RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 GCP02774 474 aa24.37■■□□□ 1.49
SCUBE1-201ENST00000290460 BEND3Q5T5X7 828 aa24.37■■□□□ 1.49
SCUBE1-201ENST00000290460 IL25Q9H293 177 aa24.37■■□□□ 1.49
SCUBE1-201ENST00000290460 POLA2Q14181 598 aa24.37■■□□□ 1.49
SCUBE1-201ENST00000290460 DDX49Q9Y6V7 483 aaKnown RBP24.37■■□□□ 1.49
SCUBE1-201ENST00000290460 PHRF1Q9P1Y6 1649 aaKnown RBP24.37■■□□□ 1.49
SCUBE1-201ENST00000290460 PLEKHO1Q53GL0 409 aaPredicted RBP24.36■■□□□ 1.49
SCUBE1-201ENST00000290460 CWC22Q9HCG8 908 aaKnown RBP24.36■■□□□ 1.49
SCUBE1-201ENST00000290460 HOXB7P09629 217 aa24.35■■□□□ 1.49
SCUBE1-201ENST00000290460 RHPN1Q8TCX5 695 aa24.35■■□□□ 1.49
SCUBE1-201ENST00000290460 ADCY9O60503 1353 aa24.35■■□□□ 1.49
SCUBE1-201ENST00000290460 ANO8Q9HCE9 1232 aaPredicted RBP24.35■■□□□ 1.49
SCUBE1-201ENST00000290460 ZDHHC9Q9Y397 364 aa24.35■■□□□ 1.49
SCUBE1-201ENST00000290460 NOL8Q76FK4 1167 aaKnown RBP24.34■■□□□ 1.49
SCUBE1-201ENST00000290460 ARHGEF25Q86VW2 580 aa24.34■■□□□ 1.49
SCUBE1-201ENST00000290460 TMX3Q96JJ7 454 aa24.34■■□□□ 1.49
SCUBE1-201ENST00000290460 ISY1Q9ULR0 285 aaKnown RBP24.34■■□□□ 1.49
SCUBE1-201ENST00000290460 KLHL40Q2TBA0 621 aa24.33■■□□□ 1.49
SCUBE1-201ENST00000290460 CHAMP1Q96JM3 812 aa24.33■■□□□ 1.49
SCUBE1-201ENST00000290460 RNMTO43148 476 aaKnown RBP24.33■■□□□ 1.49
SCUBE1-201ENST00000290460 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.33■■□□□ 1.49
SCUBE1-201ENST00000290460 PRAMEF22A3QJZ6 481 aa24.32■■□□□ 1.48
SCUBE1-201ENST00000290460 RAB11FIP3O75154 756 aa24.32■■□□□ 1.48
SCUBE1-201ENST00000290460 MCCP23508 829 aa24.32■■□□□ 1.48
SCUBE1-201ENST00000290460 C1orf141Q5JVX7 400 aa24.32■■□□□ 1.48
SCUBE1-201ENST00000290460 ANKRD24Q8TF21 1146 aa24.32■■□□□ 1.48
SCUBE1-201ENST00000290460 PROSER3Q2NL68 480 aa24.32■■□□□ 1.48
SCUBE1-201ENST00000290460 AXIN2Q9Y2T1 843 aa24.32■■□□□ 1.48
SCUBE1-201ENST00000290460 AOX1Q06278 1338 aa24.32■■□□□ 1.48
SCUBE1-201ENST00000290460 PI4K2BQ8TCG2 481 aa24.31■■□□□ 1.48
SCUBE1-201ENST00000290460 FOXD4L5Q5VV16 416 aaPredicted RBP24.31■■□□□ 1.48
SCUBE1-201ENST00000290460 FOXD4L4Q8WXT5 416 aaPredicted RBP24.31■■□□□ 1.48
SCUBE1-201ENST00000290460 LMBRD1Q9NUN5 540 aa24.31■■□□□ 1.48
SCUBE1-201ENST00000290460 AMOTQ4VCS5 1084 aa24.3■■□□□ 1.48
SCUBE1-201ENST00000290460 UPF3BQ9BZI7 483 aaKnown RBP24.3■■□□□ 1.48
SCUBE1-201ENST00000290460 RGPD5Q99666 1765 aa24.3■■□□□ 1.48
SCUBE1-201ENST00000290460 KIF1BPQ96EK5 621 aa24.3■■□□□ 1.48
SCUBE1-201ENST00000290460 DBF4Q9UBU7 674 aaPredicted RBP24.29■■□□□ 1.48
SCUBE1-201ENST00000290460 SLIT3O75094 1523 aa24.29■■□□□ 1.48
SCUBE1-201ENST00000290460 NCLP19338 710 aaKnown RBP24.28■■□□□ 1.48
SCUBE1-201ENST00000290460 MAP3K2Q9Y2U5 619 aa24.28■■□□□ 1.48
SCUBE1-201ENST00000290460 NPHP4O75161 1426 aaPredicted RBP24.28■■□□□ 1.48
SCUBE1-201ENST00000290460 GIGYF1O75420 1035 aaPredicted RBP24.28■■□□□ 1.48
SCUBE1-201ENST00000290460 ANAPC15P60006 121 aa24.28■■□□□ 1.48
SCUBE1-201ENST00000290460 CAVIN1Q6NZI2 390 aaKnown RBP24.27■■□□□ 1.48
SCUBE1-201ENST00000290460 NCAPD2Q15021 1401 aa24.27■■□□□ 1.47
SCUBE1-201ENST00000290460 PRPF40AO75400 957 aaKnown RBP24.26■■□□□ 1.47
SCUBE1-201ENST00000290460 CWF19L2Q2TBE0 894 aaKnown RBP24.26■■□□□ 1.47
SCUBE1-201ENST00000290460 DNAJC5Q9H3Z4 198 aa24.26■■□□□ 1.47
SCUBE1-201ENST00000290460 OS9Q13438 667 aaPredicted RBP24.25■■□□□ 1.47
SCUBE1-201ENST00000290460 CHMP4AQ9BY43 222 aa24.25■■□□□ 1.47
SCUBE1-201ENST00000290460 TRPM3Q9HCF6 1732 aaPredicted RBP24.25■■□□□ 1.47
SCUBE1-201ENST00000290460 MCM2P49736 904 aa24.24■■□□□ 1.47
SCUBE1-201ENST00000290460 C9orf78Q9NZ63 289 aaPredicted RBP24.24■■□□□ 1.47
SCUBE1-201ENST00000290460 KRT28Q7Z3Y7 464 aa24.23■■□□□ 1.47
SCUBE1-201ENST00000290460 SIPA1L3O60292 1781 aaPredicted RBP24.23■■□□□ 1.47
SCUBE1-201ENST00000290460 HSPA4P34932 840 aa24.23■■□□□ 1.47
SCUBE1-201ENST00000290460 CUL4AQ13619 759 aa24.23■■□□□ 1.47
SCUBE1-201ENST00000290460 PA2G4Q9UQ80 394 aaKnown RBP24.23■■□□□ 1.47
SCUBE1-201ENST00000290460 ZC3H6P61129 1189 aaKnown RBP24.22■■□□□ 1.47
SCUBE1-201ENST00000290460 HEG1Q9ULI3 1381 aa24.22■■□□□ 1.47
SCUBE1-201ENST00000290460 SGSM2O43147 1006 aa24.22■■□□□ 1.47
SCUBE1-201ENST00000290460 KSR2Q6VAB6 950 aa24.22■■□□□ 1.47
SCUBE1-201ENST00000290460 GPT2Q8TD30 523 aa24.22■■□□□ 1.47
SCUBE1-201ENST00000290460 CNTROBQ8N137 903 aa24.21■■□□□ 1.47
SCUBE1-201ENST00000290460 ADAMTSL3P82987 1691 aa24.21■■□□□ 1.47
SCUBE1-201ENST00000290460 CAMTA1Q9Y6Y1 1673 aa24.21■■□□□ 1.47
SCUBE1-201ENST00000290460 ZSCAN23Q3MJ62 389 aa24.21■■□□□ 1.47
SCUBE1-201ENST00000290460 CWC27Q6UX04 472 aaKnown RBP24.21■■□□□ 1.47
SCUBE1-201ENST00000290460 OVOS2A0A0G2JMS6 1433 aa24.2■■□□□ 1.46
SCUBE1-201ENST00000290460 AIMP1Q12904 312 aaKnown RBP24.2■■□□□ 1.46
SCUBE1-201ENST00000290460 HSP90AB4PQ58FF6 505 aa24.2■■□□□ 1.46
SCUBE1-201ENST00000290460 IL17RAQ96F46 866 aa24.2■■□□□ 1.46
SCUBE1-201ENST00000290460 RBM27Q9P2N5 1060 aaKnown RBP24.2■■□□□ 1.46
SCUBE1-201ENST00000290460 RAD50Q92878 1312 aa24.2■■□□□ 1.46
SCUBE1-201ENST00000290460 MTX1Q13505 466 aa24.19■■□□□ 1.46
SCUBE1-201ENST00000290460 PROSER2Q86WR7 435 aaPredicted RBP24.19■■□□□ 1.46
SCUBE1-201ENST00000290460 SPG7Q9UQ90 795 aa24.19■■□□□ 1.46
SCUBE1-201ENST00000290460 CRYBG1Q9Y4K1 1723 aa24.18■■□□□ 1.46
SCUBE1-201ENST00000290460 ALDH1L1O75891 902 aa24.18■■□□□ 1.46
SCUBE1-201ENST00000290460 NASPP49321 788 aaPredicted RBP24.18■■□□□ 1.46
SCUBE1-201ENST00000290460 SLC39A6Q13433 755 aa24.18■■□□□ 1.46
SCUBE1-201ENST00000290460 ERBB3P21860 1342 aa24.18■■□□□ 1.46
SCUBE1-201ENST00000290460 BRD1O95696 1058 aa24.18■■□□□ 1.46
SCUBE1-201ENST00000290460 LSG1Q9H089 658 aaKnown RBP24.18■■□□□ 1.46
SCUBE1-201ENST00000290460 NSFL1CQ9UNZ2 370 aaKnown RBP24.18■■□□□ 1.46
SCUBE1-201ENST00000290460 CLASRPQ8N2M8 674 aaKnown RBP24.17■■□□□ 1.46
SCUBE1-201ENST00000290460 INTS4Q96HW7 963 aaKnown RBP24.17■■□□□ 1.46
SCUBE1-201ENST00000290460 ZNF445P59923 1031 aa24.17■■□□□ 1.46
SCUBE1-201ENST00000290460 RASEFQ8IZ41 740 aa24.17■■□□□ 1.46
SCUBE1-201ENST00000290460 SNX14Q9Y5W7 946 aa24.17■■□□□ 1.46
SCUBE1-201ENST00000290460 ERBB4Q15303 1308 aa24.17■■□□□ 1.46
SCUBE1-201ENST00000290460 HYPKQ9NX55 129 aa24.16■■□□□ 1.46
SCUBE1-201ENST00000290460 USP42Q9H9J4 1324 aaKnown RBP24.16■■□□□ 1.46
SCUBE1-201ENST00000290460 GLRX3O76003 335 aaKnown RBP24.15■■□□□ 1.46
SCUBE1-201ENST00000290460 DDX17Q92841 729 aaKnown RBP24.15■■□□□ 1.46
SCUBE1-201ENST00000290460 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.15■■□□□ 1.46
SCUBE1-201ENST00000290460 TTC41PQ6P2S7 1318 aa24.15■■□□□ 1.46
SCUBE1-201ENST00000290460 C1orf167Q5SNV9 1468 aa24.15■■□□□ 1.46
SCUBE1-201ENST00000290460 PDIA6Q15084 440 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms