RNA–Protein interactions for RNA: ENST00000299084.8

SPRED1-201, Transcript of sprouty related EVH1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED1, Length 7,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-201ENST00000299084 IL27Q8NEV9 243 aa16.57■□□□□ 0.24
SPRED1-201ENST00000299084 HAUS7Q99871 368 aa16.57■□□□□ 0.24
SPRED1-201ENST00000299084 PHACTR2O75167 634 aa16.57■□□□□ 0.24
SPRED1-201ENST00000299084 SPECC1Q5M775 1068 aa16.57■□□□□ 0.24
SPRED1-201ENST00000299084 SPTY2D1Q68D10 685 aaPredicted RBP16.57■□□□□ 0.24
SPRED1-201ENST00000299084 CADPSQ9ULU8 1353 aa16.57■□□□□ 0.24
SPRED1-201ENST00000299084 XPCQ01831 940 aaPredicted RBP16.57■□□□□ 0.24
SPRED1-201ENST00000299084 KRT32Q14532 448 aa16.57■□□□□ 0.24
SPRED1-201ENST00000299084 SMC1BQ8NDV3 1235 aa16.57■□□□□ 0.24
SPRED1-201ENST00000299084 NAPBQ9H115 298 aa16.57■□□□□ 0.24
SPRED1-201ENST00000299084 CACYBPQ9HB71 228 aaKnown RBP16.56■□□□□ 0.24
SPRED1-201ENST00000299084 CALML4Q96GE6 196 aa16.56■□□□□ 0.24
SPRED1-201ENST00000299084 TTC12Q9H892 705 aaPredicted RBP16.56■□□□□ 0.24
SPRED1-201ENST00000299084 TRAK2O60296 914 aa16.56■□□□□ 0.24
SPRED1-201ENST00000299084 CCDC89Q8N998 374 aa16.56■□□□□ 0.24
SPRED1-201ENST00000299084 RANBP6O60518 1105 aaKnown RBP16.56■□□□□ 0.24
SPRED1-201ENST00000299084 HDAC9Q9UKV0 1011 aa16.56■□□□□ 0.24
SPRED1-201ENST00000299084 USO1O60763 962 aaKnown RBP16.56■□□□□ 0.24
SPRED1-201ENST00000299084 UPF3BQ9BZI7 483 aaKnown RBP16.56■□□□□ 0.24
SPRED1-201ENST00000299084 ECM2O94769 699 aaPredicted RBP16.55■□□□□ 0.24
SPRED1-201ENST00000299084 PRPF4BQ13523 1007 aaKnown RBP16.55■□□□□ 0.24
SPRED1-201ENST00000299084 AAMPQ13685 434 aa16.55■□□□□ 0.24
SPRED1-201ENST00000299084 CCDC12Q8WUD4 166 aaPredicted RBP16.55■□□□□ 0.24
SPRED1-201ENST00000299084 SLC5A1P13866 664 aa16.55■□□□□ 0.24
SPRED1-201ENST00000299084 LMOD1P29536 600 aaPredicted RBP16.55■□□□□ 0.24
SPRED1-201ENST00000299084 TDRD12Q587J7 1177 aaKnown RBP16.55■□□□□ 0.24
SPRED1-201ENST00000299084 CLGNO14967 610 aa16.55■□□□□ 0.24
SPRED1-201ENST00000299084 SATB1Q01826 763 aa16.55■□□□□ 0.24
SPRED1-201ENST00000299084 TCERG1LQ5VWI1 586 aa16.55■□□□□ 0.24
SPRED1-201ENST00000299084 USP37Q86T82 979 aa16.55■□□□□ 0.24
SPRED1-201ENST00000299084 BBXQ8WY36 941 aaPredicted RBP16.55■□□□□ 0.24
SPRED1-201ENST00000299084 PTPRGP23470 1445 aa16.55■□□□□ 0.24
SPRED1-201ENST00000299084 RAD54L2Q9Y4B4 1467 aa16.55■□□□□ 0.24
SPRED1-201ENST00000299084 DNA2P51530 1060 aa16.55■□□□□ 0.24
SPRED1-201ENST00000299084 GBP3Q9H0R5 595 aa16.55■□□□□ 0.24
SPRED1-201ENST00000299084 TPD52P55327 224 aaPredicted RBP16.54■□□□□ 0.24
SPRED1-201ENST00000299084 CFAP100Q494V2 611 aa16.54■□□□□ 0.24
SPRED1-201ENST00000299084 TBC1D5Q92609 795 aa16.54■□□□□ 0.24
SPRED1-201ENST00000299084 ATAD2BQ9ULI0 1458 aa16.54■□□□□ 0.24
SPRED1-201ENST00000299084 AMPD3Q01432 767 aa16.54■□□□□ 0.24
SPRED1-201ENST00000299084 SRCIN1Q9C0H9 1055 aa16.54■□□□□ 0.24
SPRED1-201ENST00000299084 A0A1W2PRG0 241 aa16.54■□□□□ 0.24
SPRED1-201ENST00000299084 NAP1L3Q99457 506 aaPredicted RBP16.54■□□□□ 0.24
SPRED1-201ENST00000299084 ANAPC4Q9UJX5 808 aa16.54■□□□□ 0.24
SPRED1-201ENST00000299084 RFC4P35249 363 aa16.54■□□□□ 0.24
SPRED1-201ENST00000299084 MAP3K12Q12852 859 aa16.54■□□□□ 0.24
SPRED1-201ENST00000299084 CFAP58Q5T655 872 aa16.54■□□□□ 0.24
SPRED1-201ENST00000299084 IQCGQ9H095 443 aaKnown RBP16.54■□□□□ 0.24
SPRED1-201ENST00000299084 PAFAH1B1P43034 410 aa16.54■□□□□ 0.24
SPRED1-201ENST00000299084 U3KPZ7 1027 aaPredicted RBP16.54■□□□□ 0.24
SPRED1-201ENST00000299084 SLC4A2P04920 1241 aa16.53■□□□□ 0.24
SPRED1-201ENST00000299084 OGFOD1Q8N543 542 aa16.53■□□□□ 0.24
SPRED1-201ENST00000299084 SIRT1Q96EB6 747 aa16.53■□□□□ 0.24
SPRED1-201ENST00000299084 GMNNO75496 209 aa16.53■□□□□ 0.24
SPRED1-201ENST00000299084 CASQ1P31415 396 aa16.53■□□□□ 0.24
SPRED1-201ENST00000299084 KLHL10Q6JEL2 608 aa16.53■□□□□ 0.24
SPRED1-201ENST00000299084 MKRN1Q9UHC7 482 aaKnown RBP16.53■□□□□ 0.24
SPRED1-201ENST00000299084 POLD1P28340 1107 aa16.53■□□□□ 0.24
SPRED1-201ENST00000299084 CATIPQ7Z7H3 387 aa16.53■□□□□ 0.24
SPRED1-201ENST00000299084 NAA15Q9BXJ9 866 aaKnown RBP16.53■□□□□ 0.24
SPRED1-201ENST00000299084 BAG3O95817 575 aa16.53■□□□□ 0.24
SPRED1-201ENST00000299084 KIF5CO60282 957 aa16.52■□□□□ 0.24
SPRED1-201ENST00000299084 PLVAPQ9BX97 442 aa16.52■□□□□ 0.24
SPRED1-201ENST00000299084 WDR33Q9C0J8 1336 aaKnown RBP16.52■□□□□ 0.24
SPRED1-201ENST00000299084 CCDC172P0C7W6 258 aa16.52■□□□□ 0.24
SPRED1-201ENST00000299084 KIF5AQ12840 1032 aa16.52■□□□□ 0.24
SPRED1-201ENST00000299084 EP400NLQ6ZTU2 488 aa16.52■□□□□ 0.24
SPRED1-201ENST00000299084 MICALCLQ6ZW33 695 aa16.52■□□□□ 0.24
SPRED1-201ENST00000299084 USP47Q96K76 1375 aa16.52■□□□□ 0.23
SPRED1-201ENST00000299084 CUL4BQ13620 913 aa16.52■□□□□ 0.23
SPRED1-201ENST00000299084 CIZ1Q9ULV3 898 aaPredicted RBP16.52■□□□□ 0.23
SPRED1-201ENST00000299084 CCDC194A0A1B0GVG4 234 aa16.51■□□□□ 0.23
SPRED1-201ENST00000299084 NOD1Q9Y239 953 aa16.51■□□□□ 0.23
SPRED1-201ENST00000299084 FANCD2Q9BXW9 1451 aa16.51■□□□□ 0.23
SPRED1-201ENST00000299084 DPH6Q7L8W6 267 aa16.51■□□□□ 0.23
SPRED1-201ENST00000299084 TRERF1Q96PN7 1200 aa16.51■□□□□ 0.23
SPRED1-201ENST00000299084 MXRA7P84157 204 aa16.51■□□□□ 0.23
SPRED1-201ENST00000299084 UBXN4Q92575 508 aa16.51■□□□□ 0.23
SPRED1-201ENST00000299084 PRKCSHP14314 528 aaPredicted RBP16.51■□□□□ 0.23
SPRED1-201ENST00000299084 POGZQ7Z3K3 1410 aa16.51■□□□□ 0.23
SPRED1-201ENST00000299084 DDX46Q7L014 1031 aaKnown RBP16.51■□□□□ 0.23
SPRED1-201ENST00000299084 HLTFQ14527 1009 aaKnown RBP eCLIP16.5■□□□□ 0.232e-6■■□□□ 11.7
SPRED1-201ENST00000299084 ATP2B3Q16720 1220 aa16.5■□□□□ 0.23
SPRED1-201ENST00000299084 CPLX3Q8WVH0 158 aa16.5■□□□□ 0.23
SPRED1-201ENST00000299084 CCT6BQ92526 530 aa16.5■□□□□ 0.23
SPRED1-201ENST00000299084 PDRG1Q9NUG6 133 aa16.5■□□□□ 0.23
SPRED1-201ENST00000299084 TWISTNBQ3B726 338 aaPredicted RBP16.5■□□□□ 0.23
SPRED1-201ENST00000299084 CCDC144CPQ8IYA2 1237 aa16.5■□□□□ 0.23
SPRED1-201ENST00000299084 NUP88Q99567 741 aaPredicted RBP16.5■□□□□ 0.23
SPRED1-201ENST00000299084 IMPG2Q9BZV3 1241 aa16.5■□□□□ 0.23
SPRED1-201ENST00000299084 SEPT6Q14141 434 aa16.5■□□□□ 0.23
SPRED1-201ENST00000299084 MMRN2Q9H8L6 949 aa16.5■□□□□ 0.23
SPRED1-201ENST00000299084 CCDC63Q8NA47 563 aa16.5■□□□□ 0.23
SPRED1-201ENST00000299084 RUSC2Q8N2Y8 1516 aa16.5■□□□□ 0.23
SPRED1-201ENST00000299084 PFDN4Q9NQP4 134 aa16.49■□□□□ 0.23
SPRED1-201ENST00000299084 TCP11L1Q9NUJ3 509 aa16.49■□□□□ 0.23
SPRED1-201ENST00000299084 SPECC1LQ69YQ0 1117 aa16.49■□□□□ 0.23
SPRED1-201ENST00000299084 CNTLNQ9NXG0 1405 aa16.49■□□□□ 0.23
SPRED1-201ENST00000299084 FILIP1Q7Z7B0 1213 aa16.49■□□□□ 0.23
SPRED1-201ENST00000299084 KIAA1524Q8TCG1 905 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms