RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 CRB1P82279 1406 aa9.43□□□□□ -0.9
TRIM42-201ENST00000286349 C8orf34Q49A92 452 aa9.43□□□□□ -0.9
TRIM42-201ENST00000286349 ZBTB40Q9NUA8 1239 aa9.43□□□□□ -0.9
TRIM42-201ENST00000286349 ATRNO75882 1429 aa9.42□□□□□ -0.9
TRIM42-201ENST00000286349 POTEAQ6S8J7 498 aa9.42□□□□□ -0.9
TRIM42-201ENST00000286349 BABAM1Q9NWV8 329 aa9.42□□□□□ -0.9
TRIM42-201ENST00000286349 SOS1Q07889 1333 aaPredicted RBP9.42□□□□□ -0.9
TRIM42-201ENST00000286349 PATL2C9JE40 543 aaKnown RBP9.42□□□□□ -0.9
TRIM42-201ENST00000286349 CERS3Q8IU89 383 aa9.42□□□□□ -0.9
TRIM42-201ENST00000286349 GJD4Q96KN9 370 aaPredicted RBP9.42□□□□□ -0.9
TRIM42-201ENST00000286349 ABCC4O15439 1325 aa9.42□□□□□ -0.9
TRIM42-201ENST00000286349 RGPD2P0DJD1 1756 aa9.42□□□□□ -0.9
TRIM42-201ENST00000286349 NWD2Q9ULI1 1742 aa9.41□□□□□ -0.9
TRIM42-201ENST00000286349 PLCD3Q8N3E9 789 aa9.41□□□□□ -0.9
TRIM42-201ENST00000286349 VIRMAQ69YN4 1812 aaKnown RBP9.41□□□□□ -0.9
TRIM42-201ENST00000286349 TSPYL6Q8N831 410 aa9.41□□□□□ -0.9
TRIM42-201ENST00000286349 TRPC5Q9UL62 973 aaPredicted RBP9.41□□□□□ -0.9
TRIM42-201ENST00000286349 PDZRN3Q9UPQ7 1066 aa9.41□□□□□ -0.9
TRIM42-201ENST00000286349 PTPRCP08575 1304 aa9.41□□□□□ -0.9
TRIM42-201ENST00000286349 FAM208AQ9UK61 1670 aaKnown RBP9.41□□□□□ -0.9
TRIM42-201ENST00000286349 ONECUT3O60422 494 aaPredicted RBP9.4□□□□□ -0.9
TRIM42-201ENST00000286349 MTHFSDQ2M296 383 aaKnown RBP9.4□□□□□ -0.9
TRIM42-201ENST00000286349 SMC5Q8IY18 1101 aa9.4□□□□□ -0.9
TRIM42-201ENST00000286349 C8orf58Q8NAV2 365 aa9.4□□□□□ -0.9
TRIM42-201ENST00000286349 PRDM16Q9HAZ2 1276 aa9.4□□□□□ -0.9
TRIM42-201ENST00000286349 MEGF6O75095 1541 aa9.4□□□□□ -0.91
TRIM42-201ENST00000286349 DISP2A7MBM2 1401 aa9.4□□□□□ -0.91
TRIM42-201ENST00000286349 DCTN1Q14203 1278 aa9.4□□□□□ -0.91
TRIM42-201ENST00000286349 FAM98CQ17RN3 349 aaKnown RBP9.4□□□□□ -0.91
TRIM42-201ENST00000286349 ZNF772Q68DY9 489 aaPredicted RBP9.4□□□□□ -0.91
TRIM42-201ENST00000286349 SKAP1Q86WV1 359 aa9.4□□□□□ -0.91
TRIM42-201ENST00000286349 GNAT3A8MTJ3 354 aa9.39□□□□□ -0.91
TRIM42-201ENST00000286349 ZBTB7BO15156 539 aaPredicted RBP9.39□□□□□ -0.91
TRIM42-201ENST00000286349 BARGINQ6ZT62 677 aa9.39□□□□□ -0.91
TRIM42-201ENST00000286349 GCC1Q96CN9 775 aa9.39□□□□□ -0.91
TRIM42-201ENST00000286349 DNAJC2Q99543 621 aaKnown RBP9.39□□□□□ -0.91
TRIM42-201ENST00000286349 HDAC5Q9UQL6 1122 aa9.39□□□□□ -0.91
TRIM42-201ENST00000286349 THRAP3Q9Y2W1 955 aaKnown RBP9.39□□□□□ -0.91
TRIM42-201ENST00000286349 MCM10Q7L590 875 aa9.39□□□□□ -0.91
TRIM42-201ENST00000286349 SMAP1Q8IYB5 467 aaPredicted RBP9.39□□□□□ -0.91
TRIM42-201ENST00000286349 LRRC37A3O60309 1634 aa9.39□□□□□ -0.91
TRIM42-201ENST00000286349 GLI3P10071 1580 aa9.39□□□□□ -0.91
TRIM42-201ENST00000286349 IL2RBP14784 551 aa9.38□□□□□ -0.91
TRIM42-201ENST00000286349 UPF2Q9HAU5 1272 aaKnown RBP9.38□□□□□ -0.91
TRIM42-201ENST00000286349 MAP3K5Q99683 1374 aa9.38□□□□□ -0.91
TRIM42-201ENST00000286349 ELL2O00472 640 aaPredicted RBP9.38□□□□□ -0.91
TRIM42-201ENST00000286349 TSPYL4Q9UJ04 414 aa9.38□□□□□ -0.91
TRIM42-201ENST00000286349 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.38□□□□□ -0.91
TRIM42-201ENST00000286349 INTS3Q68E01 1043 aaKnown RBP9.37□□□□□ -0.91
TRIM42-201ENST00000286349 CYP27B1O15528 508 aa9.37□□□□□ -0.91
TRIM42-201ENST00000286349 TATP17735 454 aaPredicted RBP9.37□□□□□ -0.91
TRIM42-201ENST00000286349 UTP14CQ5TAP6 766 aaKnown RBP9.37□□□□□ -0.91
TRIM42-201ENST00000286349 RAPGEF4Q8WZA2 1011 aa9.37□□□□□ -0.91
TRIM42-201ENST00000286349 OVOS2A0A0G2JMS6 1433 aa9.37□□□□□ -0.91
TRIM42-201ENST00000286349 RBM6P78332 1123 aaKnown RBP9.36□□□□□ -0.91
TRIM42-201ENST00000286349 NUCB1Q02818 461 aa9.36□□□□□ -0.91
TRIM42-201ENST00000286349 SEPT12Q8IYM1 358 aa9.36□□□□□ -0.91
TRIM42-201ENST00000286349 ZCRB1Q8TBF4 217 aaKnown RBP9.36□□□□□ -0.91
TRIM42-201ENST00000286349 MAFGO15525 162 aa9.35□□□□□ -0.91
TRIM42-201ENST00000286349 RXRBP28702 533 aa9.35□□□□□ -0.91
TRIM42-201ENST00000286349 ANAPC15P60006 121 aa9.35□□□□□ -0.91
TRIM42-201ENST00000286349 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.35□□□□□ -0.91
TRIM42-201ENST00000286349 TAF7Q15545 349 aaPredicted RBP9.35□□□□□ -0.91
TRIM42-201ENST00000286349 AMOTQ4VCS5 1084 aa9.35□□□□□ -0.91
TRIM42-201ENST00000286349 PLEKHO1Q53GL0 409 aaPredicted RBP9.35□□□□□ -0.91
TRIM42-201ENST00000286349 MARCH10Q8NA82 808 aaPredicted RBP9.35□□□□□ -0.91
TRIM42-201ENST00000286349 STK31Q9BXU1 1019 aa9.35□□□□□ -0.91
TRIM42-201ENST00000286349 EXOC5O00471 708 aa9.34□□□□□ -0.91
TRIM42-201ENST00000286349 CCDC30Q5VVM6 783 aa9.34□□□□□ -0.91
TRIM42-201ENST00000286349 DDX54Q8TDD1 881 aaKnown RBP9.34□□□□□ -0.91
TRIM42-201ENST00000286349 PHKG2P15735 406 aa9.34□□□□□ -0.91
TRIM42-201ENST00000286349 PSEN1P49768 467 aa9.34□□□□□ -0.91
TRIM42-201ENST00000286349 CCT4P50991 539 aaKnown RBP9.34□□□□□ -0.91
TRIM42-201ENST00000286349 CHD1LQ86WJ1 897 aa9.34□□□□□ -0.91
TRIM42-201ENST00000286349 RPAP2Q8IXW5 612 aaPredicted RBP9.34□□□□□ -0.91
TRIM42-201ENST00000286349 CDCA7Q9BWT1 371 aaPredicted RBP9.34□□□□□ -0.91
TRIM42-201ENST00000286349 LGR6Q9HBX8 967 aa9.34□□□□□ -0.91
TRIM42-201ENST00000286349 PLEKHG2Q9H7P9 1386 aa9.34□□□□□ -0.91
TRIM42-201ENST00000286349 SLC4A2P04920 1241 aa9.33□□□□□ -0.92
TRIM42-201ENST00000286349 DDB1Q16531 1140 aa9.33□□□□□ -0.92
TRIM42-201ENST00000286349 FAM182BQ5T319 152 aa9.33□□□□□ -0.92
TRIM42-201ENST00000286349 ZNF530Q6P9A1 599 aaPredicted RBP9.33□□□□□ -0.92
TRIM42-201ENST00000286349 GPATCH11Q8N954 259 aa9.33□□□□□ -0.92
TRIM42-201ENST00000286349 IL17REQ8NFR9 667 aa9.33□□□□□ -0.92
TRIM42-201ENST00000286349 SPG7Q9UQ90 795 aa9.33□□□□□ -0.92
TRIM42-201ENST00000286349 RGS12O14924 1447 aa9.33□□□□□ -0.92
TRIM42-201ENST00000286349 CEMIPQ8WUJ3 1361 aa9.33□□□□□ -0.92
TRIM42-201ENST00000286349 HOXB7P09629 217 aa9.33□□□□□ -0.92
TRIM42-201ENST00000286349 TRIM44Q96DX7 344 aaPredicted RBP9.33□□□□□ -0.92
TRIM42-201ENST00000286349 THSD7AQ9UPZ6 1657 aa9.32□□□□□ -0.92
TRIM42-201ENST00000286349 APPP05067 770 aa9.32□□□□□ -0.92
TRIM42-201ENST00000286349 OS9Q13438 667 aaPredicted RBP9.32□□□□□ -0.92
TRIM42-201ENST00000286349 NKX1-1Q15270 411 aaPredicted RBP9.32□□□□□ -0.92
TRIM42-201ENST00000286349 AKAP4Q5JQC9 854 aa9.32□□□□□ -0.92
TRIM42-201ENST00000286349 BECN1Q14457 450 aa9.32□□□□□ -0.92
TRIM42-201ENST00000286349 MPRIPQ6WCQ1 1025 aa9.32□□□□□ -0.92
TRIM42-201ENST00000286349 CEP120Q8N960 986 aa9.32□□□□□ -0.92
TRIM42-201ENST00000286349 CWC22Q9HCG8 908 aaKnown RBP9.32□□□□□ -0.92
TRIM42-201ENST00000286349 TNS2Q63HR2 1409 aa9.31□□□□□ -0.92
TRIM42-201ENST00000286349 IFNL2Q8IZJ0 200 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms