RNA–Protein interactions for RNA: ENST00000296875.3

GDF9-201, Transcript of growth differentiation factor 9, humanhuman

TSL 5 BASIC

Gene GDF9, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-201ENST00000296875 IBTKQ9P2D0 1353 aaPredicted RBP17.88■□□□□ 0.45
GDF9-201ENST00000296875 EPB41L2O43491 1005 aaKnown RBP17.88■□□□□ 0.45
GDF9-201ENST00000296875 PDE1AP54750 535 aa17.88■□□□□ 0.45
GDF9-201ENST00000296875 PRDM11Q9NQV5 511 aa17.88■□□□□ 0.45
GDF9-201ENST00000296875 MCM4P33991 863 aa17.87■□□□□ 0.45
GDF9-201ENST00000296875 RNMTO43148 476 aaKnown RBP17.86■□□□□ 0.45
GDF9-201ENST00000296875 COL14A1Q05707 1796 aaKnown RBP17.86■□□□□ 0.45
GDF9-201ENST00000296875 COL5A2P05997 1499 aaPredicted RBP17.86■□□□□ 0.45
GDF9-201ENST00000296875 MX1P20591 662 aa17.86■□□□□ 0.45
GDF9-201ENST00000296875 DNAAF4Q8WXU2 420 aa17.86■□□□□ 0.45
GDF9-201ENST00000296875 KIF2CQ99661 725 aa17.86■□□□□ 0.45
GDF9-201ENST00000296875 USP26Q9BXU7 913 aa17.86■□□□□ 0.45
GDF9-201ENST00000296875 APBB1O00213 710 aa17.85■□□□□ 0.45
GDF9-201ENST00000296875 C16orf71Q8IYS4 520 aaPredicted RBP17.85■□□□□ 0.45
GDF9-201ENST00000296875 STAP2Q9UGK3 403 aa17.85■□□□□ 0.45
GDF9-201ENST00000296875 LRRFIP2Q9Y608 721 aaKnown RBP17.85■□□□□ 0.45
GDF9-201ENST00000296875 GOLGA6L22H0YM25 854 aa17.84■□□□□ 0.45
GDF9-201ENST00000296875 ALDH1L1O75891 902 aa17.84■□□□□ 0.45
GDF9-201ENST00000296875 DDX58O95786 925 aaKnown RBP17.84■□□□□ 0.45
GDF9-201ENST00000296875 MCM2P49736 904 aa17.84■□□□□ 0.45
GDF9-201ENST00000296875 SKOR2Q2VWA4 1001 aaPredicted RBP17.84■□□□□ 0.45
GDF9-201ENST00000296875 SSH3Q8TE77 659 aa17.84■□□□□ 0.45
GDF9-201ENST00000296875 NECTIN2Q92692 538 aa17.84■□□□□ 0.45
GDF9-201ENST00000296875 USP44Q9H0E7 712 aa17.84■□□□□ 0.45
GDF9-201ENST00000296875 RGS17Q9UGC6 210 aaPredicted RBP17.84■□□□□ 0.45
GDF9-201ENST00000296875 SMARCA5O60264 1052 aaPredicted RBP17.84■□□□□ 0.45
GDF9-201ENST00000296875 EIF2S2P20042 333 aaKnown RBP17.84■□□□□ 0.45
GDF9-201ENST00000296875 DDIT3P35638 169 aa17.84■□□□□ 0.45
GDF9-201ENST00000296875 SPRYD3Q8NCJ5 442 aa17.84■□□□□ 0.45
GDF9-201ENST00000296875 RAPGEF4Q8WZA2 1011 aa17.84■□□□□ 0.45
GDF9-201ENST00000296875 CWC22Q9HCG8 908 aaKnown RBP17.84■□□□□ 0.45
GDF9-201ENST00000296875 HYPKQ9NX55 129 aa17.84■□□□□ 0.45
GDF9-201ENST00000296875 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.84■□□□□ 0.45
GDF9-201ENST00000296875 ISY1Q9ULR0 285 aaKnown RBP17.84■□□□□ 0.45
GDF9-201ENST00000296875 SPG7Q9UQ90 795 aa17.83■□□□□ 0.44
GDF9-201ENST00000296875 EXOC6BQ9Y2D4 811 aa17.83■□□□□ 0.44
GDF9-201ENST00000296875 KIF1BPQ96EK5 621 aa17.82■□□□□ 0.44
GDF9-201ENST00000296875 LGR6Q9HBX8 967 aa17.82■□□□□ 0.44
GDF9-201ENST00000296875 CHPF2Q9P2E5 772 aa17.81■□□□□ 0.44
GDF9-201ENST00000296875 PLCH1Q4KWH8 1693 aa17.81■□□□□ 0.44
GDF9-201ENST00000296875 ANAPC15P60006 121 aa17.81■□□□□ 0.44
GDF9-201ENST00000296875 NUCB2P80303 420 aa17.81■□□□□ 0.44
GDF9-201ENST00000296875 POLA2Q14181 598 aa17.81■□□□□ 0.44
GDF9-201ENST00000296875 RAB3GAP1Q15042 981 aa17.81■□□□□ 0.44
GDF9-201ENST00000296875 WDR17Q8IZU2 1322 aa17.81■□□□□ 0.44
GDF9-201ENST00000296875 SALL3Q9BXA9 1300 aa17.81■□□□□ 0.44
GDF9-201ENST00000296875 JCADQ9P266 1359 aa17.8■□□□□ 0.44
GDF9-201ENST00000296875 ADAMTS7Q9UKP4 1686 aa17.8■□□□□ 0.44
GDF9-201ENST00000296875 TATP17735 454 aaPredicted RBP17.8■□□□□ 0.44
GDF9-201ENST00000296875 BEND3Q5T5X7 828 aa17.8■□□□□ 0.44
GDF9-201ENST00000296875 MPRIPQ6WCQ1 1025 aa17.8■□□□□ 0.44
GDF9-201ENST00000296875 ERC1Q8IUD2 1116 aa17.8■□□□□ 0.44
GDF9-201ENST00000296875 OTUD7AQ8TE49 926 aaPredicted RBP17.8■□□□□ 0.44
GDF9-201ENST00000296875 PNMA6EA0A0J9YXQ4 647 aa17.79■□□□□ 0.44
GDF9-201ENST00000296875 PHAXQ9H814 394 aaKnown RBP17.79■□□□□ 0.44
GDF9-201ENST00000296875 NRAPQ86VF7 1730 aa17.79■□□□□ 0.44
GDF9-201ENST00000296875 HEG1Q9ULI3 1381 aa17.79■□□□□ 0.44
GDF9-201ENST00000296875 GPATCH3Q96I76 525 aa17.79■□□□□ 0.44
GDF9-201ENST00000296875 NLRP2Q9NX02 1062 aa17.79■□□□□ 0.44
GDF9-201ENST00000296875 PI4KAP2A4QPH2 592 aa17.78■□□□□ 0.44
GDF9-201ENST00000296875 GIGYF1O75420 1035 aaPredicted RBP17.78■□□□□ 0.44
GDF9-201ENST00000296875 KSR2Q6VAB6 950 aa17.78■□□□□ 0.44
GDF9-201ENST00000296875 PI4KAP1Q8N8J0 262 aa17.78■□□□□ 0.44
GDF9-201ENST00000296875 MEGF6O75095 1541 aa17.78■□□□□ 0.44
GDF9-201ENST00000296875 TRIM6-TRIM34B2RNG4 842 aa17.77■□□□□ 0.44
GDF9-201ENST00000296875 SRGAP3O43295 1099 aa17.77■□□□□ 0.44
GDF9-201ENST00000296875 SURF6O75683 361 aaKnown RBP17.77■□□□□ 0.44
GDF9-201ENST00000296875 MTX1Q13505 466 aa17.77■□□□□ 0.44
GDF9-201ENST00000296875 PPP1R42Q7Z4L9 355 aa17.77■□□□□ 0.44
GDF9-201ENST00000296875 ESYT1Q9BSJ8 1104 aa17.77■□□□□ 0.44
GDF9-201ENST00000296875 PKD1L3Q7Z443 1732 aa17.77■□□□□ 0.44
GDF9-201ENST00000296875 SIPA1L3O60292 1781 aaPredicted RBP17.76■□□□□ 0.43
GDF9-201ENST00000296875 NWD2Q9ULI1 1742 aa17.76■□□□□ 0.43
GDF9-201ENST00000296875 TRAK2O60296 914 aa17.76■□□□□ 0.43
GDF9-201ENST00000296875 CSB-PGBD3P0DP91 1061 aa17.76■□□□□ 0.43
GDF9-201ENST00000296875 BTG4Q9NY30 223 aa17.76■□□□□ 0.43
GDF9-201ENST00000296875 C9orf78Q9NZ63 289 aaPredicted RBP17.76■□□□□ 0.43
GDF9-201ENST00000296875 TTC41PQ6P2S7 1318 aa17.76■□□□□ 0.43
GDF9-201ENST00000296875 LARP1Q6PKG0 1096 aaKnown RBP17.76■□□□□ 0.43
GDF9-201ENST00000296875 CLEC17AQ6ZS10 378 aa17.76■□□□□ 0.43
GDF9-201ENST00000296875 DDX21Q9NR30 783 aaKnown RBP eCLIP17.76■□□□□ 0.43
GDF9-201ENST00000296875 ADAMTS2O95450 1211 aa17.75■□□□□ 0.43
GDF9-201ENST00000296875 CNTROBQ8N137 903 aa17.75■□□□□ 0.43
GDF9-201ENST00000296875 CARD10Q9BWT7 1032 aa17.75■□□□□ 0.43
GDF9-201ENST00000296875 NEXNQ0ZGT2 675 aa17.74■□□□□ 0.43
GDF9-201ENST00000296875 OS9Q13438 667 aaPredicted RBP17.74■□□□□ 0.43
GDF9-201ENST00000296875 IFNL2Q8IZJ0 200 aa17.74■□□□□ 0.43
GDF9-201ENST00000296875 LINS1Q8NG48 757 aa17.74■□□□□ 0.43
GDF9-201ENST00000296875 RHPN1Q8TCX5 695 aa17.74■□□□□ 0.43
GDF9-201ENST00000296875 TNPO1Q92973 898 aaKnown RBP17.74■□□□□ 0.43
GDF9-201ENST00000296875 RILPL2Q969X0 211 aa17.74■□□□□ 0.43
GDF9-201ENST00000296875 LRP6O75581 1613 aa17.74■□□□□ 0.43
GDF9-201ENST00000296875 SLIT2O94813 1529 aa17.74■□□□□ 0.43
GDF9-201ENST00000296875 ADCY9O60503 1353 aa17.74■□□□□ 0.43
GDF9-201ENST00000296875 GOLGA6L3A6NEY3 463 aa17.74■□□□□ 0.43
GDF9-201ENST00000296875 NUTM2BA6NNL0 878 aaPredicted RBP17.74■□□□□ 0.43
GDF9-201ENST00000296875 NUTM2EB1AL46 878 aaPredicted RBP17.74■□□□□ 0.43
GDF9-201ENST00000296875 NUTM2AQ8IVF1 878 aaPredicted RBP17.74■□□□□ 0.43
GDF9-201ENST00000296875 PARP4Q9UKK3 1724 aaKnown RBP17.73■□□□□ 0.43
GDF9-201ENST00000296875 CHMLP26374 656 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms