RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 WDR97A6NE52 1622 aa18.72■□□□□ 0.59
SSRP1-202ENST00000293880 GSTTP1A0A1W2PQM5 241 aa18.72■□□□□ 0.59
SSRP1-202ENST00000293880 ADCY5O95622 1261 aa18.72■□□□□ 0.59
SSRP1-202ENST00000293880 THEMISQ8N1K5 641 aaPredicted RBP18.72■□□□□ 0.59
SSRP1-202ENST00000293880 PANK2Q9BZ23 570 aa18.72■□□□□ 0.59
SSRP1-202ENST00000293880 ANO10Q9NW15 660 aa18.72■□□□□ 0.59
SSRP1-202ENST00000293880 LMAN1P49257 510 aa18.72■□□□□ 0.59
SSRP1-202ENST00000293880 METTL24Q5JXM2 366 aa18.72■□□□□ 0.59
SSRP1-202ENST00000293880 CTNNA3Q9UI47 895 aa18.72■□□□□ 0.59
SSRP1-202ENST00000293880 TDRD12Q587J7 1177 aaKnown RBP18.71■□□□□ 0.59
SSRP1-202ENST00000293880 TSG101Q99816 390 aa18.71■□□□□ 0.59
SSRP1-202ENST00000293880 SEC63Q9UGP8 760 aaKnown RBP18.71■□□□□ 0.59
SSRP1-202ENST00000293880 MMRN2Q9H8L6 949 aa18.71■□□□□ 0.59
SSRP1-202ENST00000293880 SPG7Q9UQ90 795 aa18.71■□□□□ 0.59
SSRP1-202ENST00000293880 CTR9Q6PD62 1173 aa18.71■□□□□ 0.59
SSRP1-202ENST00000293880 F6X3S4 739 aa18.71■□□□□ 0.58
SSRP1-202ENST00000293880 GJB2P29033 226 aa18.7■□□□□ 0.58
SSRP1-202ENST00000293880 TFIP11Q9UBB9 837 aaKnown RBP18.7■□□□□ 0.58
SSRP1-202ENST00000293880 MAATS1Q7Z4T9 603 aa18.7■□□□□ 0.58
SSRP1-202ENST00000293880 CIZ1Q9ULV3 898 aaPredicted RBP18.7■□□□□ 0.58
SSRP1-202ENST00000293880 SCLT1Q96NL6 688 aa18.7■□□□□ 0.58
SSRP1-202ENST00000293880 RNF216Q9NWF9 866 aaPredicted RBP18.7■□□□□ 0.58
SSRP1-202ENST00000293880 PRPF4BQ13523 1007 aaKnown RBP18.7■□□□□ 0.58
SSRP1-202ENST00000293880 KRT32Q14532 448 aa18.69■□□□□ 0.58
SSRP1-202ENST00000293880 CFTRP13569 1480 aa18.69■□□□□ 0.58
SSRP1-202ENST00000293880 POLR3DP05423 398 aaPredicted RBP18.69■□□□□ 0.58
SSRP1-202ENST00000293880 CEP126Q9P2H0 1117 aa18.69■□□□□ 0.58
SSRP1-202ENST00000293880 SLFN5Q08AF3 891 aa18.69■□□□□ 0.58
SSRP1-202ENST00000293880 CNNM3Q8NE01 707 aa18.69■□□□□ 0.58
SSRP1-202ENST00000293880 MAP9Q49MG5 647 aa18.69■□□□□ 0.58
SSRP1-202ENST00000293880 C8orf76Q96K31 380 aa18.69■□□□□ 0.58
SSRP1-202ENST00000293880 TBC1D2Q9BYX2 928 aa18.69■□□□□ 0.58
SSRP1-202ENST00000293880 HLTFQ14527 1009 aaKnown RBP eCLIP18.68■□□□□ 0.58
SSRP1-202ENST00000293880 HSP90AA4PQ58FG1 418 aa18.68■□□□□ 0.58
SSRP1-202ENST00000293880 FSIP1Q8NA03 581 aa18.68■□□□□ 0.58
SSRP1-202ENST00000293880 GBP3Q9H0R5 595 aa18.68■□□□□ 0.58
SSRP1-202ENST00000293880 PPM1FP49593 454 aaPredicted RBP18.68■□□□□ 0.58
SSRP1-202ENST00000293880 NSD3Q9BZ95 1437 aa18.68■□□□□ 0.58
SSRP1-202ENST00000293880 SF3B2Q13435 895 aaKnown RBP18.68■□□□□ 0.58
SSRP1-202ENST00000293880 TMCO5BA8MYB1 307 aa18.68■□□□□ 0.58
SSRP1-202ENST00000293880 DESP17661 470 aa18.68■□□□□ 0.58
SSRP1-202ENST00000293880 RANBP6O60518 1105 aaKnown RBP18.67■□□□□ 0.58
SSRP1-202ENST00000293880 IGSF3O75054 1194 aa18.67■□□□□ 0.58
SSRP1-202ENST00000293880 IGHMBP2P38935 993 aaKnown RBP18.67■□□□□ 0.58
SSRP1-202ENST00000293880 DNAAF4Q8WXU2 420 aa18.67■□□□□ 0.58
SSRP1-202ENST00000293880 SSRP1Q08945 709 aaKnown RBP18.67■□□□□ 0.58
SSRP1-202ENST00000293880 LARP1Q6PKG0 1096 aaKnown RBP18.67■□□□□ 0.58
SSRP1-202ENST00000293880 DCAF8L1A6NGE4 600 aa18.67■□□□□ 0.58
SSRP1-202ENST00000293880 ANKRD30BQ9BXX2 1392 aa18.67■□□□□ 0.58
SSRP1-202ENST00000293880 DUSP27Q5VZP5 1158 aa18.66■□□□□ 0.58
SSRP1-202ENST00000293880 CEP135Q66GS9 1140 aa18.66■□□□□ 0.58
SSRP1-202ENST00000293880 ANKLE2Q86XL3 938 aa18.66■□□□□ 0.58
SSRP1-202ENST00000293880 POTEJP0CG39 1038 aa18.66■□□□□ 0.58
SSRP1-202ENST00000293880 RTEL1-TNFRSF6BF6WH68 1400 aa18.66■□□□□ 0.58
SSRP1-202ENST00000293880 GOLGA8BA8MQT2 603 aa18.65■□□□□ 0.58
SSRP1-202ENST00000293880 GNAT3A8MTJ3 354 aa18.65■□□□□ 0.58
SSRP1-202ENST00000293880 GCOM1H8Y6P7 765 aaPredicted RBP18.65■□□□□ 0.58
SSRP1-202ENST00000293880 MYZAPP0CAP1 466 aa18.65■□□□□ 0.58
SSRP1-202ENST00000293880 TMPOP42166 694 aaKnown RBP18.65■□□□□ 0.58
SSRP1-202ENST00000293880 CCDC96Q2M329 555 aa18.65■□□□□ 0.58
SSRP1-202ENST00000293880 MKNK2Q9HBH9 465 aa18.65■□□□□ 0.58
SSRP1-202ENST00000293880 TOPBP1Q92547 1522 aa18.65■□□□□ 0.58
SSRP1-202ENST00000293880 SNW1Q13573 536 aaKnown RBP18.65■□□□□ 0.58
SSRP1-202ENST00000293880 SLC12A7Q9Y666 1083 aa18.65■□□□□ 0.58
SSRP1-202ENST00000293880 CCDC160A6NGH7 325 aa18.65■□□□□ 0.58
SSRP1-202ENST00000293880 PPP1R12BO60237 982 aaPredicted RBP18.64■□□□□ 0.57
SSRP1-202ENST00000293880 MYCNP04198 464 aaPredicted RBP18.64■□□□□ 0.57
SSRP1-202ENST00000293880 IFIT1P09914 478 aaKnown RBP18.64■□□□□ 0.57
SSRP1-202ENST00000293880 TIGD1Q96MW7 591 aa18.64■□□□□ 0.57
SSRP1-202ENST00000293880 GOLGA8AA7E2F4 631 aa18.64■□□□□ 0.57
SSRP1-202ENST00000293880 RAB11FIP3O75154 756 aa18.64■□□□□ 0.57
SSRP1-202ENST00000293880 YEATS4O95619 227 aa18.64■□□□□ 0.57
SSRP1-202ENST00000293880 ZSCAN23Q3MJ62 389 aa18.64■□□□□ 0.57
SSRP1-202ENST00000293880 SMARCC1Q92922 1105 aaPredicted RBP18.64■□□□□ 0.57
SSRP1-202ENST00000293880 NLRP5P59047 1200 aa18.63■□□□□ 0.57
SSRP1-202ENST00000293880 JADE2Q9NQC1 790 aa18.63■□□□□ 0.57
SSRP1-202ENST00000293880 MTIF2P46199 727 aaKnown RBP18.63■□□□□ 0.57
SSRP1-202ENST00000293880 ZNF219Q9P2Y4 722 aaPredicted RBP18.63■□□□□ 0.57
SSRP1-202ENST00000293880 U3KPZ7 1027 aaPredicted RBP18.62■□□□□ 0.57
SSRP1-202ENST00000293880 ZC3H6P61129 1189 aaKnown RBP18.62■□□□□ 0.57
SSRP1-202ENST00000293880 GIMAP6Q6P9H5 292 aa18.62■□□□□ 0.57
SSRP1-202ENST00000293880 VAT1LQ9HCJ6 419 aa18.62■□□□□ 0.57
SSRP1-202ENST00000293880 NFE2L2Q16236 605 aa18.62■□□□□ 0.57
SSRP1-202ENST00000293880 SPECC1Q5M775 1068 aa18.62■□□□□ 0.57
SSRP1-202ENST00000293880 JARID2Q92833 1246 aaPredicted RBP18.62■□□□□ 0.57
SSRP1-202ENST00000293880 NAPBQ9H115 298 aa18.62■□□□□ 0.57
SSRP1-202ENST00000293880 PTCD1O75127 700 aaKnown RBP18.62■□□□□ 0.57
SSRP1-202ENST00000293880 CRACR2BQ8N4Y2 399 aaPredicted RBP18.62■□□□□ 0.57
SSRP1-202ENST00000293880 CTNNA2P26232 953 aa18.62■□□□□ 0.57
SSRP1-202ENST00000293880 HAND2P61296 217 aa18.62■□□□□ 0.57
SSRP1-202ENST00000293880 MYO1BO43795 1136 aa18.61■□□□□ 0.57
SSRP1-202ENST00000293880 PAXIP1Q6ZW49 1069 aaPredicted RBP18.61■□□□□ 0.57
SSRP1-202ENST00000293880 KIF1BPQ96EK5 621 aa18.61■□□□□ 0.57
SSRP1-202ENST00000293880 DRC1Q96MC2 740 aa18.61■□□□□ 0.57
SSRP1-202ENST00000293880 PAIP2Q9BPZ3 127 aaKnown RBP18.61■□□□□ 0.57
SSRP1-202ENST00000293880 SMC1AQ14683 1233 aaKnown RBP18.61■□□□□ 0.57
SSRP1-202ENST00000293880 STX1AQ16623 288 aa18.61■□□□□ 0.57
SSRP1-202ENST00000293880 MICALCLQ6ZW33 695 aa18.61■□□□□ 0.57
SSRP1-202ENST00000293880 CCDC12Q8WUD4 166 aaPredicted RBP18.61■□□□□ 0.57
SSRP1-202ENST00000293880 NOP2P46087 812 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms