RNA–Protein interactions for RNA: ENST00000293725.9

ZNF563-201, Transcript of zinc finger protein 563, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF563, Length 2,754 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF563-201ENST00000293725 LIMCH1Q9UPQ0 1083 aa18.48■□□□□ 0.55
ZNF563-201ENST00000293725 SNX14Q9Y5W7 946 aa18.48■□□□□ 0.55
ZNF563-201ENST00000293725 PIK3C2BO00750 1634 aa18.48■□□□□ 0.55
ZNF563-201ENST00000293725 TMEM51Q9NW97 253 aa18.47■□□□□ 0.55
ZNF563-201ENST00000293725 MIS18AQ9NYP9 233 aa18.47■□□□□ 0.55
ZNF563-201ENST00000293725 NRBP1Q9UHY1 535 aa18.47■□□□□ 0.55
ZNF563-201ENST00000293725 DDX41Q9UJV9 622 aaKnown RBP18.47■□□□□ 0.55
ZNF563-201ENST00000293725 HECW2Q9P2P5 1572 aa18.47■□□□□ 0.55
ZNF563-201ENST00000293725 CAMK4Q16566 473 aa18.47■□□□□ 0.55
ZNF563-201ENST00000293725 TTC14Q96N46 770 aa18.47■□□□□ 0.55
ZNF563-201ENST00000293725 SIGLEC1Q9BZZ2 1709 aa18.47■□□□□ 0.55
ZNF563-201ENST00000293725 POGZQ7Z3K3 1410 aa18.47■□□□□ 0.55
ZNF563-201ENST00000293725 ZBTB22O15209 634 aa18.47■□□□□ 0.55
ZNF563-201ENST00000293725 CPA1P15085 419 aa18.47■□□□□ 0.55
ZNF563-201ENST00000293725 SYCP1Q15431 976 aa18.47■□□□□ 0.55
ZNF563-201ENST00000293725 CCDC112Q8NEF3 446 aa18.47■□□□□ 0.55
ZNF563-201ENST00000293725 LARGE1O95461 756 aa18.46■□□□□ 0.55
ZNF563-201ENST00000293725 CCDC83Q8IWF9 413 aa18.46■□□□□ 0.55
ZNF563-201ENST00000293725 IL1RAPL2Q9NP60 686 aa18.46■□□□□ 0.55
ZNF563-201ENST00000293725 VPS37CA5D8V6 355 aaPredicted RBP18.46■□□□□ 0.55
ZNF563-201ENST00000293725 GJB2P29033 226 aa18.46■□□□□ 0.55
ZNF563-201ENST00000293725 RASEFQ8IZ41 740 aa18.46■□□□□ 0.55
ZNF563-201ENST00000293725 STAP2Q9UGK3 403 aa18.46■□□□□ 0.55
ZNF563-201ENST00000293725 TUBGCP6Q96RT7 1819 aa18.45■□□□□ 0.54
ZNF563-201ENST00000293725 SLFN14P0C7P3 912 aa18.45■□□□□ 0.54
ZNF563-201ENST00000293725 SULT6B1Q6IMI4 303 aa18.45■□□□□ 0.54
ZNF563-201ENST00000293725 MTMR6Q9Y217 621 aa18.45■□□□□ 0.54
ZNF563-201ENST00000293725 MRVI1Q9Y6F6 885 aa18.45■□□□□ 0.54
ZNF563-201ENST00000293725 TYRO3Q06418 890 aa18.45■□□□□ 0.54
ZNF563-201ENST00000293725 MAP3K11Q16584 847 aa18.45■□□□□ 0.54
ZNF563-201ENST00000293725 ZNF592Q92610 1267 aa18.45■□□□□ 0.54
ZNF563-201ENST00000293725 RAD50Q92878 1312 aa18.45■□□□□ 0.54
ZNF563-201ENST00000293725 NUTM1Q86Y26 1132 aa18.44■□□□□ 0.54
ZNF563-201ENST00000293725 TPD52L1Q16890 204 aaPredicted RBP18.44■□□□□ 0.54
ZNF563-201ENST00000293725 CKAP2LQ8IYA6 745 aa18.44■□□□□ 0.54
ZNF563-201ENST00000293725 TRIM5Q9C035 493 aa18.44■□□□□ 0.54
ZNF563-201ENST00000293725 NUP62CLQ9H1M0 184 aa18.44■□□□□ 0.54
ZNF563-201ENST00000293725 ZSCAN25Q6NSZ9 544 aa18.43■□□□□ 0.54
ZNF563-201ENST00000293725 KIF18AQ8NI77 898 aa18.43■□□□□ 0.54
ZNF563-201ENST00000293725 COG3Q96JB2 828 aa18.43■□□□□ 0.54
ZNF563-201ENST00000293725 MORC2Q9Y6X9 1032 aaPredicted RBP18.43■□□□□ 0.54
ZNF563-201ENST00000293725 CASTP20810 708 aaKnown RBP18.42■□□□□ 0.54
ZNF563-201ENST00000293725 ATP8B2P98198 1209 aa18.42■□□□□ 0.54
ZNF563-201ENST00000293725 WAPLQ7Z5K2 1190 aa18.42■□□□□ 0.54
ZNF563-201ENST00000293725 KLHL34Q8N239 644 aa18.42■□□□□ 0.54
ZNF563-201ENST00000293725 RTF1Q92541 710 aaKnown RBP18.42■□□□□ 0.54
ZNF563-201ENST00000293725 PAXBP1Q9Y5B6 917 aa18.42■□□□□ 0.54
ZNF563-201ENST00000293725 LIG1P18858 919 aa18.42■□□□□ 0.54
ZNF563-201ENST00000293725 ANO6Q4KMQ2 910 aa18.42■□□□□ 0.54
ZNF563-201ENST00000293725 CBX8Q9HC52 389 aa18.42■□□□□ 0.54
ZNF563-201ENST00000293725 SGSM2O43147 1006 aa18.42■□□□□ 0.54
ZNF563-201ENST00000293725 EPB41L2O43491 1005 aaKnown RBP18.42■□□□□ 0.54
ZNF563-201ENST00000293725 ATP7BP35670 1465 aa18.41■□□□□ 0.54
ZNF563-201ENST00000293725 TTC6Q86TZ1 520 aa18.41■□□□□ 0.54
ZNF563-201ENST00000293725 LSG1Q9H089 658 aaKnown RBP18.41■□□□□ 0.54
ZNF563-201ENST00000293725 GNAI3P08754 354 aa18.4■□□□□ 0.54
ZNF563-201ENST00000293725 ZNF75DP51815 510 aa18.4■□□□□ 0.54
ZNF563-201ENST00000293725 TERF2Q15554 542 aa18.4■□□□□ 0.54
ZNF563-201ENST00000293725 SPG7Q9UQ90 795 aa18.4■□□□□ 0.54
ZNF563-201ENST00000293725 LRRFIP2Q9Y608 721 aaKnown RBP18.4■□□□□ 0.54
ZNF563-201ENST00000293725 FERMT3Q86UX7 667 aa18.4■□□□□ 0.54
ZNF563-201ENST00000293725 KRT222Q8N1A0 295 aa18.4■□□□□ 0.54
ZNF563-201ENST00000293725 TNMDQ9H2S6 317 aa18.4■□□□□ 0.54
ZNF563-201ENST00000293725 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.4■□□□□ 0.54
ZNF563-201ENST00000293725 V9GYY5 206 aaPredicted RBP18.4■□□□□ 0.54
ZNF563-201ENST00000293725 AATKQ6ZMQ8 1374 aa18.4■□□□□ 0.54
ZNF563-201ENST00000293725 KCNJ4P48050 445 aa18.39■□□□□ 0.53
ZNF563-201ENST00000293725 CEP135Q66GS9 1140 aa18.39■□□□□ 0.53
ZNF563-201ENST00000293725 FAM173BQ6P4H8 233 aa18.39■□□□□ 0.53
ZNF563-201ENST00000293725 CACTINQ8WUQ7 758 aaKnown RBP18.39■□□□□ 0.53
ZNF563-201ENST00000293725 HYPKQ9NX55 129 aa18.39■□□□□ 0.53
ZNF563-201ENST00000293725 VGLL3A8MV65 326 aa18.39■□□□□ 0.53
ZNF563-201ENST00000293725 CWC27Q6UX04 472 aaKnown RBP18.39■□□□□ 0.53
ZNF563-201ENST00000293725 KRT85P78386 507 aa18.38■□□□□ 0.53
ZNF563-201ENST00000293725 TSPYL4Q9UJ04 414 aa18.38■□□□□ 0.53
ZNF563-201ENST00000293725 EDC4Q6P2E9 1401 aaKnown RBP18.38■□□□□ 0.53
ZNF563-201ENST00000293725 AOX1Q06278 1338 aa18.38■□□□□ 0.53
ZNF563-201ENST00000293725 CDK11BP21127 795 aaKnown RBP18.38■□□□□ 0.53
ZNF563-201ENST00000293725 EIF4A2Q14240 407 aaKnown RBP18.38■□□□□ 0.53
ZNF563-201ENST00000293725 PLA2G4DQ86XP0 818 aa18.38■□□□□ 0.53
ZNF563-201ENST00000293725 DACT1Q9NYF0 836 aa18.38■□□□□ 0.53
ZNF563-201ENST00000293725 CLIP2Q9UDT6 1046 aa18.38■□□□□ 0.53
ZNF563-201ENST00000293725 KMT5BQ4FZB7 885 aa18.37■□□□□ 0.53
ZNF563-201ENST00000293725 PDRG1Q9NUG6 133 aa18.37■□□□□ 0.53
ZNF563-201ENST00000293725 CCDC66A2RUB6 948 aa18.37■□□□□ 0.53
ZNF563-201ENST00000293725 PDE4CQ08493 712 aa18.37■□□□□ 0.53
ZNF563-201ENST00000293725 NECAB1Q8N987 351 aa18.37■□□□□ 0.53
ZNF563-201ENST00000293725 ZNF397Q8NF99 534 aaPredicted RBP18.37■□□□□ 0.53
ZNF563-201ENST00000293725 DDX54Q8TDD1 881 aaKnown RBP18.37■□□□□ 0.53
ZNF563-201ENST00000293725 NECTIN2Q92692 538 aa18.37■□□□□ 0.53
ZNF563-201ENST00000293725 JAKMIP1Q96N16 626 aaKnown RBP18.37■□□□□ 0.53
ZNF563-201ENST00000293725 STK31Q9BXU1 1019 aa18.37■□□□□ 0.53
ZNF563-201ENST00000293725 ERICH4A6NGS2 130 aa18.36■□□□□ 0.53
ZNF563-201ENST00000293725 CCDC144BQ3MJ40 725 aa18.36■□□□□ 0.53
ZNF563-201ENST00000293725 CCDC144CPQ8IYA2 1237 aa18.36■□□□□ 0.53
ZNF563-201ENST00000293725 ZNF215Q9UL58 517 aaPredicted RBP18.36■□□□□ 0.53
ZNF563-201ENST00000293725 GOLGA6L4A6NEF3 574 aa18.36■□□□□ 0.53
ZNF563-201ENST00000293725 SLC52A1Q9NWF4 448 aa18.36■□□□□ 0.53
ZNF563-201ENST00000293725 LARP1BQ659C4 914 aaKnown RBP18.36■□□□□ 0.53
ZNF563-201ENST00000293725 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms