RNA–Protein interactions for RNA: ENST00000301904.3

SCARA3-201, Transcript of scavenger receptor class A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARA3, Length 3,510 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARA3-201ENST00000301904 ABCA6Q8N139 1617 aa12.41□□□□□ -0.42
SCARA3-201ENST00000301904 GJB2P29033 226 aa12.41□□□□□ -0.42
SCARA3-201ENST00000301904 TYRO3Q06418 890 aa12.41□□□□□ -0.42
SCARA3-201ENST00000301904 INTS4Q96HW7 963 aaKnown RBP12.41□□□□□ -0.42
SCARA3-201ENST00000301904 CBX8Q9HC52 389 aa12.41□□□□□ -0.42
SCARA3-201ENST00000301904 RRS1Q15050 365 aaKnown RBP12.41□□□□□ -0.42
SCARA3-201ENST00000301904 TCEANC2Q96MN5 208 aa12.4□□□□□ -0.42
SCARA3-201ENST00000301904 DNAJC25Q9H1X3 360 aa12.4□□□□□ -0.42
SCARA3-201ENST00000301904 CLIP2Q9UDT6 1046 aa12.4□□□□□ -0.42
SCARA3-201ENST00000301904 MRVI1Q9Y6F6 885 aa12.4□□□□□ -0.42
SCARA3-201ENST00000301904 MORC2Q9Y6X9 1032 aaPredicted RBP12.4□□□□□ -0.42
SCARA3-201ENST00000301904 SPHKAPQ2M3C7 1700 aa12.4□□□□□ -0.42
SCARA3-201ENST00000301904 PRR29P0C7W0 189 aa12.4□□□□□ -0.42
SCARA3-201ENST00000301904 POLKQ9UBT6 870 aa12.4□□□□□ -0.42
SCARA3-201ENST00000301904 PTCH1Q13635 1447 aa12.4□□□□□ -0.42
SCARA3-201ENST00000301904 RTL1A6NKG5 1358 aa12.4□□□□□ -0.42
SCARA3-201ENST00000301904 RUFY3Q7L099 469 aa12.4□□□□□ -0.43
SCARA3-201ENST00000301904 LRRN4CLQ8ND94 238 aa12.4□□□□□ -0.43
SCARA3-201ENST00000301904 FOSBP53539 338 aa12.39□□□□□ -0.43
SCARA3-201ENST00000301904 HNRNPH2P55795 449 aaKnown RBP12.39□□□□□ -0.43
SCARA3-201ENST00000301904 RBM6P78332 1123 aaKnown RBP12.39□□□□□ -0.43
SCARA3-201ENST00000301904 PLPPR3Q6T4P5 718 aa12.39□□□□□ -0.43
SCARA3-201ENST00000301904 NEK11Q8NG66 645 aa12.39□□□□□ -0.43
SCARA3-201ENST00000301904 DACT1Q9NYF0 836 aa12.39□□□□□ -0.43
SCARA3-201ENST00000301904 ADGRB2O60241 1585 aa12.39□□□□□ -0.43
SCARA3-201ENST00000301904 PNMA6EA0A0J9YXQ4 647 aa12.39□□□□□ -0.43
SCARA3-201ENST00000301904 CEBPZQ03701 1054 aaKnown RBP12.39□□□□□ -0.43
SCARA3-201ENST00000301904 TMED8Q6PL24 325 aaPredicted RBP12.39□□□□□ -0.43
SCARA3-201ENST00000301904 FAM200AQ8TCP9 573 aa12.39□□□□□ -0.43
SCARA3-201ENST00000301904 TRPM2O94759 1503 aa12.39□□□□□ -0.43
SCARA3-201ENST00000301904 GOLGA6L4A6NEF3 574 aa12.38□□□□□ -0.43
SCARA3-201ENST00000301904 CASTP20810 708 aaKnown RBP12.38□□□□□ -0.43
SCARA3-201ENST00000301904 NUP62CLQ9H1M0 184 aa12.38□□□□□ -0.43
SCARA3-201ENST00000301904 ATP10DQ9P241 1426 aa12.38□□□□□ -0.43
SCARA3-201ENST00000301904 MAP3K11Q16584 847 aa12.38□□□□□ -0.43
SCARA3-201ENST00000301904 CWC27Q6UX04 472 aaKnown RBP12.38□□□□□ -0.43
SCARA3-201ENST00000301904 TTC6Q86TZ1 520 aa12.38□□□□□ -0.43
SCARA3-201ENST00000301904 HOMEZQ8IX15 550 aa12.38□□□□□ -0.43
SCARA3-201ENST00000301904 TNMDQ9H2S6 317 aa12.38□□□□□ -0.43
SCARA3-201ENST00000301904 BRPF1P55201 1214 aaPredicted RBP12.38□□□□□ -0.43
SCARA3-201ENST00000301904 SKIDA1Q1XH10 827 aa12.38□□□□□ -0.43
SCARA3-201ENST00000301904 ERCC4Q92889 916 aaPredicted RBP12.38□□□□□ -0.43
SCARA3-201ENST00000301904 ZNF428Q96B54 188 aa12.38□□□□□ -0.43
SCARA3-201ENST00000301904 USP16Q9Y5T5 823 aa12.38□□□□□ -0.43
SCARA3-201ENST00000301904 PIK3R4Q99570 1358 aa12.38□□□□□ -0.43
SCARA3-201ENST00000301904 ZNF75DP51815 510 aa12.37□□□□□ -0.43
SCARA3-201ENST00000301904 ERCC6LQ2NKX8 1250 aa12.37□□□□□ -0.43
SCARA3-201ENST00000301904 DRC1Q96MC2 740 aa12.37□□□□□ -0.43
SCARA3-201ENST00000301904 TERF2IPQ9NYB0 399 aa12.37□□□□□ -0.43
SCARA3-201ENST00000301904 HMMRO75330 724 aa12.37□□□□□ -0.43
SCARA3-201ENST00000301904 ZNF397Q8NF99 534 aaPredicted RBP12.37□□□□□ -0.43
SCARA3-201ENST00000301904 NOL10Q9BSC4 688 aaKnown RBP12.37□□□□□ -0.43
SCARA3-201ENST00000301904 SNX14Q9Y5W7 946 aa12.37□□□□□ -0.43
SCARA3-201ENST00000301904 CFAP65Q6ZU64 1925 aaKnown RBP12.37□□□□□ -0.43
SCARA3-201ENST00000301904 PREX2Q70Z35 1606 aa12.37□□□□□ -0.43
SCARA3-201ENST00000301904 KNDC1Q76NI1 1749 aa12.37□□□□□ -0.43
SCARA3-201ENST00000301904 TPM3P06753 285 aa12.37□□□□□ -0.43
SCARA3-201ENST00000301904 COL9A3Q14050 684 aaPredicted RBP12.37□□□□□ -0.43
SCARA3-201ENST00000301904 PTPN14Q15678 1187 aa12.37□□□□□ -0.43
SCARA3-201ENST00000301904 PRAM1Q96QH2 718 aa12.37□□□□□ -0.43
SCARA3-201ENST00000301904 LRRCC1Q9C099 1032 aa12.37□□□□□ -0.43
SCARA3-201ENST00000301904 ZNF446Q9NWS9 450 aa12.37□□□□□ -0.43
SCARA3-201ENST00000301904 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.37□□□□□ -0.43
SCARA3-201ENST00000301904 PPFIA3O75145 1194 aa12.36□□□□□ -0.43
SCARA3-201ENST00000301904 GOLGA6L1Q8N7Z2 621 aa12.36□□□□□ -0.43
SCARA3-201ENST00000301904 MTMR6Q9Y217 621 aa12.36□□□□□ -0.43
SCARA3-201ENST00000301904 STK3Q13188 491 aa12.36□□□□□ -0.43
SCARA3-201ENST00000301904 TSPYL1Q9H0U9 437 aa12.36□□□□□ -0.43
SCARA3-201ENST00000301904 ADGRL1O94910 1474 aa12.36□□□□□ -0.43
SCARA3-201ENST00000301904 ZNF853P0CG23 659 aa12.36□□□□□ -0.43
SCARA3-201ENST00000301904 ZCCHC17Q9NP64 241 aaKnown RBP12.36□□□□□ -0.43
SCARA3-201ENST00000301904 SLC52A1Q9NWF4 448 aa12.36□□□□□ -0.43
SCARA3-201ENST00000301904 RGS12O14924 1447 aa12.35□□□□□ -0.43
SCARA3-201ENST00000301904 ZNF165P49910 485 aa12.35□□□□□ -0.43
SCARA3-201ENST00000301904 ADCK5Q3MIX3 580 aa12.35□□□□□ -0.43
SCARA3-201ENST00000301904 HDGFL2Q7Z4V5 671 aaPredicted RBP12.35□□□□□ -0.43
SCARA3-201ENST00000301904 LIMCH1Q9UPQ0 1083 aa12.35□□□□□ -0.43
SCARA3-201ENST00000301904 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.35□□□□□ -0.43
SCARA3-201ENST00000301904 SKILP12757 684 aa12.35□□□□□ -0.43
SCARA3-201ENST00000301904 TMEM87AQ8NBN3 555 aa12.35□□□□□ -0.43
SCARA3-201ENST00000301904 BICD2Q8TD16 824 aa12.35□□□□□ -0.43
SCARA3-201ENST00000301904 EPC1Q9H2F5 836 aa12.35□□□□□ -0.43
SCARA3-201ENST00000301904 CDC37L1Q7L3B6 337 aa12.34□□□□□ -0.43
SCARA3-201ENST00000301904 JAKMIP1Q96N16 626 aaKnown RBP12.34□□□□□ -0.43
SCARA3-201ENST00000301904 PAXBP1Q9Y5B6 917 aa12.34□□□□□ -0.43
SCARA3-201ENST00000301904 MAP3K4Q9Y6R4 1608 aa12.34□□□□□ -0.43
SCARA3-201ENST00000301904 LARP1BQ659C4 914 aaKnown RBP12.34□□□□□ -0.43
SCARA3-201ENST00000301904 DDX11Q96FC9 970 aa12.34□□□□□ -0.43
SCARA3-201ENST00000301904 RNF216Q9NWF9 866 aaPredicted RBP12.34□□□□□ -0.43
SCARA3-201ENST00000301904 ARHGEF40Q8TER5 1519 aa12.34□□□□□ -0.43
SCARA3-201ENST00000301904 SBNO2Q9Y2G9 1366 aa12.34□□□□□ -0.43
SCARA3-201ENST00000301904 RAD50Q92878 1312 aa12.34□□□□□ -0.43
SCARA3-201ENST00000301904 GYS2P54840 703 aa12.34□□□□□ -0.43
SCARA3-201ENST00000301904 NME9Q86XW9 330 aa12.34□□□□□ -0.43
SCARA3-201ENST00000301904 PRPF40BQ6NWY9 871 aaKnown RBP12.33□□□□□ -0.43
SCARA3-201ENST00000301904 NR1I2O75469 434 aa12.33□□□□□ -0.44
SCARA3-201ENST00000301904 HSPA4P34932 840 aa12.33□□□□□ -0.44
SCARA3-201ENST00000301904 OS9Q13438 667 aaPredicted RBP12.33□□□□□ -0.44
SCARA3-201ENST00000301904 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.33□□□□□ -0.44
SCARA3-201ENST00000301904 ZNF622Q969S3 477 aaKnown RBP eCLIP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms