5CQ13362 524 aa16.36■□□□□ 0.21
HIPK3-201ENST00000303296 IL1RAPL2Q9NP60 686 aa16.36■□□□□ 0.21
HIPK3-201ENST00000303296 CNNM3Q8NE01 707 aa16.36■□□□□ 0.21
HIPK3-201ENST00000303296 KRT13P13646 458 aa16.36■□□□□ 0.21
HIPK3-201ENST00000303296 DACT3Q96B18 629 aaPredicted RBP16.36■□□□□ 0.21
HIPK3-201ENST00000303296 TXNDC16Q9P2K2 825 aa16.36■□□□□ 0.21
HIPK3-201ENST00000303296 TWISTNBQ3B726 338 aaPredicted RBP16.36■□□□□ 0.21
HIPK3-201ENST00000303296 CCDC83Q8IWF9 413 aa16.36■□□□□ 0.21
HIPK3-201ENST00000303296 CCDC65Q8IXS2 484 aa16.36■□□□□ 0.21
HIPK3-201ENST00000303296 ZBED9Q6R2W3 1325 aa16.36■□□□□ 0.21
HIPK3-201ENST00000303296 CKAP4Q07065 602 aaKnown RBP16.35■□□□□ 0.21
HIPK3-201ENST00000303296 MSL1Q68DK7 614 aa16.35■□□□□ 0.21
HIPK3-201ENST00000303296 CALCOCO1Q9P1Z2 691 aa16.35■□□□□ 0.21
HIPK3-201ENST00000303296 CUX2O14529 1486 aa16.35■□□□□ 0.21
HIPK3-201ENST00000303296 GBP7Q8N8V2 638 aaPredicted RBP16.35■□□□□ 0.21
HIPK3-201ENST00000303296 TBC1D5Q92609 795 aa16.35■□□□□ 0.21
HIPK3-201ENST00000303296 CALML4Q96GE6 196 aa16.35■□□□□ 0.21
HIPK3-201ENST00000303296 SELENOSQ9BQE4 189 aa16.35■□□□□ 0.21
HIPK3-201ENST00000303296 NAPBQ9H115 298 aa16.35■□□□□ 0.21
HIPK3-201ENST00000303296 EEF2P13639 858 aaKnown RBP16.35■□□□□ 0.21
HIPK3-201ENST00000303296 CUL4BQ13620 913 aa16.35■□□□□ 0.21
HIPK3-201ENST00000303296 AKNAD1Q5T1N1 836 aa16.35■□□□□ 0.21
HIPK3-201ENST00000303296 CCDC89Q8N998 374 aa16.35■□□□□ 0.21
HIPK3-201ENST00000303296 C16orf45Q96MC5 204 aaPredicted RBP16.35■□□□□ 0.21
HIPK3-201ENST00000303296 CLIP2Q9UDT6 1046 aa16.35■□□□□ 0.21
HIPK3-201ENST00000303296 GTF2A1P52655 376 aaPredicted RBP16.35■□□□□ 0.21
HIPK3-201ENST00000303296 BIN1O00499 593 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms