RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 CEP135Q66GS9 1140 aa13.08□□□□□ -0.32
SNX20-201ENST00000300590 ZSCAN25Q6NSZ9 544 aa13.08□□□□□ -0.32
SNX20-201ENST00000300590 KRT222Q8N1A0 295 aa13.08□□□□□ -0.32
SNX20-201ENST00000300590 TMEM87AQ8NBN3 555 aa13.08□□□□□ -0.32
SNX20-201ENST00000300590 CBX8Q9HC52 389 aa13.08□□□□□ -0.32
SNX20-201ENST00000300590 DACT1Q9NYF0 836 aa13.08□□□□□ -0.32
SNX20-201ENST00000300590 SNX14Q9Y5W7 946 aa13.08□□□□□ -0.32
SNX20-201ENST00000300590 CLIP2Q9UDT6 1046 aa13.07□□□□□ -0.32
SNX20-201ENST00000300590 TET3O43151 1660 aa13.07□□□□□ -0.32
SNX20-201ENST00000300590 KMT5BQ4FZB7 885 aa13.07□□□□□ -0.32
SNX20-201ENST00000300590 FILIP1Q7Z7B0 1213 aa13.07□□□□□ -0.32
SNX20-201ENST00000300590 MRVI1Q9Y6F6 885 aa13.07□□□□□ -0.32
SNX20-201ENST00000300590 KIF1BO60333 1816 aa13.07□□□□□ -0.32
SNX20-201ENST00000300590 USP27XA6NNY8 438 aa13.06□□□□□ -0.32
SNX20-201ENST00000300590 HSPA4P34932 840 aa13.06□□□□□ -0.32
SNX20-201ENST00000300590 ELF2Q15723 593 aa13.06□□□□□ -0.32
SNX20-201ENST00000300590 CERS3Q8IU89 383 aa13.06□□□□□ -0.32
SNX20-201ENST00000300590 DNAJC25Q9H1X3 360 aa13.06□□□□□ -0.32
SNX20-201ENST00000300590 PNPLA6Q8IY17 1366 aa13.06□□□□□ -0.32
SNX20-201ENST00000300590 ABCC1P33527 1531 aa13.06□□□□□ -0.32
SNX20-201ENST00000300590 CCDC66A2RUB6 948 aa13.06□□□□□ -0.32
SNX20-201ENST00000300590 TTC6Q86TZ1 520 aa13.06□□□□□ -0.32
SNX20-201ENST00000300590 TCEANC2Q96MN5 208 aa13.06□□□□□ -0.32
SNX20-201ENST00000300590 ARHGEF40Q8TER5 1519 aa13.06□□□□□ -0.32
SNX20-201ENST00000300590 CCDC144BQ3MJ40 725 aa13.06□□□□□ -0.32
SNX20-201ENST00000300590 WAPLQ7Z5K2 1190 aa13.06□□□□□ -0.32
SNX20-201ENST00000300590 CCDC144CPQ8IYA2 1237 aa13.06□□□□□ -0.32
SNX20-201ENST00000300590 PUS7Q96PZ0 661 aaKnown RBP13.06□□□□□ -0.32
SNX20-201ENST00000300590 MTMR6Q9Y217 621 aa13.06□□□□□ -0.32
SNX20-201ENST00000300590 MROH2AA6NES4 1674 aa13.06□□□□□ -0.32
SNX20-201ENST00000300590 RIMS2Q9UQ26 1411 aa13.05□□□□□ -0.32
SNX20-201ENST00000300590 LARP1BQ659C4 914 aaKnown RBP13.05□□□□□ -0.32
SNX20-201ENST00000300590 TIGD1Q96MW7 591 aa13.05□□□□□ -0.32
SNX20-201ENST00000300590 JAKMIP1Q96N16 626 aaKnown RBP13.05□□□□□ -0.32
SNX20-201ENST00000300590 A0A087WWV3 80 aa13.05□□□□□ -0.32
SNX20-201ENST00000300590 GTF3C6Q969F1 213 aa13.05□□□□□ -0.32
SNX20-201ENST00000300590 LRRFIP2Q9Y608 721 aaKnown RBP13.05□□□□□ -0.32
SNX20-201ENST00000300590 ZNF165P49910 485 aa13.05□□□□□ -0.32
SNX20-201ENST00000300590 ADGRB1O14514 1584 aa13.04□□□□□ -0.32
SNX20-201ENST00000300590 ZNF75DP51815 510 aa13.04□□□□□ -0.32
SNX20-201ENST00000300590 PAXBP1Q9Y5B6 917 aa13.04□□□□□ -0.32
SNX20-201ENST00000300590 MORC2Q9Y6X9 1032 aaPredicted RBP13.04□□□□□ -0.32
SNX20-201ENST00000300590 SURF6O75683 361 aaKnown RBP13.04□□□□□ -0.32
SNX20-201ENST00000300590 CEBPZQ03701 1054 aaKnown RBP13.04□□□□□ -0.32
SNX20-201ENST00000300590 PTPN14Q15678 1187 aa13.04□□□□□ -0.32
SNX20-201ENST00000300590 FBXO38Q6PIJ6 1188 aa13.04□□□□□ -0.32
SNX20-201ENST00000300590 BICD2Q8TD16 824 aa13.04□□□□□ -0.32
SNX20-201ENST00000300590 NCKAP5LQ9HCH0 1330 aa13.04□□□□□ -0.32
SNX20-201ENST00000300590 ZFYVE16Q7Z3T8 1539 aa13.04□□□□□ -0.32
SNX20-201ENST00000300590 ADCK5Q3MIX3 580 aa13.03□□□□□ -0.32
SNX20-201ENST00000300590 PRPF40BQ6NWY9 871 aaKnown RBP13.03□□□□□ -0.32
SNX20-201ENST00000300590 MYO3AQ8NEV4 1616 aa13.03□□□□□ -0.32
SNX20-201ENST00000300590 NRXN1Q9ULB1 1477 aa13.03□□□□□ -0.32
SNX20-201ENST00000300590 KRT85P78386 507 aa13.03□□□□□ -0.32
SNX20-201ENST00000300590 IDI1Q13907 227 aa13.03□□□□□ -0.32
SNX20-201ENST00000300590 REREQ9P2R6 1566 aa13.03□□□□□ -0.32
SNX20-201ENST00000300590 STK3Q13188 491 aa13.03□□□□□ -0.32
SNX20-201ENST00000300590 ZBTB9Q96C00 473 aa13.03□□□□□ -0.32
SNX20-201ENST00000300590 PDRG1Q9NUG6 133 aa13.03□□□□□ -0.32
SNX20-201ENST00000300590 TSPYL4Q9UJ04 414 aa13.03□□□□□ -0.32
SNX20-201ENST00000300590 FOXO3O43524 673 aa13.02□□□□□ -0.32
SNX20-201ENST00000300590 GORABQ5T7V8 394 aa13.02□□□□□ -0.32
SNX20-201ENST00000300590 CDC37L1Q7L3B6 337 aa13.02□□□□□ -0.32
SNX20-201ENST00000300590 ZNF397Q8NF99 534 aaPredicted RBP13.02□□□□□ -0.32
SNX20-201ENST00000300590 USP16Q9Y5T5 823 aa13.02□□□□□ -0.32
SNX20-201ENST00000300590 KIF24Q5T7B8 1368 aa13.02□□□□□ -0.32
SNX20-201ENST00000300590 HAP1P54257 671 aaPredicted RBP13.02□□□□□ -0.33
SNX20-201ENST00000300590 PTPRCP08575 1304 aa13.02□□□□□ -0.33
SNX20-201ENST00000300590 GOLGA6L19H0YKK7 550 aa13.01□□□□□ -0.33
SNX20-201ENST00000300590 SKILP12757 684 aa13.01□□□□□ -0.33
SNX20-201ENST00000300590 CCT4P50991 539 aaKnown RBP13.01□□□□□ -0.33
SNX20-201ENST00000300590 FOSBP53539 338 aa13.01□□□□□ -0.33
SNX20-201ENST00000300590 TTC14Q96N46 770 aa13.01□□□□□ -0.33
SNX20-201ENST00000300590 RPGRIP1LQ68CZ1 1315 aa13.01□□□□□ -0.33
SNX20-201ENST00000300590 CHL1O00533 1208 aa13.01□□□□□ -0.33
SNX20-201ENST00000300590 POLR3GO15318 223 aaPredicted RBP13.01□□□□□ -0.33
SNX20-201ENST00000300590 SPATA32Q96LK8 384 aa13.01□□□□□ -0.33
SNX20-201ENST00000300590 STK31Q9BXU1 1019 aa13.01□□□□□ -0.33
SNX20-201ENST00000300590 TRIM34Q9BYJ4 488 aa13.01□□□□□ -0.33
SNX20-201ENST00000300590 USP32Q8NFA0 1604 aa13.01□□□□□ -0.33
SNX20-201ENST00000300590 RBM6P78332 1123 aaKnown RBP13.01□□□□□ -0.33
SNX20-201ENST00000300590 COG3Q96JB2 828 aa13.01□□□□□ -0.33
SNX20-201ENST00000300590 NPATQ14207 1427 aa13.01□□□□□ -0.33
SNX20-201ENST00000300590 ERCC6L2Q5T890 1561 aa13□□□□□ -0.33
SNX20-201ENST00000300590 ATP7AQ04656 1500 aa13□□□□□ -0.33
SNX20-201ENST00000300590 RAD50Q92878 1312 aa13□□□□□ -0.33
SNX20-201ENST00000300590 SGSM2O43147 1006 aa13□□□□□ -0.33
SNX20-201ENST00000300590 NR1I2O75469 434 aa13□□□□□ -0.33
SNX20-201ENST00000300590 ME3Q16798 604 aa13□□□□□ -0.33
SNX20-201ENST00000300590 SALL3Q9BXA9 1300 aa13□□□□□ -0.33
SNX20-201ENST00000300590 TNNT3P45378 269 aaPredicted RBP13□□□□□ -0.33
SNX20-201ENST00000300590 ERCC6LQ2NKX8 1250 aa13□□□□□ -0.33
SNX20-201ENST00000300590 HYPKQ9NX55 129 aa13□□□□□ -0.33
SNX20-201ENST00000300590 STAG3Q9UJ98 1225 aa13□□□□□ -0.33
SNX20-201ENST00000300590 SETBP1Q9Y6X0 1596 aa13□□□□□ -0.33
SNX20-201ENST00000300590 NUTM2FA1L443 756 aa13□□□□□ -0.33
SNX20-201ENST00000300590 ATP8B2P98198 1209 aa13□□□□□ -0.33
SNX20-201ENST00000300590 PTH1RQ03431 593 aa13□□□□□ -0.33
SNX20-201ENST00000300590 ERCC4Q92889 916 aaPredicted RBP13□□□□□ -0.33
SNX20-201ENST00000300590 OS9Q13438 667 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms