RNA–Protein interactions for RNA: ENST00000288839.6

SSX2B-201, Transcript of SSX family member 2B, humanhuman

TSL 3

Gene SSX2B, Length 801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2B-201ENST00000288839 RRP7AQ9Y3A4 280 aaKnown RBP9.04□□□□□ -0.96
SSX2B-201ENST00000288839 C4BP0C0L5 1744 aa9.04□□□□□ -0.96
SSX2B-201ENST00000288839 SCN11AQ9UI33 1791 aa9.04□□□□□ -0.96
SSX2B-201ENST00000288839 SENP3-EIF4A1A0A087X0R7 540 aa9.03□□□□□ -0.96
SSX2B-201ENST00000288839 SLC39A6Q13433 755 aa9.03□□□□□ -0.96
SSX2B-201ENST00000288839 PNISRQ8TF01 805 aaKnown RBP9.03□□□□□ -0.96
SSX2B-201ENST00000288839 RTF1Q92541 710 aaKnown RBP9.03□□□□□ -0.96
SSX2B-201ENST00000288839 SMARCC1Q92922 1105 aaPredicted RBP9.03□□□□□ -0.96
SSX2B-201ENST00000288839 RUNDC1Q96C34 613 aa9.03□□□□□ -0.96
SSX2B-201ENST00000288839 SGIP1Q9BQI5 828 aa9.03□□□□□ -0.96
SSX2B-201ENST00000288839 THUMPD2Q9BTF0 503 aaKnown RBP9.03□□□□□ -0.96
SSX2B-201ENST00000288839 ZBTB47Q9UFB7 747 aaPredicted RBP9.03□□□□□ -0.96
SSX2B-201ENST00000288839 MRC1P22897 1456 aa9.02□□□□□ -0.96
SSX2B-201ENST00000288839 CEMIPQ8WUJ3 1361 aa9.02□□□□□ -0.97
SSX2B-201ENST00000288839 ADAMTS7Q9UKP4 1686 aa9.02□□□□□ -0.97
SSX2B-201ENST00000288839 LOC102724428A0A0B4J2F2 783 aa9.02□□□□□ -0.97
SSX2B-201ENST00000288839 PTCD1O75127 700 aaKnown RBP9.02□□□□□ -0.97
SSX2B-201ENST00000288839 TMPOP42166 694 aaKnown RBP9.02□□□□□ -0.97
SSX2B-201ENST00000288839 SIK1P57059 783 aa9.02□□□□□ -0.97
SSX2B-201ENST00000288839 TEFQ10587 303 aa9.02□□□□□ -0.97
SSX2B-201ENST00000288839 NEUROD2Q15784 382 aa9.02□□□□□ -0.97
SSX2B-201ENST00000288839 SLC27A3Q5K4L6 730 aa9.02□□□□□ -0.97
SSX2B-201ENST00000288839 MSL1Q68DK7 614 aa9.02□□□□□ -0.97
SSX2B-201ENST00000288839 RIPK4P57078 832 aa9.01□□□□□ -0.97
SSX2B-201ENST00000288839 COL24A1Q17RW2 1714 aa9.01□□□□□ -0.97
SSX2B-201ENST00000288839 UBR3Q6ZT12 1888 aa9.01□□□□□ -0.97
SSX2B-201ENST00000288839 SLC4A9Q96Q91 983 aa9.01□□□□□ -0.97
SSX2B-201ENST00000288839 MTFR1LQ9H019 292 aa9.01□□□□□ -0.97
SSX2B-201ENST00000288839 TFCP2L1Q9NZI6 479 aa9.01□□□□□ -0.97
SSX2B-201ENST00000288839 VIRMAQ69YN4 1812 aaKnown RBP9.01□□□□□ -0.97
SSX2B-201ENST00000288839 APAF1O14727 1248 aa9□□□□□ -0.97
SSX2B-201ENST00000288839 KCNQ3O43525 872 aa9□□□□□ -0.97
SSX2B-201ENST00000288839 HTATSF1O43719 755 aaKnown RBP9□□□□□ -0.97
SSX2B-201ENST00000288839 ITPK1Q13572 414 aa9□□□□□ -0.97
SSX2B-201ENST00000288839 FAM9BQ8IZU0 186 aa9□□□□□ -0.97
SSX2B-201ENST00000288839 LINC00116Q8NCU8 138 aa9□□□□□ -0.97
SSX2B-201ENST00000288839 FHDC1Q9C0D6 1143 aaPredicted RBP9□□□□□ -0.97
SSX2B-201ENST00000288839 DLG5Q8TDM6 1919 aa8.99□□□□□ -0.97
SSX2B-201ENST00000288839 BTBD11A6QL63 1104 aa8.99□□□□□ -0.97
SSX2B-201ENST00000288839 PHF14O94880 888 aa8.99□□□□□ -0.97
SSX2B-201ENST00000288839 ATP6V1AP38606 617 aa8.99□□□□□ -0.97
SSX2B-201ENST00000288839 COL23A1Q86Y22 540 aaPredicted RBP8.99□□□□□ -0.97
SSX2B-201ENST00000288839 MIS18AQ9NYP9 233 aa8.99□□□□□ -0.97
SSX2B-201ENST00000288839 COL5A3P25940 1745 aaPredicted RBP8.99□□□□□ -0.97
SSX2B-201ENST00000288839 TJP1Q07157 1748 aa8.99□□□□□ -0.97
SSX2B-201ENST00000288839 TAF7Q15545 349 aaPredicted RBP8.98□□□□□ -0.97
SSX2B-201ENST00000288839 MS4A3Q96HJ5 214 aa8.98□□□□□ -0.97
SSX2B-201ENST00000288839 TRIM35Q9UPQ4 493 aa8.98□□□□□ -0.97
SSX2B-201ENST00000288839 C4AP0C0L4 1744 aa8.97□□□□□ -0.97
SSX2B-201ENST00000288839 SIPA1L3O60292 1781 aaPredicted RBP8.97□□□□□ -0.97
SSX2B-201ENST00000288839 KCPQ6ZWJ8 1503 aa8.97□□□□□ -0.97
SSX2B-201ENST00000288839 LMOD3Q0VAK6 560 aa8.97□□□□□ -0.97
SSX2B-201ENST00000288839 ZNF790Q6PG37 636 aa8.97□□□□□ -0.97
SSX2B-201ENST00000288839 DNAJC10Q8IXB1 793 aa8.97□□□□□ -0.97
SSX2B-201ENST00000288839 TTC5Q8N0Z6 440 aa8.97□□□□□ -0.97
SSX2B-201ENST00000288839 NLGN2Q8NFZ4 835 aa8.97□□□□□ -0.97
SSX2B-201ENST00000288839 ZNF496Q96IT1 587 aaPredicted RBP8.97□□□□□ -0.97
SSX2B-201ENST00000288839 SYT17Q9BSW7 474 aa8.97□□□□□ -0.97
SSX2B-201ENST00000288839 MYH14Q7Z406 1995 aaKnown RBP8.96□□□□□ -0.98
SSX2B-201ENST00000288839 CCER2I3L3R5 266 aa8.96□□□□□ -0.98
SSX2B-201ENST00000288839 DCAF8Q5TAQ9 597 aa8.96□□□□□ -0.98
SSX2B-201ENST00000288839 OTUD5Q96G74 571 aa8.96□□□□□ -0.98
SSX2B-201ENST00000288839 AK7Q96M32 723 aa8.96□□□□□ -0.98
SSX2B-201ENST00000288839 ARXQ96QS3 562 aa8.96□□□□□ -0.98
SSX2B-201ENST00000288839 SALL2Q9Y467 1007 aaPredicted RBP8.96□□□□□ -0.98
SSX2B-201ENST00000288839 LAS1LQ9Y4W2 734 aaKnown RBP8.96□□□□□ -0.98
SSX2B-201ENST00000288839 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.95□□□□□ -0.98
SSX2B-201ENST00000288839 PRAMEF22A3QJZ6 481 aa8.95□□□□□ -0.98
SSX2B-201ENST00000288839 GNPATO15228 680 aa8.95□□□□□ -0.98
SSX2B-201ENST00000288839 CRKLP46109 303 aaKnown RBP8.95□□□□□ -0.98
SSX2B-201ENST00000288839 FAM212AQ96EL1 285 aa8.95□□□□□ -0.98
SSX2B-201ENST00000288839 KIF12Q96FN5 646 aa8.95□□□□□ -0.98
SSX2B-201ENST00000288839 FMNL2Q96PY5 1086 aa8.95□□□□□ -0.98
SSX2B-201ENST00000288839 TSPYL4Q9UJ04 414 aa8.95□□□□□ -0.98
SSX2B-201ENST00000288839 WWC3Q9ULE0 1092 aa8.95□□□□□ -0.98
SSX2B-201ENST00000288839 HEG1Q9ULI3 1381 aa8.95□□□□□ -0.98
SSX2B-201ENST00000288839 UBR2Q8IWV8 1755 aa8.94□□□□□ -0.98
SSX2B-201ENST00000288839 MAP3K13O43283 966 aa8.94□□□□□ -0.98
SSX2B-201ENST00000288839 CYP19A1P11511 503 aaPredicted RBP8.94□□□□□ -0.98
SSX2B-201ENST00000288839 CNTNAP4Q9C0A0 1308 aa8.94□□□□□ -0.98
SSX2B-201ENST00000288839 POTEB2H3BUK9 544 aa8.93□□□□□ -0.98
SSX2B-201ENST00000288839 EIF4A1P60842 406 aaKnown RBP8.93□□□□□ -0.98
SSX2B-201ENST00000288839 INTS5Q6P9B9 1019 aaKnown RBP8.93□□□□□ -0.98
SSX2B-201ENST00000288839 VSIG10Q8N0Z9 540 aa8.93□□□□□ -0.98
SSX2B-201ENST00000288839 PLSCR2Q9NRY7 297 aa8.93□□□□□ -0.98
SSX2B-201ENST00000288839 CCDC87Q9NVE4 849 aa8.93□□□□□ -0.98
SSX2B-201ENST00000288839 TRPC6Q9Y210 931 aa8.93□□□□□ -0.98
SSX2B-201ENST00000288839 USP16Q9Y5T5 823 aa8.93□□□□□ -0.98
SSX2B-201ENST00000288839 CICQ96RK0 1608 aaPredicted RBP8.93□□□□□ -0.98
SSX2B-201ENST00000288839 ZNF831Q5JPB2 1677 aa8.93□□□□□ -0.98
SSX2B-201ENST00000288839 CHL1O00533 1208 aa8.92□□□□□ -0.98
SSX2B-201ENST00000288839 SNRPA1P09661 255 aaKnown RBP8.92□□□□□ -0.98
SSX2B-201ENST00000288839 POLD1P28340 1107 aa8.92□□□□□ -0.98
SSX2B-201ENST00000288839 PIP4K2AP48426 406 aaPredicted RBP8.92□□□□□ -0.98
SSX2B-201ENST00000288839 KRT24Q2M2I5 525 aa8.92□□□□□ -0.98
SSX2B-201ENST00000288839 RC3H1Q5TC82 1133 aaKnown RBP8.92□□□□□ -0.98
SSX2B-201ENST00000288839 WWC1Q8IX03 1113 aa8.92□□□□□ -0.98
SSX2B-201ENST00000288839 PELP1Q8IZL8 1130 aaKnown RBP8.92□□□□□ -0.98
SSX2B-201ENST00000288839 ZBTB1Q9Y2K1 713 aa8.92□□□□□ -0.98
SSX2B-201ENST00000288839 RTCBQ9Y3I0 505 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms