RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 MAP7D2Q96T17 732 aa17.91■□□□□ 0.46
CCT3-201ENST00000295688 LETM1O95202 739 aaPredicted RBP17.91■□□□□ 0.46
CCT3-201ENST00000295688 POLA2Q14181 598 aa17.91■□□□□ 0.46
CCT3-201ENST00000295688 HSP90AB4PQ58FF6 505 aa17.91■□□□□ 0.46
CCT3-201ENST00000295688 KIF1BPQ96EK5 621 aa17.9■□□□□ 0.46
CCT3-201ENST00000295688 AMOTL2Q9Y2J4 779 aa17.9■□□□□ 0.46
CCT3-201ENST00000295688 TBX22Q9Y458 520 aa17.9■□□□□ 0.46
CCT3-201ENST00000295688 PIK3C2AO00443 1686 aa17.9■□□□□ 0.46
CCT3-201ENST00000295688 CNTROBQ8N137 903 aa17.9■□□□□ 0.46
CCT3-201ENST00000295688 TMEM87AQ8NBN3 555 aa17.9■□□□□ 0.46
CCT3-201ENST00000295688 IL17REQ8NFR9 667 aa17.9■□□□□ 0.46
CCT3-201ENST00000295688 RAD50Q92878 1312 aa17.89■□□□□ 0.45
CCT3-201ENST00000295688 SURF6O75683 361 aaKnown RBP17.89■□□□□ 0.45
CCT3-201ENST00000295688 HOXC9P31274 260 aa17.89■□□□□ 0.45
CCT3-201ENST00000295688 NLRP6P59044 892 aa17.89■□□□□ 0.45
CCT3-201ENST00000295688 HDGFL1Q5TGJ6 251 aa17.89■□□□□ 0.45
CCT3-201ENST00000295688 UNC5CLQ8IV45 518 aa17.89■□□□□ 0.45
CCT3-201ENST00000295688 UPF3BQ9BZI7 483 aaKnown RBP17.89■□□□□ 0.45
CCT3-201ENST00000295688 DIP2AQ14689 1571 aa17.89■□□□□ 0.45
CCT3-201ENST00000295688 SGSM2O43147 1006 aa17.89■□□□□ 0.45
CCT3-201ENST00000295688 NOL8Q76FK4 1167 aaKnown RBP17.89■□□□□ 0.45
CCT3-201ENST00000295688 RHPN1Q8TCX5 695 aa17.89■□□□□ 0.45
CCT3-201ENST00000295688 NECTIN2Q92692 538 aa17.89■□□□□ 0.45
CCT3-201ENST00000295688 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.89■□□□□ 0.45
CCT3-201ENST00000295688 USP54Q70EL1 1684 aa17.88■□□□□ 0.45
CCT3-201ENST00000295688 ANKARQ7Z5J8 1434 aa17.88■□□□□ 0.45
CCT3-201ENST00000295688 HOXB7P09629 217 aa17.88■□□□□ 0.45
CCT3-201ENST00000295688 PPP1R42Q7Z4L9 355 aa17.88■□□□□ 0.45
CCT3-201ENST00000295688 CHAMP1Q96JM3 812 aa17.88■□□□□ 0.45
CCT3-201ENST00000295688 IL1RAPL2Q9NP60 686 aa17.88■□□□□ 0.45
CCT3-201ENST00000295688 ATP6V1DQ9Y5K8 247 aa17.88■□□□□ 0.45
CCT3-201ENST00000295688 USP48Q86UV5 1035 aa17.87■□□□□ 0.45
CCT3-201ENST00000295688 R3HCC1Q9Y3T6 440 aaKnown RBP17.87■□□□□ 0.45
CCT3-201ENST00000295688 NUTM1Q86Y26 1132 aa17.87■□□□□ 0.45
CCT3-201ENST00000295688 PI4K2BQ8TCG2 481 aa17.87■□□□□ 0.45
CCT3-201ENST00000295688 SLC26A8Q96RN1 970 aa17.87■□□□□ 0.45
CCT3-201ENST00000295688 RGPD8O14715 1765 aaPredicted RBP17.87■□□□□ 0.45
CCT3-201ENST00000295688 NWD1Q149M9 1564 aa17.86■□□□□ 0.45
CCT3-201ENST00000295688 PTMAP06454 111 aaKnown RBP17.86■□□□□ 0.45
CCT3-201ENST00000295688 CCDC183Q5T5S1 534 aa17.86■□□□□ 0.45
CCT3-201ENST00000295688 LIMCH1Q9UPQ0 1083 aa17.86■□□□□ 0.45
CCT3-201ENST00000295688 TTC41PQ6P2S7 1318 aa17.85■□□□□ 0.45
CCT3-201ENST00000295688 PLPPR3Q6T4P5 718 aa17.85■□□□□ 0.45
CCT3-201ENST00000295688 RNF214Q8ND24 703 aa17.85■□□□□ 0.45
CCT3-201ENST00000295688 RUFY2Q8WXA3 655 aa17.85■□□□□ 0.45
CCT3-201ENST00000295688 SNX14Q9Y5W7 946 aa17.85■□□□□ 0.45
CCT3-201ENST00000295688 USP42Q9H9J4 1324 aaKnown RBP17.85■□□□□ 0.45
CCT3-201ENST00000295688 SLIT1O75093 1534 aa17.84■□□□□ 0.45
CCT3-201ENST00000295688 ZSCAN22P10073 491 aaPredicted RBP17.84■□□□□ 0.45
CCT3-201ENST00000295688 XPCQ01831 940 aaPredicted RBP17.84■□□□□ 0.45
CCT3-201ENST00000295688 TTC14Q96N46 770 aa17.84■□□□□ 0.45
CCT3-201ENST00000295688 LSG1Q9H089 658 aaKnown RBP17.84■□□□□ 0.45
CCT3-201ENST00000295688 HDAC5Q9UQL6 1122 aa17.84■□□□□ 0.45
CCT3-201ENST00000295688 SRGAP3O43295 1099 aa17.84■□□□□ 0.45
CCT3-201ENST00000295688 RPAP1Q9BWH6 1393 aaPredicted RBP17.83■□□□□ 0.45
CCT3-201ENST00000295688 GLRX3O76003 335 aaKnown RBP17.83■□□□□ 0.45
CCT3-201ENST00000295688 PHAXQ9H814 394 aaKnown RBP17.83■□□□□ 0.45
CCT3-201ENST00000295688 ARHGAP23Q9P227 1491 aa17.83■□□□□ 0.45
CCT3-201ENST00000295688 GADD45BO75293 160 aaPredicted RBP17.83■□□□□ 0.44
CCT3-201ENST00000295688 UBE2HP62256 183 aa17.83■□□□□ 0.44
CCT3-201ENST00000295688 MTERF4Q7Z6M4 381 aaKnown RBP17.83■□□□□ 0.44
CCT3-201ENST00000295688 PDIA4P13667 645 aaKnown RBP17.82■□□□□ 0.44
CCT3-201ENST00000295688 KIAA2012Q0VF49 1180 aa17.82■□□□□ 0.44
CCT3-201ENST00000295688 DNAAF4Q8WXU2 420 aa17.82■□□□□ 0.44
CCT3-201ENST00000295688 ZSCAN31Q96LW9 406 aaPredicted RBP17.82■□□□□ 0.44
CCT3-201ENST00000295688 SMC3Q9UQE7 1217 aa17.82■□□□□ 0.44
CCT3-201ENST00000295688 CEMIPQ8WUJ3 1361 aa17.82■□□□□ 0.44
CCT3-201ENST00000295688 TCHHQ07283 1943 aa17.82■□□□□ 0.44
CCT3-201ENST00000295688 CRYBG1Q9Y4K1 1723 aa17.82■□□□□ 0.44
CCT3-201ENST00000295688 DYNC1I1O14576 645 aa17.81■□□□□ 0.44
CCT3-201ENST00000295688 STX6O43752 255 aa17.81■□□□□ 0.44
CCT3-201ENST00000295688 SASS6Q6UVJ0 657 aa17.81■□□□□ 0.44
CCT3-201ENST00000295688 IL25Q9H293 177 aa17.81■□□□□ 0.44
CCT3-201ENST00000295688 AK2P54819 239 aa17.81■□□□□ 0.44
CCT3-201ENST00000295688 MARF1Q9Y4F3 1742 aaKnown RBP17.81■□□□□ 0.44
CCT3-201ENST00000295688 BEND3Q5T5X7 828 aa17.8■□□□□ 0.44
CCT3-201ENST00000295688 GPATCH3Q96I76 525 aa17.8■□□□□ 0.44
CCT3-201ENST00000295688 TM6SF1Q9BZW5 370 aa17.8■□□□□ 0.44
CCT3-201ENST00000295688 EIF4A1P60842 406 aaKnown RBP17.8■□□□□ 0.44
CCT3-201ENST00000295688 ERC1Q8IUD2 1116 aa17.8■□□□□ 0.44
CCT3-201ENST00000295688 GDPD2Q9HCC8 539 aa17.8■□□□□ 0.44
CCT3-201ENST00000295688 SH2B1Q9NRF2 756 aaPredicted RBP17.8■□□□□ 0.44
CCT3-201ENST00000295688 DIAPH3Q9NSV4 1193 aa17.8■□□□□ 0.44
CCT3-201ENST00000295688 UQCRHLA0A096LP55 91 aa17.79■□□□□ 0.44
CCT3-201ENST00000295688 MAP4K4O95819 1239 aaPredicted RBP17.79■□□□□ 0.44
CCT3-201ENST00000295688 F13A1P00488 732 aa17.79■□□□□ 0.44
CCT3-201ENST00000295688 UQCRHP07919 91 aa17.79■□□□□ 0.44
CCT3-201ENST00000295688 SYT1P21579 422 aa17.79■□□□□ 0.44
CCT3-201ENST00000295688 MTX1Q13505 466 aa17.79■□□□□ 0.44
CCT3-201ENST00000295688 CLASRPQ8N2M8 674 aaKnown RBP17.79■□□□□ 0.44
CCT3-201ENST00000295688 ABTB2Q8N961 1025 aa17.79■□□□□ 0.44
CCT3-201ENST00000295688 MED1Q15648 1581 aaPredicted RBP17.79■□□□□ 0.44
CCT3-201ENST00000295688 EIF2S2P20042 333 aaKnown RBP17.79■□□□□ 0.44
CCT3-201ENST00000295688 OS9Q13438 667 aaPredicted RBP17.79■□□□□ 0.44
CCT3-201ENST00000295688 VPS53Q5VIR6 699 aa17.79■□□□□ 0.44
CCT3-201ENST00000295688 RUFY3Q7L099 469 aa17.79■□□□□ 0.44
CCT3-201ENST00000295688 KIF13AQ9H1H9 1805 aa17.78■□□□□ 0.44
CCT3-201ENST00000295688 KDM3BQ7LBC6 1761 aa17.78■□□□□ 0.44
CCT3-201ENST00000295688 FOXD4L6Q3SYB3 417 aaPredicted RBP17.78■□□□□ 0.44
CCT3-201ENST00000295688 FOXD4L3Q6VB84 417 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms