RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 PCDH11YQ9BZA8 1340 aa15.11■□□□□ 0.01
TPM3-202ENST00000302206 CYP27B1O15528 508 aa15.1■□□□□ 0.01
TPM3-202ENST00000302206 FAM98CQ17RN3 349 aaKnown RBP15.1■□□□□ 0.01
TPM3-202ENST00000302206 FAM182BQ5T319 152 aa15.1■□□□□ 0.01
TPM3-202ENST00000302206 ZCRB1Q8TBF4 217 aaKnown RBP15.1■□□□□ 0.01
TPM3-202ENST00000302206 GCC1Q96CN9 775 aa15.1■□□□□ 0.01
TPM3-202ENST00000302206 KCNQ3O43525 872 aa15.09■□□□□ 0.01
TPM3-202ENST00000302206 GIGYF1O75420 1035 aaPredicted RBP15.09■□□□□ 0.01
TPM3-202ENST00000302206 IL2RBP14784 551 aa15.09■□□□□ 0.01
TPM3-202ENST00000302206 EVA1CP58658 441 aa15.09■□□□□ 0.01
TPM3-202ENST00000302206 NKX1-1Q15270 411 aaPredicted RBP15.09■□□□□ 0.01
TPM3-202ENST00000302206 FAM161AQ3B820 660 aa15.09■□□□□ 0.01
TPM3-202ENST00000302206 RNF216Q9NWF9 866 aaPredicted RBP15.09■□□□□ 0.01
TPM3-202ENST00000302206 TNS1Q9HBL0 1735 aaKnown RBP15.09■□□□□ 0.01
TPM3-202ENST00000302206 DISP2A7MBM2 1401 aa15.09■□□□□ 0.01
TPM3-202ENST00000302206 SKAP1Q86WV1 359 aa15.08■□□□□ 0
TPM3-202ENST00000302206 RPAP2Q8IXW5 612 aaPredicted RBP15.08■□□□□ 0
TPM3-202ENST00000302206 NRAPQ86VF7 1730 aa15.08■□□□□ 0
TPM3-202ENST00000302206 RGS3P49796 1198 aa15.07■□□□□ 0
TPM3-202ENST00000302206 FKBP5Q13451 457 aaPredicted RBP15.07■□□□□ 0
TPM3-202ENST00000302206 ZNF790Q6PG37 636 aa15.07■□□□□ 0
TPM3-202ENST00000302206 DBF4Q9UBU7 674 aaPredicted RBP15.07■□□□□ 0
TPM3-202ENST00000302206 ATP10DQ9P241 1426 aa15.07■□□□□ 0
TPM3-202ENST00000302206 SHANK3Q9BYB0 1731 aa15.06■□□□□ 0
TPM3-202ENST00000302206 DCAF8L1A6NGE4 600 aa15.06■□□□□ 0
TPM3-202ENST00000302206 ERVV-2B6SEH9 535 aa15.06■□□□□ 0
TPM3-202ENST00000302206 NUCB1Q02818 461 aa15.06■□□□□ 0
TPM3-202ENST00000302206 LARP1Q6PKG0 1096 aaKnown RBP15.06■□□□□ 0
TPM3-202ENST00000302206 ANKRD44Q8N8A2 993 aa15.06■□□□□ 0
TPM3-202ENST00000302206 BTG4Q9NY30 223 aa15.06■□□□□ 0
TPM3-202ENST00000302206 GNAI3P08754 354 aa15.05■□□□□ -0
TPM3-202ENST00000302206 CABP4P57796 275 aa15.05■□□□□ -0
TPM3-202ENST00000302206 EZH2Q15910 746 aaKnown RBP15.05■□□□□ -0
TPM3-202ENST00000302206 SIRT2Q8IXJ6 389 aa15.05■□□□□ -0
TPM3-202ENST00000302206 NFATC2IPQ8NCF5 419 aa15.05■□□□□ -0
TPM3-202ENST00000302206 F6X3S4 739 aa15.04■□□□□ -0
TPM3-202ENST00000302206 EIF2S2P20042 333 aaKnown RBP15.04■□□□□ -0
TPM3-202ENST00000302206 NECTIN2Q92692 538 aa15.04■□□□□ -0
TPM3-202ENST00000302206 STRN4Q9NRL3 753 aa15.04■□□□□ -0
TPM3-202ENST00000302206 HYPKQ9NX55 129 aa15.04■□□□□ -0
TPM3-202ENST00000302206 CHPF2Q9P2E5 772 aa15.04■□□□□ -0
TPM3-202ENST00000302206 IBTKQ9P2D0 1353 aaPredicted RBP15.03■□□□□ -0
TPM3-202ENST00000302206 C8orf34Q49A92 452 aa15.03■□□□□ -0
TPM3-202ENST00000302206 CEP85Q6P2H3 762 aa15.03■□□□□ -0
TPM3-202ENST00000302206 SLC4A10Q6U841 1118 aa15.03■□□□□ -0
TPM3-202ENST00000302206 MEIS3Q99687 375 aa15.03■□□□□ -0
TPM3-202ENST00000302206 DCTPP1Q9H773 170 aa15.03■□□□□ -0
TPM3-202ENST00000302206 C1orf115Q9H7X2 142 aa15.03■□□□□ -0
TPM3-202ENST00000302206 DDX21Q9NR30 783 aaKnown RBP eCLIP15.03■□□□□ -0
TPM3-202ENST00000302206 PAPPAQ13219 1627 aa15.03■□□□□ -0
TPM3-202ENST00000302206 CHD1LQ86WJ1 897 aa15.02■□□□□ -0
TPM3-202ENST00000302206 TTC5Q8N0Z6 440 aa15.02■□□□□ -0
TPM3-202ENST00000302206 FMNL2Q96PY5 1086 aa15.02■□□□□ -0
TPM3-202ENST00000302206 PHAXQ9H814 394 aaKnown RBP15.02■□□□□ -0
TPM3-202ENST00000302206 C5P01031 1676 aa15.02□□□□□ -0.01
TPM3-202ENST00000302206 LAMB4A4D0S4 1761 aa15.01□□□□□ -0.01
TPM3-202ENST00000302206 HMMRO75330 724 aa15.01□□□□□ -0.01
TPM3-202ENST00000302206 GNAI2P04899 355 aa15.01□□□□□ -0.01
TPM3-202ENST00000302206 SNRPA1P09661 255 aaKnown RBP15.01□□□□□ -0.01
TPM3-202ENST00000302206 PPP1R1BQ9UD71 204 aaPredicted RBP15.01□□□□□ -0.01
TPM3-202ENST00000302206 WNK3Q9BYP7 1800 aa15.01□□□□□ -0.01
TPM3-202ENST00000302206 UBR2Q8IWV8 1755 aa15.01□□□□□ -0.01
TPM3-202ENST00000302206 THSD7AQ9UPZ6 1657 aa15□□□□□ -0.01
TPM3-202ENST00000302206 MAPK8IP2Q13387 824 aaPredicted RBP15□□□□□ -0.01
TPM3-202ENST00000302206 DNAAF4Q8WXU2 420 aa15□□□□□ -0.01
TPM3-202ENST00000302206 CAMKK2Q96RR4 588 aa15□□□□□ -0.01
TPM3-202ENST00000302206 SRCIN1Q9C0H9 1055 aa15□□□□□ -0.01
TPM3-202ENST00000302206 ERBB4Q15303 1308 aa14.99□□□□□ -0.01
TPM3-202ENST00000302206 ALDH1L1O75891 902 aa14.99□□□□□ -0.01
TPM3-202ENST00000302206 DDX58O95786 925 aaKnown RBP14.99□□□□□ -0.01
TPM3-202ENST00000302206 ANP32AP39687 249 aaKnown RBP14.99□□□□□ -0.01
TPM3-202ENST00000302206 SLC39A6Q13433 755 aa14.99□□□□□ -0.01
TPM3-202ENST00000302206 ZNF496Q96IT1 587 aaPredicted RBP14.99□□□□□ -0.01
TPM3-202ENST00000302206 CDCA7Q9BWT1 371 aaPredicted RBP14.99□□□□□ -0.01
TPM3-202ENST00000302206 RREB1Q92766 1687 aa14.99□□□□□ -0.01
TPM3-202ENST00000302206 TNS2Q63HR2 1409 aa14.99□□□□□ -0.01
TPM3-202ENST00000302206 ADCY9O60503 1353 aa14.98□□□□□ -0.01
TPM3-202ENST00000302206 SPATA31A5Q5VU36 1347 aa14.98□□□□□ -0.01
TPM3-202ENST00000302206 SPATA31A7Q8IWB4 1347 aa14.98□□□□□ -0.01
TPM3-202ENST00000302206 TRIM37O94972 964 aa14.98□□□□□ -0.01
TPM3-202ENST00000302206 APBA3O96018 575 aa14.98□□□□□ -0.01
TPM3-202ENST00000302206 PDIA6Q15084 440 aa14.98□□□□□ -0.01
TPM3-202ENST00000302206 BEND3Q5T5X7 828 aa14.98□□□□□ -0.01
TPM3-202ENST00000302206 NBPF14Q5TI25 921 aa14.98□□□□□ -0.01
TPM3-202ENST00000302206 KSR2Q6VAB6 950 aa14.98□□□□□ -0.01
TPM3-202ENST00000302206 FAM196AQ6ZSG2 479 aa14.98□□□□□ -0.01
TPM3-202ENST00000302206 THRAP3Q9Y2W1 955 aaKnown RBP14.98□□□□□ -0.01
TPM3-202ENST00000302206 PI4KAP2A4QPH2 592 aa14.97□□□□□ -0.01
TPM3-202ENST00000302206 ANKRD45Q5TZF3 282 aa14.97□□□□□ -0.01
TPM3-202ENST00000302206 PI4KAP1Q8N8J0 262 aa14.97□□□□□ -0.01
TPM3-202ENST00000302206 USP44Q9H0E7 712 aa14.97□□□□□ -0.01
TPM3-202ENST00000302206 HDAC5Q9UQL6 1122 aa14.97□□□□□ -0.01
TPM3-202ENST00000302206 NUP188Q5SRE5 1749 aa14.97□□□□□ -0.01
TPM3-202ENST00000302206 KCPQ6ZWJ8 1503 aa14.97□□□□□ -0.01
TPM3-202ENST00000302206 PRAMEF22A3QJZ6 481 aa14.96□□□□□ -0.01
TPM3-202ENST00000302206 UBTFL1P0CB47 393 aaPredicted RBP14.96□□□□□ -0.01
TPM3-202ENST00000302206 ATP8B2P98198 1209 aa14.96□□□□□ -0.01
TPM3-202ENST00000302206 SPON1Q9HCB6 807 aa14.96□□□□□ -0.01
TPM3-202ENST00000302206 TOGARAM1Q9Y4F4 1720 aa14.96□□□□□ -0.01
TPM3-202ENST00000302206 PROSER3Q2NL68 480 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms