RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 COL18A1P39060 1754 aa24.24■■□□□ 1.47
NFIL3-201ENST00000297689 OVOS2A0A0G2JMS6 1433 aa24.23■■□□□ 1.47
NFIL3-201ENST00000297689 KCNQ3O43525 872 aa24.23■■□□□ 1.47
NFIL3-201ENST00000297689 TSHZ3Q63HK5 1081 aa24.23■■□□□ 1.47
NFIL3-201ENST00000297689 CHMP4AQ9BY43 222 aa24.23■■□□□ 1.47
NFIL3-201ENST00000297689 BEND3Q5T5X7 828 aa24.23■■□□□ 1.47
NFIL3-201ENST00000297689 HEG1Q9ULI3 1381 aa24.22■■□□□ 1.47
NFIL3-201ENST00000297689 CRYBG1Q9Y4K1 1723 aa24.22■■□□□ 1.47
NFIL3-201ENST00000297689 ST18O60284 1047 aa24.22■■□□□ 1.47
NFIL3-201ENST00000297689 CHMLP26374 656 aa24.22■■□□□ 1.47
NFIL3-201ENST00000297689 AMOTQ4VCS5 1084 aa24.22■■□□□ 1.47
NFIL3-201ENST00000297689 ERBB3P21860 1342 aa24.21■■□□□ 1.47
NFIL3-201ENST00000297689 NPHP3Q7Z494 1330 aa24.21■■□□□ 1.47
NFIL3-201ENST00000297689 CWC22Q9HCG8 908 aaKnown RBP24.21■■□□□ 1.47
NFIL3-201ENST00000297689 CHPF2Q9P2E5 772 aa24.21■■□□□ 1.47
NFIL3-201ENST00000297689 TNS3Q68CZ2 1445 aa24.21■■□□□ 1.47
NFIL3-201ENST00000297689 RAB11FIP3O75154 756 aa24.2■■□□□ 1.47
NFIL3-201ENST00000297689 BAG4O95429 457 aaKnown RBP24.2■■□□□ 1.46
NFIL3-201ENST00000297689 MPRIPQ6WCQ1 1025 aa24.2■■□□□ 1.46
NFIL3-201ENST00000297689 PPP1R42Q7Z4L9 355 aa24.2■■□□□ 1.46
NFIL3-201ENST00000297689 FAM43AQ8N2R8 423 aa24.2■■□□□ 1.46
NFIL3-201ENST00000297689 EIF2S2P20042 333 aaKnown RBP24.19■■□□□ 1.46
NFIL3-201ENST00000297689 MRE11P49959 708 aa24.19■■□□□ 1.46
NFIL3-201ENST00000297689 NUCB2P80303 420 aa24.19■■□□□ 1.46
NFIL3-201ENST00000297689 CABLES1Q8TDN4 633 aa24.19■■□□□ 1.46
NFIL3-201ENST00000297689 DNAAF4Q8WXU2 420 aa24.19■■□□□ 1.46
NFIL3-201ENST00000297689 ADCY9O60503 1353 aa24.19■■□□□ 1.46
NFIL3-201ENST00000297689 RNMTO43148 476 aaKnown RBP24.19■■□□□ 1.46
NFIL3-201ENST00000297689 NBPF7P0C2Y1 421 aaPredicted RBP24.18■■□□□ 1.46
NFIL3-201ENST00000297689 UNC5CLQ8IV45 518 aa24.18■■□□□ 1.46
NFIL3-201ENST00000297689 ADAMTS7Q9UKP4 1686 aa24.18■■□□□ 1.46
NFIL3-201ENST00000297689 PI4KAP2A4QPH2 592 aa24.17■■□□□ 1.46
NFIL3-201ENST00000297689 BTBD11A6QL63 1104 aa24.17■■□□□ 1.46
NFIL3-201ENST00000297689 EPB41L2O43491 1005 aaKnown RBP24.17■■□□□ 1.46
NFIL3-201ENST00000297689 TEFQ10587 303 aa24.17■■□□□ 1.46
NFIL3-201ENST00000297689 PI4KAP1Q8N8J0 262 aa24.17■■□□□ 1.46
NFIL3-201ENST00000297689 SPATA31A3Q5VYP0 1347 aa24.17■■□□□ 1.46
NFIL3-201ENST00000297689 ANAPC15P60006 121 aa24.17■■□□□ 1.46
NFIL3-201ENST00000297689 AK9Q5TCS8 1911 aa24.16■■□□□ 1.46
NFIL3-201ENST00000297689 SLAIN2Q9P270 581 aa24.16■■□□□ 1.46
NFIL3-201ENST00000297689 SIPA1L3O60292 1781 aaPredicted RBP24.16■■□□□ 1.46
NFIL3-201ENST00000297689 PANK2Q9BZ23 570 aa24.15■■□□□ 1.46
NFIL3-201ENST00000297689 MTX1Q13505 466 aa24.15■■□□□ 1.46
NFIL3-201ENST00000297689 BRINP3Q76B58 766 aa24.15■■□□□ 1.46
NFIL3-201ENST00000297689 RHPN1Q8TCX5 695 aa24.15■■□□□ 1.46
NFIL3-201ENST00000297689 C1orf141Q5JVX7 400 aa24.14■■□□□ 1.46
NFIL3-201ENST00000297689 ZGPATQ8N5A5 531 aaKnown RBP24.14■■□□□ 1.46
NFIL3-201ENST00000297689 PI4K2BQ8TCG2 481 aa24.14■■□□□ 1.46
NFIL3-201ENST00000297689 IL1RAPL2Q9NP60 686 aa24.14■■□□□ 1.46
NFIL3-201ENST00000297689 GIGYF1O75420 1035 aaPredicted RBP24.14■■□□□ 1.45
NFIL3-201ENST00000297689 SURF6O75683 361 aaKnown RBP24.14■■□□□ 1.45
NFIL3-201ENST00000297689 GAS2L3Q86XJ1 694 aa24.14■■□□□ 1.45
NFIL3-201ENST00000297689 GRPEL1Q9HAV7 217 aa24.14■■□□□ 1.45
NFIL3-201ENST00000297689 DBF4Q9UBU7 674 aaPredicted RBP24.14■■□□□ 1.45
NFIL3-201ENST00000297689 PKP1Q13835 747 aa24.13■■□□□ 1.45
NFIL3-201ENST00000297689 LTBP4Q8N2S1 1624 aa24.13■■□□□ 1.45
NFIL3-201ENST00000297689 PALD1Q9ULE6 856 aa24.13■■□□□ 1.45
NFIL3-201ENST00000297689 ZDHHC9Q9Y397 364 aa24.13■■□□□ 1.45
NFIL3-201ENST00000297689 KLHL40Q2TBA0 621 aa24.12■■□□□ 1.45
NFIL3-201ENST00000297689 RILPL2Q969X0 211 aa24.12■■□□□ 1.45
NFIL3-201ENST00000297689 KIF1BPQ96EK5 621 aa24.12■■□□□ 1.45
NFIL3-201ENST00000297689 TRIM6-TRIM34B2RNG4 842 aa24.12■■□□□ 1.45
NFIL3-201ENST00000297689 SRGAP3O43295 1099 aa24.12■■□□□ 1.45
NFIL3-201ENST00000297689 USP42Q9H9J4 1324 aaKnown RBP24.11■■□□□ 1.45
NFIL3-201ENST00000297689 GOLGA6L22H0YM25 854 aa24.11■■□□□ 1.45
NFIL3-201ENST00000297689 ANXA1P04083 346 aa24.11■■□□□ 1.45
NFIL3-201ENST00000297689 MCM2P49736 904 aa24.11■■□□□ 1.45
NFIL3-201ENST00000297689 CUL4AQ13619 759 aa24.11■■□□□ 1.45
NFIL3-201ENST00000297689 CHRNA2Q15822 529 aa24.11■■□□□ 1.45
NFIL3-201ENST00000297689 IL25Q9H293 177 aa24.11■■□□□ 1.45
NFIL3-201ENST00000297689 NEK4P51957 841 aa24.11■■□□□ 1.45
NFIL3-201ENST00000297689 NLRP2Q9NX02 1062 aa24.11■■□□□ 1.45
NFIL3-201ENST00000297689 NUTM1Q86Y26 1132 aa24.1■■□□□ 1.45
NFIL3-201ENST00000297689 ABCC6O95255 1503 aa24.1■■□□□ 1.45
NFIL3-201ENST00000297689 ALDH1L1O75891 902 aa24.09■■□□□ 1.45
NFIL3-201ENST00000297689 TMX3Q96JJ7 454 aa24.09■■□□□ 1.45
NFIL3-201ENST00000297689 MEGF6O75095 1541 aa24.09■■□□□ 1.45
NFIL3-201ENST00000297689 LMBRD1Q9NUN5 540 aa24.09■■□□□ 1.45
NFIL3-201ENST00000297689 MCCP23508 829 aa24.08■■□□□ 1.45
NFIL3-201ENST00000297689 ANO2Q9NQ90 1003 aa24.08■■□□□ 1.45
NFIL3-201ENST00000297689 PROSER3Q2NL68 480 aa24.07■■□□□ 1.44
NFIL3-201ENST00000297689 HSP90AB4PQ58FF6 505 aa24.07■■□□□ 1.44
NFIL3-201ENST00000297689 CPDO75976 1380 aa24.07■■□□□ 1.44
NFIL3-201ENST00000297689 KSR2Q6VAB6 950 aa24.07■■□□□ 1.44
NFIL3-201ENST00000297689 ARXQ96QS3 562 aa24.07■■□□□ 1.44
NFIL3-201ENST00000297689 SCN11AQ9UI33 1791 aa24.06■■□□□ 1.44
NFIL3-201ENST00000297689 HSPA4P34932 840 aa24.06■■□□□ 1.44
NFIL3-201ENST00000297689 RAPGEF4Q8WZA2 1011 aa24.06■■□□□ 1.44
NFIL3-201ENST00000297689 MAP3K2Q9Y2U5 619 aa24.05■■□□□ 1.44
NFIL3-201ENST00000297689 KDM6AO15550 1401 aaPredicted RBP24.05■■□□□ 1.44
NFIL3-201ENST00000297689 SGSM2O43147 1006 aa24.04■■□□□ 1.44
NFIL3-201ENST00000297689 INTS4Q96HW7 963 aaKnown RBP24.04■■□□□ 1.44
NFIL3-201ENST00000297689 UTYO14607 1347 aa24.04■■□□□ 1.44
NFIL3-201ENST00000297689 PRAMEF22A3QJZ6 481 aa24.04■■□□□ 1.44
NFIL3-201ENST00000297689 RRAGDQ9NQL2 400 aaPredicted RBP24.04■■□□□ 1.44
NFIL3-201ENST00000297689 DDX49Q9Y6V7 483 aaKnown RBP24.04■■□□□ 1.44
NFIL3-201ENST00000297689 SOS2Q07890 1332 aaPredicted RBP24.04■■□□□ 1.44
NFIL3-201ENST00000297689 TATP17735 454 aaPredicted RBP24.03■■□□□ 1.44
NFIL3-201ENST00000297689 MCTP1Q6DN14 999 aa24.03■■□□□ 1.44
NFIL3-201ENST00000297689 TTC41PQ6P2S7 1318 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms