RNA–Protein interactions for RNA: ENST00000295290.12

PACRGL-201, Transcript of parkin coregulated like, humanhuman

TSL 5 BASIC

Gene PACRGL, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-201ENST00000295290 TRIM27P14373 513 aa28.47■■■□□ 2.15
PACRGL-201ENST00000295290 ATF7IPQ6VMQ6 1270 aa28.47■■■□□ 2.15
PACRGL-201ENST00000295290 G2E3Q7L622 706 aa28.47■■■□□ 2.15
PACRGL-201ENST00000295290 DBF4Q9UBU7 674 aaPredicted RBP28.47■■■□□ 2.15
PACRGL-201ENST00000295290 CACNA1FO60840 1977 aa28.47■■■□□ 2.15
PACRGL-201ENST00000295290 IPO8O15397 1037 aaKnown RBP28.47■■■□□ 2.15
PACRGL-201ENST00000295290 ARHGAP45Q92619 1136 aa28.47■■■□□ 2.15
PACRGL-201ENST00000295290 BCL11BQ9C0K0 894 aaPredicted RBP28.47■■■□□ 2.15
PACRGL-201ENST00000295290 PDIA6Q15084 440 aa28.46■■■□□ 2.15
PACRGL-201ENST00000295290 DNAJC10Q8IXB1 793 aa28.45■■■□□ 2.15
PACRGL-201ENST00000295290 TJP1Q07157 1748 aa28.45■■■□□ 2.15
PACRGL-201ENST00000295290 ANXA1P04083 346 aa28.45■■■□□ 2.14
PACRGL-201ENST00000295290 PDE3AQ14432 1141 aa28.45■■■□□ 2.14
PACRGL-201ENST00000295290 PROSER3Q2NL68 480 aa28.45■■■□□ 2.14
PACRGL-201ENST00000295290 TEX13AQ9BXU3 409 aaPredicted RBP28.45■■■□□ 2.14
PACRGL-201ENST00000295290 LOC102724428A0A0B4J2F2 783 aa28.44■■■□□ 2.14
PACRGL-201ENST00000295290 SIK1P57059 783 aa28.44■■■□□ 2.14
PACRGL-201ENST00000295290 CLUAP1Q96AJ1 413 aa28.43■■■□□ 2.14
PACRGL-201ENST00000295290 PHAXQ9H814 394 aaKnown RBP28.43■■■□□ 2.14
PACRGL-201ENST00000295290 DDX21Q9NR30 783 aaKnown RBP eCLIP28.43■■■□□ 2.14
PACRGL-201ENST00000295290 EP400Q96L91 3159 aa28.43■■■□□ 2.14
PACRGL-201ENST00000295290 RLBP1P12271 317 aa28.43■■■□□ 2.14
PACRGL-201ENST00000295290 FLIIQ13045 1269 aa28.43■■■□□ 2.14
PACRGL-201ENST00000295290 PANK1Q8TE04 598 aa28.43■■■□□ 2.14
PACRGL-201ENST00000295290 CICQ96RK0 1608 aaPredicted RBP28.43■■■□□ 2.14
PACRGL-201ENST00000295290 PTPRCP08575 1304 aa28.43■■■□□ 2.14
PACRGL-201ENST00000295290 TRIM37O94972 964 aa28.41■■■□□ 2.14
PACRGL-201ENST00000295290 ZNF831Q5JPB2 1677 aa28.41■■■□□ 2.14
PACRGL-201ENST00000295290 DZIP1LQ8IYY4 767 aaKnown RBP28.41■■■□□ 2.14
PACRGL-201ENST00000295290 ATP6V1AP38606 617 aa28.4■■■□□ 2.14
PACRGL-201ENST00000295290 PIP4K2AP48426 406 aaPredicted RBP28.4■■■□□ 2.14
PACRGL-201ENST00000295290 ERBB4Q15303 1308 aa28.4■■■□□ 2.14
PACRGL-201ENST00000295290 LRP10Q7Z4F1 713 aa28.39■■■□□ 2.14
PACRGL-201ENST00000295290 API5Q9BZZ5 524 aaKnown RBP28.39■■■□□ 2.14
PACRGL-201ENST00000295290 HYPKQ9NX55 129 aa28.39■■■□□ 2.14
PACRGL-201ENST00000295290 NBPF26B4DH59 902 aa28.39■■■□□ 2.13
PACRGL-201ENST00000295290 STARD3NLO95772 234 aa28.39■■■□□ 2.13
PACRGL-201ENST00000295290 A1BGP04217 495 aa28.39■■■□□ 2.13
PACRGL-201ENST00000295290 CYP19A1P11511 503 aaPredicted RBP28.39■■■□□ 2.13
PACRGL-201ENST00000295290 NBPF14Q5TI25 921 aa28.39■■■□□ 2.13
PACRGL-201ENST00000295290 NBPF10Q6P3W6 841 aaKnown RBP28.39■■■□□ 2.13
PACRGL-201ENST00000295290 NBPF15Q8N660 670 aa28.39■■■□□ 2.13
PACRGL-201ENST00000295290 MS4A1P11836 297 aa28.38■■■□□ 2.13
PACRGL-201ENST00000295290 MYL6BP14649 208 aa28.38■■■□□ 2.13
PACRGL-201ENST00000295290 FTSJ3Q8IY81 847 aaKnown RBP28.38■■■□□ 2.13
PACRGL-201ENST00000295290 CRBNQ96SW2 442 aa28.38■■■□□ 2.13
PACRGL-201ENST00000295290 LY75O60449 1722 aa28.38■■■□□ 2.13
PACRGL-201ENST00000295290 ITPK1Q13572 414 aa28.37■■■□□ 2.13
PACRGL-201ENST00000295290 FKBP5Q13451 457 aaPredicted RBP28.37■■■□□ 2.13
PACRGL-201ENST00000295290 ABCC4O15439 1325 aa28.36■■■□□ 2.13
PACRGL-201ENST00000295290 EXOC6Q8TAG9 804 aa28.35■■■□□ 2.13
PACRGL-201ENST00000295290 COG6Q9Y2V7 657 aa28.35■■■□□ 2.13
PACRGL-201ENST00000295290 COL5A3P25940 1745 aaPredicted RBP28.34■■■□□ 2.13
PACRGL-201ENST00000295290 TMEM57Q8N5G2 664 aa28.33■■■□□ 2.13
PACRGL-201ENST00000295290 F6X3S4 739 aa28.33■■■□□ 2.13
PACRGL-201ENST00000295290 KCNQ4P56696 695 aa28.32■■■□□ 2.12
PACRGL-201ENST00000295290 AIMP1Q12904 312 aaKnown RBP28.31■■■□□ 2.12
PACRGL-201ENST00000295290 ERICH6BQ5W0A0 696 aa28.31■■■□□ 2.12
PACRGL-201ENST00000295290 COPS6Q7L5N1 327 aa28.31■■■□□ 2.12
PACRGL-201ENST00000295290 XAGE3Q8WTP9 111 aa28.31■■■□□ 2.12
PACRGL-201ENST00000295290 MVPQ14764 893 aaKnown RBP28.3■■■□□ 2.12
PACRGL-201ENST00000295290 CCNL1Q9UK58 526 aaPredicted RBP28.3■■■□□ 2.12
PACRGL-201ENST00000295290 ZBTB1Q9Y2K1 713 aa28.3■■■□□ 2.12
PACRGL-201ENST00000295290 ADCY9O60503 1353 aa28.29■■■□□ 2.12
PACRGL-201ENST00000295290 RREB1Q92766 1687 aa28.29■■■□□ 2.12
PACRGL-201ENST00000295290 PI4KAP2A4QPH2 592 aa28.29■■■□□ 2.12
PACRGL-201ENST00000295290 CRKLP46109 303 aaKnown RBP28.29■■■□□ 2.12
PACRGL-201ENST00000295290 PI4KAP1Q8N8J0 262 aa28.29■■■□□ 2.12
PACRGL-201ENST00000295290 LINC00116Q8NCU8 138 aa28.29■■■□□ 2.12
PACRGL-201ENST00000295290 INTS5Q6P9B9 1019 aaKnown RBP28.28■■■□□ 2.12
PACRGL-201ENST00000295290 TNS1Q9HBL0 1735 aaKnown RBP28.28■■■□□ 2.12
PACRGL-201ENST00000295290 ITPRIPQ8IWB1 547 aa28.28■■■□□ 2.12
PACRGL-201ENST00000295290 INTS3Q68E01 1043 aaKnown RBP28.27■■■□□ 2.12
PACRGL-201ENST00000295290 KSR2Q6VAB6 950 aa28.27■■■□□ 2.12
PACRGL-201ENST00000295290 CCDC87Q9NVE4 849 aa28.27■■■□□ 2.12
PACRGL-201ENST00000295290 SLC4A10Q6U841 1118 aa28.26■■■□□ 2.11
PACRGL-201ENST00000295290 MYH14Q7Z406 1995 aaKnown RBP28.26■■■□□ 2.11
PACRGL-201ENST00000295290 DDX58O95786 925 aaKnown RBP28.26■■■□□ 2.11
PACRGL-201ENST00000295290 TAF1LQ8IZX4 1826 aa28.25■■■□□ 2.11
PACRGL-201ENST00000295290 PXDNLA1KZ92 1463 aa28.25■■■□□ 2.11
PACRGL-201ENST00000295290 APBA3O96018 575 aa28.24■■■□□ 2.11
PACRGL-201ENST00000295290 DNAAF4Q8WXU2 420 aa28.24■■■□□ 2.11
PACRGL-201ENST00000295290 LRRC4BQ9NT99 713 aa28.24■■■□□ 2.11
PACRGL-201ENST00000295290 MAP3K2Q9Y2U5 619 aa28.24■■■□□ 2.11
PACRGL-201ENST00000295290 IL6STP40189 918 aaPredicted RBP28.24■■■□□ 2.11
PACRGL-201ENST00000295290 TTLL7Q6ZT98 887 aa28.24■■■□□ 2.11
PACRGL-201ENST00000295290 ANKRD13DQ6ZTN6 518 aa28.24■■■□□ 2.11
PACRGL-201ENST00000295290 DDX19BQ9UMR2 479 aa28.24■■■□□ 2.11
PACRGL-201ENST00000295290 PLSCR1O15162 318 aa28.23■■■□□ 2.11
PACRGL-201ENST00000295290 ZNF330Q9Y3S2 320 aaPredicted RBP28.23■■■□□ 2.11
PACRGL-201ENST00000295290 N4BP2Q86UW6 1770 aaPredicted RBP28.23■■■□□ 2.11
PACRGL-201ENST00000295290 CNTNAP4Q9C0A0 1308 aa28.22■■■□□ 2.11
PACRGL-201ENST00000295290 CCT4P50991 539 aaKnown RBP28.22■■■□□ 2.11
PACRGL-201ENST00000295290 SLC27A3Q5K4L6 730 aa28.22■■■□□ 2.11
PACRGL-201ENST00000295290 RIC3Q7Z5B4 369 aa28.21■■■□□ 2.11
PACRGL-201ENST00000295290 PROM2Q8N271 834 aa28.21■■■□□ 2.11
PACRGL-201ENST00000295290 EIF5P55010 431 aaKnown RBP28.2■■■□□ 2.11
PACRGL-201ENST00000295290 PLBD2Q8NHP8 589 aa28.2■■■□□ 2.11
PACRGL-201ENST00000295290 ARFGEF2Q9Y6D5 1785 aa28.2■■■□□ 2.1
PACRGL-201ENST00000295290 RC3H1Q5TC82 1133 aaKnown RBP28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms