RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 TAX1BP1Q86VP1 789 aa9.71□□□□□ -0.85
CACNA1D-201ENST00000288139 NAA15Q9BXJ9 866 aaKnown RBP9.71□□□□□ -0.85
CACNA1D-201ENST00000288139 KIAA1328Q86T90 577 aa9.71□□□□□ -0.86
CACNA1D-201ENST00000288139 SPAG1Q07617 926 aa9.71□□□□□ -0.86
CACNA1D-201ENST00000288139 CTCFLQ8NI51 663 aaPredicted RBP9.71□□□□□ -0.86
CACNA1D-201ENST00000288139 CNGA1P29973 690 aa9.71□□□□□ -0.86
CACNA1D-201ENST00000288139 HOXA7P31268 230 aaPredicted RBP9.71□□□□□ -0.86
CACNA1D-201ENST00000288139 TSNARE1Q96NA8 513 aa9.71□□□□□ -0.86
CACNA1D-201ENST00000288139 SSH2Q76I76 1423 aa9.7□□□□□ -0.86
CACNA1D-201ENST00000288139 DAAM2Q86T65 1068 aa9.7□□□□□ -0.86
CACNA1D-201ENST00000288139 ARFGAP3Q9NP61 516 aa9.7□□□□□ -0.86
CACNA1D-201ENST00000288139 VPS36Q86VN1 386 aa9.7□□□□□ -0.86
CACNA1D-201ENST00000288139 ANKRD12Q6UB98 2062 aa9.7□□□□□ -0.86
CACNA1D-201ENST00000288139 TBC1D2Q9BYX2 928 aa9.7□□□□□ -0.86
CACNA1D-201ENST00000288139 SPATS2Q86XZ4 545 aaKnown RBP9.7□□□□□ -0.86
CACNA1D-201ENST00000288139 COL17A1Q9UMD9 1497 aaPredicted RBP9.7□□□□□ -0.86
CACNA1D-201ENST00000288139 U3KPZ7 1027 aaPredicted RBP9.7□□□□□ -0.86
CACNA1D-201ENST00000288139 AOX1Q06278 1338 aa9.7□□□□□ -0.86
CACNA1D-201ENST00000288139 NGDNQ8NEJ9 315 aaKnown RBP9.7□□□□□ -0.86
CACNA1D-201ENST00000288139 IQCDQ96DY2 449 aa9.7□□□□□ -0.86
CACNA1D-201ENST00000288139 FMNL2Q96PY5 1086 aa9.7□□□□□ -0.86
CACNA1D-201ENST00000288139 OGFRQ9NZT2 677 aa9.7□□□□□ -0.86
CACNA1D-201ENST00000288139 ADGRL2O95490 1459 aa9.7□□□□□ -0.86
CACNA1D-201ENST00000288139 SLC4A3P48751 1232 aa9.69□□□□□ -0.86
CACNA1D-201ENST00000288139 TNIP1Q15025 636 aa9.69□□□□□ -0.86
CACNA1D-201ENST00000288139 LARP1BQ659C4 914 aaKnown RBP9.69□□□□□ -0.86
CACNA1D-201ENST00000288139 LIMCH1Q9UPQ0 1083 aa9.69□□□□□ -0.86
CACNA1D-201ENST00000288139 TTC21BQ7Z4L5 1316 aa9.69□□□□□ -0.86
CACNA1D-201ENST00000288139 BLOC1S2Q6QNY1 142 aa9.69□□□□□ -0.86
CACNA1D-201ENST00000288139 ZMYND15Q9H091 742 aa9.69□□□□□ -0.86
CACNA1D-201ENST00000288139 MKRN1Q9UHC7 482 aaKnown RBP9.69□□□□□ -0.86
CACNA1D-201ENST00000288139 KIF24Q5T7B8 1368 aa9.69□□□□□ -0.86
CACNA1D-201ENST00000288139 TNPO1Q92973 898 aaKnown RBP9.69□□□□□ -0.86
CACNA1D-201ENST00000288139 CTAGE1Q96RT6 745 aa9.69□□□□□ -0.86
CACNA1D-201ENST00000288139 FIBPO43427 364 aa9.69□□□□□ -0.86
CACNA1D-201ENST00000288139 CKAP4Q07065 602 aaKnown RBP9.69□□□□□ -0.86
CACNA1D-201ENST00000288139 ZNF397Q8NF99 534 aaPredicted RBP9.69□□□□□ -0.86
CACNA1D-201ENST00000288139 BBXQ8WY36 941 aaPredicted RBP9.69□□□□□ -0.86
CACNA1D-201ENST00000288139 MAP2K1Q02750 393 aaPredicted RBP9.69□□□□□ -0.86
CACNA1D-201ENST00000288139 RARSP54136 660 aaKnown RBP9.68□□□□□ -0.86
CACNA1D-201ENST00000288139 CCDC50Q8IVM0 306 aa9.68□□□□□ -0.86
CACNA1D-201ENST00000288139 KIF1BO60333 1816 aa9.68□□□□□ -0.86
CACNA1D-201ENST00000288139 CEP112Q8N8E3 955 aa9.68□□□□□ -0.86
CACNA1D-201ENST00000288139 CCDC89Q8N998 374 aa9.68□□□□□ -0.86
CACNA1D-201ENST00000288139 BAZ2BQ9UIF8 2168 aaKnown RBP9.68□□□□□ -0.86
CACNA1D-201ENST00000288139 CCDC14Q49A88 953 aa9.68□□□□□ -0.86
CACNA1D-201ENST00000288139 STMN4Q9H169 189 aaPredicted RBP9.68□□□□□ -0.86
CACNA1D-201ENST00000288139 TWISTNBQ3B726 338 aaPredicted RBP9.68□□□□□ -0.86
CACNA1D-201ENST00000288139 SPECC1LQ69YQ0 1117 aa9.68□□□□□ -0.86
CACNA1D-201ENST00000288139 TBC1D2BQ9UPU7 963 aa9.68□□□□□ -0.86
CACNA1D-201ENST00000288139 CROCCP2Q86T23 111 aa9.68□□□□□ -0.86
CACNA1D-201ENST00000288139 TACO1Q9BSH4 297 aaKnown RBP9.68□□□□□ -0.86
CACNA1D-201ENST00000288139 ARFGAP2Q8N6H7 521 aa9.68□□□□□ -0.86
CACNA1D-201ENST00000288139 RBM28Q9NW13 759 aaKnown RBP9.68□□□□□ -0.86
CACNA1D-201ENST00000288139 RAB3GAP1Q15042 981 aa9.67□□□□□ -0.86
CACNA1D-201ENST00000288139 CCDC82Q8N4S0 544 aa9.67□□□□□ -0.86
CACNA1D-201ENST00000288139 NACAP1Q9BZK3 213 aa9.67□□□□□ -0.86
CACNA1D-201ENST00000288139 CLASP1Q7Z460 1538 aa9.67□□□□□ -0.86
CACNA1D-201ENST00000288139 SBNO2Q9Y2G9 1366 aa9.67□□□□□ -0.86
CACNA1D-201ENST00000288139 HNRNPMP52272 730 aaKnown RBP eCLIP9.67□□□□□ -0.86
CACNA1D-201ENST00000288139 NCAPGQ9BPX3 1015 aa9.67□□□□□ -0.86
CACNA1D-201ENST00000288139 SERPINC1P01008 464 aa9.67□□□□□ -0.86
CACNA1D-201ENST00000288139 SENP3-EIF4A1A0A087X0R7 540 aa9.67□□□□□ -0.86
CACNA1D-201ENST00000288139 ZNF445P59923 1031 aa9.67□□□□□ -0.86
CACNA1D-201ENST00000288139 PIP4K2BP78356 416 aa9.67□□□□□ -0.86
CACNA1D-201ENST00000288139 BMP2KQ9NSY1 1161 aaPredicted RBP9.67□□□□□ -0.86
CACNA1D-201ENST00000288139 ABCC5O15440 1437 aa9.67□□□□□ -0.86
CACNA1D-201ENST00000288139 ME1P48163 572 aa9.67□□□□□ -0.86
CACNA1D-201ENST00000288139 PRAG1Q86YV5 1406 aa9.67□□□□□ -0.86
CACNA1D-201ENST00000288139 RFX1P22670 979 aa9.67□□□□□ -0.86
CACNA1D-201ENST00000288139 MTHFSP49914 203 aa9.67□□□□□ -0.86
CACNA1D-201ENST00000288139 RPGRIP1Q96KN7 1286 aa9.67□□□□□ -0.86
CACNA1D-201ENST00000288139 BAG4O95429 457 aaKnown RBP9.67□□□□□ -0.86
CACNA1D-201ENST00000288139 SKIDA1Q1XH10 827 aa9.67□□□□□ -0.86
CACNA1D-201ENST00000288139 KIF1BPQ96EK5 621 aa9.67□□□□□ -0.86
CACNA1D-201ENST00000288139 TICAM2Q86XR7 235 aa9.66□□□□□ -0.86
CACNA1D-201ENST00000288139 SAMD9Q5K651 1589 aa9.66□□□□□ -0.86
CACNA1D-201ENST00000288139 C6orf163Q5TEZ5 329 aa9.66□□□□□ -0.86
CACNA1D-201ENST00000288139 RNF214Q8ND24 703 aa9.66□□□□□ -0.86
CACNA1D-201ENST00000288139 SETD1BQ9UPS6 1966 aaKnown RBP9.66□□□□□ -0.86
CACNA1D-201ENST00000288139 SYCE3A1L190 88 aa9.66□□□□□ -0.86
CACNA1D-201ENST00000288139 XRCC6P12956 609 aaKnown RBP eCLIP9.66□□□□□ -0.86
CACNA1D-201ENST00000288139 UTP14CQ5TAP6 766 aaKnown RBP9.66□□□□□ -0.86
CACNA1D-201ENST00000288139 RAD50Q92878 1312 aa9.66□□□□□ -0.86
CACNA1D-201ENST00000288139 ODF2LQ9ULJ1 636 aa9.66□□□□□ -0.86
CACNA1D-201ENST00000288139 SMC1AQ14683 1233 aaKnown RBP9.66□□□□□ -0.86
CACNA1D-201ENST00000288139 PDILTQ8N807 584 aa9.66□□□□□ -0.86
CACNA1D-201ENST00000288139 ALS2CR12Q96Q35 445 aa9.66□□□□□ -0.86
CACNA1D-201ENST00000288139 SYNMO15061 1565 aa9.66□□□□□ -0.86
CACNA1D-201ENST00000288139 PPFIA3O75145 1194 aa9.66□□□□□ -0.86
CACNA1D-201ENST00000288139 SYTL4Q96C24 671 aaPredicted RBP9.66□□□□□ -0.86
CACNA1D-201ENST00000288139 SSR1P43307 286 aaKnown RBP9.66□□□□□ -0.86
CACNA1D-201ENST00000288139 DUSP27Q5VZP5 1158 aa9.66□□□□□ -0.86
CACNA1D-201ENST00000288139 TAOK3Q9H2K8 898 aa9.66□□□□□ -0.86
CACNA1D-201ENST00000288139 GNL3LQ9NVN8 582 aaKnown RBP9.66□□□□□ -0.86
CACNA1D-201ENST00000288139 MLECQ14165 292 aa9.65□□□□□ -0.86
CACNA1D-201ENST00000288139 CLUL1Q15846 466 aa9.65□□□□□ -0.86
CACNA1D-201ENST00000288139 FERMT2Q96AC1 680 aa9.65□□□□□ -0.86
CACNA1D-201ENST00000288139 MPHOSPH6Q99547 160 aaKnown RBP9.65□□□□□ -0.86
CACNA1D-201ENST00000288139 FSD1Q9BTV5 496 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms