RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 SURF6O75683 361 aaKnown RBP24.53■■□□□ 1.52
CXCL16-201ENST00000293778 FOXD4L1Q9NU39 408 aa24.53■■□□□ 1.52
CXCL16-201ENST00000293778 SRGAP3O43295 1099 aa24.52■■□□□ 1.52
CXCL16-201ENST00000293778 AOX1Q06278 1338 aa24.51■■□□□ 1.51
CXCL16-201ENST00000293778 IL1RAPL2Q9NP60 686 aa24.51■■□□□ 1.51
CXCL16-201ENST00000293778 PROSER3Q2NL68 480 aa24.5■■□□□ 1.51
CXCL16-201ENST00000293778 PRAMEF22A3QJZ6 481 aa24.5■■□□□ 1.51
CXCL16-201ENST00000293778 DDX11L8A8MPP1 907 aa24.5■■□□□ 1.51
CXCL16-201ENST00000293778 RAB3GAP1Q15042 981 aa24.5■■□□□ 1.51
CXCL16-201ENST00000293778 TNPO1Q92973 898 aaKnown RBP24.5■■□□□ 1.51
CXCL16-201ENST00000293778 MAP3K2Q9Y2U5 619 aa24.5■■□□□ 1.51
CXCL16-201ENST00000293778 NPHP3Q7Z494 1330 aa24.49■■□□□ 1.51
CXCL16-201ENST00000293778 TRIM6-TRIM34B2RNG4 842 aa24.49■■□□□ 1.51
CXCL16-201ENST00000293778 TATP17735 454 aaPredicted RBP24.49■■□□□ 1.51
CXCL16-201ENST00000293778 KSR2Q6VAB6 950 aa24.49■■□□□ 1.51
CXCL16-201ENST00000293778 CADPS2Q86UW7 1296 aa24.49■■□□□ 1.51
CXCL16-201ENST00000293778 RHPN1Q8TCX5 695 aa24.49■■□□□ 1.51
CXCL16-201ENST00000293778 RILPL2Q969X0 211 aa24.49■■□□□ 1.51
CXCL16-201ENST00000293778 ESYT1Q9BSJ8 1104 aa24.49■■□□□ 1.51
CXCL16-201ENST00000293778 HYPKQ9NX55 129 aa24.49■■□□□ 1.51
CXCL16-201ENST00000293778 ALDH1L1O75891 902 aa24.48■■□□□ 1.51
CXCL16-201ENST00000293778 SPG7Q9UQ90 795 aa24.47■■□□□ 1.51
CXCL16-201ENST00000293778 TNS3Q68CZ2 1445 aa24.47■■□□□ 1.51
CXCL16-201ENST00000293778 NUTM1Q86Y26 1132 aa24.47■■□□□ 1.51
CXCL16-201ENST00000293778 KIF1BPQ96EK5 621 aa24.47■■□□□ 1.51
CXCL16-201ENST00000293778 COL18A1P39060 1754 aa24.47■■□□□ 1.51
CXCL16-201ENST00000293778 ST18O60284 1047 aa24.46■■□□□ 1.51
CXCL16-201ENST00000293778 CHMLP26374 656 aa24.46■■□□□ 1.51
CXCL16-201ENST00000293778 CABLES1Q8TDN4 633 aa24.46■■□□□ 1.51
CXCL16-201ENST00000293778 CSB-PGBD3P0DP91 1061 aa24.46■■□□□ 1.51
CXCL16-201ENST00000293778 GBP4Q96PP9 640 aa24.46■■□□□ 1.51
CXCL16-201ENST00000293778 KDM6AO15550 1401 aaPredicted RBP24.46■■□□□ 1.51
CXCL16-201ENST00000293778 TRAK2O60296 914 aa24.45■■□□□ 1.5
CXCL16-201ENST00000293778 PHKG2P15735 406 aa24.45■■□□□ 1.5
CXCL16-201ENST00000293778 HSP90AB4PQ58FF6 505 aa24.45■■□□□ 1.5
CXCL16-201ENST00000293778 SLC52A2Q9HAB3 445 aa24.45■■□□□ 1.5
CXCL16-201ENST00000293778 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.45■■□□□ 1.5
CXCL16-201ENST00000293778 C9orf78Q9NZ63 289 aaPredicted RBP24.45■■□□□ 1.5
CXCL16-201ENST00000293778 MEGF6O75095 1541 aa24.45■■□□□ 1.5
CXCL16-201ENST00000293778 ZNF790Q6PG37 636 aa24.45■■□□□ 1.5
CXCL16-201ENST00000293778 DDX21Q9NR30 783 aaKnown RBP eCLIP24.45■■□□□ 1.5
CXCL16-201ENST00000293778 SCN11AQ9UI33 1791 aa24.44■■□□□ 1.5
CXCL16-201ENST00000293778 MTX1Q13505 466 aa24.44■■□□□ 1.5
CXCL16-201ENST00000293778 CRYBG1Q9Y4K1 1723 aa24.44■■□□□ 1.5
CXCL16-201ENST00000293778 ABCC6O95255 1503 aa24.44■■□□□ 1.5
CXCL16-201ENST00000293778 UNC5CLQ8IV45 518 aa24.43■■□□□ 1.5
CXCL16-201ENST00000293778 DDX58O95786 925 aaKnown RBP24.43■■□□□ 1.5
CXCL16-201ENST00000293778 SLC39A6Q13433 755 aa24.42■■□□□ 1.5
CXCL16-201ENST00000293778 HDAC5Q9UQL6 1122 aa24.42■■□□□ 1.5
CXCL16-201ENST00000293778 CHRNA2Q15822 529 aa24.42■■□□□ 1.5
CXCL16-201ENST00000293778 CWF19L2Q2TBE0 894 aaKnown RBP24.42■■□□□ 1.5
CXCL16-201ENST00000293778 IFNL2Q8IZJ0 200 aa24.42■■□□□ 1.5
CXCL16-201ENST00000293778 LINS1Q8NG48 757 aa24.41■■□□□ 1.5
CXCL16-201ENST00000293778 SPATA31A3Q5VYP0 1347 aa24.41■■□□□ 1.5
CXCL16-201ENST00000293778 MCCP23508 829 aa24.41■■□□□ 1.5
CXCL16-201ENST00000293778 PDIA6Q15084 440 aa24.41■■□□□ 1.5
CXCL16-201ENST00000293778 NFATC2IPQ8NCF5 419 aa24.41■■□□□ 1.5
CXCL16-201ENST00000293778 PI4K2BQ8TCG2 481 aa24.41■■□□□ 1.5
CXCL16-201ENST00000293778 BRPF3Q9ULD4 1205 aa24.41■■□□□ 1.5
CXCL16-201ENST00000293778 ANO2Q9NQ90 1003 aa24.4■■□□□ 1.5
CXCL16-201ENST00000293778 PLEKHG2Q9H7P9 1386 aa24.39■■□□□ 1.5
CXCL16-201ENST00000293778 AIMP1Q12904 312 aaKnown RBP24.39■■□□□ 1.5
CXCL16-201ENST00000293778 OS9Q13438 667 aaPredicted RBP24.39■■□□□ 1.5
CXCL16-201ENST00000293778 GZF1Q9H116 711 aaPredicted RBP24.39■■□□□ 1.49
CXCL16-201ENST00000293778 C5P01031 1676 aa24.38■■□□□ 1.49
CXCL16-201ENST00000293778 SSFA2P28290 1259 aa24.38■■□□□ 1.49
CXCL16-201ENST00000293778 HSPA2P54652 639 aa24.38■■□□□ 1.49
CXCL16-201ENST00000293778 IL27Q8NEV9 243 aa24.38■■□□□ 1.49
CXCL16-201ENST00000293778 GRM8O00222 908 aa24.37■■□□□ 1.49
CXCL16-201ENST00000293778 L1TD1Q5T7N2 865 aaKnown RBP24.37■■□□□ 1.49
CXCL16-201ENST00000293778 DCAF5Q96JK2 942 aa24.37■■□□□ 1.49
CXCL16-201ENST00000293778 CPDO75976 1380 aa24.36■■□□□ 1.49
CXCL16-201ENST00000293778 PTMSP20962 102 aa24.36■■□□□ 1.49
CXCL16-201ENST00000293778 ANAPC15P60006 121 aa24.36■■□□□ 1.49
CXCL16-201ENST00000293778 UTYO14607 1347 aa24.36■■□□□ 1.49
CXCL16-201ENST00000293778 CYP27B1O15528 508 aa24.35■■□□□ 1.49
CXCL16-201ENST00000293778 MAP4K4O95819 1239 aaPredicted RBP24.35■■□□□ 1.49
CXCL16-201ENST00000293778 RIC3Q7Z5B4 369 aa24.35■■□□□ 1.49
CXCL16-201ENST00000293778 MRC1P22897 1456 aa24.35■■□□□ 1.49
CXCL16-201ENST00000293778 USP42Q9H9J4 1324 aaKnown RBP24.35■■□□□ 1.49
CXCL16-201ENST00000293778 NEK4P51957 841 aa24.35■■□□□ 1.49
CXCL16-201ENST00000293778 ZNF496Q96IT1 587 aaPredicted RBP24.35■■□□□ 1.49
CXCL16-201ENST00000293778 CWC22Q9HCG8 908 aaKnown RBP24.35■■□□□ 1.49
CXCL16-201ENST00000293778 MYL6BP14649 208 aa24.34■■□□□ 1.49
CXCL16-201ENST00000293778 NUCB2P80303 420 aa24.34■■□□□ 1.49
CXCL16-201ENST00000293778 LARP1Q6PKG0 1096 aaKnown RBP24.34■■□□□ 1.49
CXCL16-201ENST00000293778 ERC1Q8IUD2 1116 aa24.34■■□□□ 1.49
CXCL16-201ENST00000293778 CLASRPQ8N2M8 674 aaKnown RBP24.34■■□□□ 1.49
CXCL16-201ENST00000293778 PALD1Q9ULE6 856 aa24.34■■□□□ 1.49
CXCL16-201ENST00000293778 PKD1L3Q7Z443 1732 aa24.34■■□□□ 1.49
CXCL16-201ENST00000293778 TTC41PQ6P2S7 1318 aa24.34■■□□□ 1.49
CXCL16-201ENST00000293778 CLEC17AQ6ZS10 378 aa24.34■■□□□ 1.49
CXCL16-201ENST00000293778 TTC5Q8N0Z6 440 aa24.34■■□□□ 1.49
CXCL16-201ENST00000293778 CNTROBQ8N137 903 aa24.34■■□□□ 1.49
CXCL16-201ENST00000293778 SUCLG2Q96I99 432 aa24.34■■□□□ 1.49
CXCL16-201ENST00000293778 AK9Q5TCS8 1911 aa24.34■■□□□ 1.49
CXCL16-201ENST00000293778 EPB41L2O43491 1005 aaKnown RBP24.33■■□□□ 1.49
CXCL16-201ENST00000293778 PA2G4Q9UQ80 394 aaKnown RBP24.33■■□□□ 1.48
CXCL16-201ENST00000293778 XAGE3Q8WTP9 111 aa24.32■■□□□ 1.48
CXCL16-201ENST00000293778 GOLGA6L3A6NEY3 463 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms