RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 SBF2Q86WG5 1849 aa24.14■■□□□ 1.46
PDLIM3-202ENST00000284770 PDE3AQ14432 1141 aa24.14■■□□□ 1.46
PDLIM3-202ENST00000284770 ATF7IPQ6VMQ6 1270 aa24.14■■□□□ 1.46
PDLIM3-202ENST00000284770 C20orf194Q5TEA3 1177 aa24.14■■□□□ 1.45
PDLIM3-202ENST00000284770 SLC4A9Q96Q91 983 aa24.14■■□□□ 1.45
PDLIM3-202ENST00000284770 TRIM27P14373 513 aa24.13■■□□□ 1.45
PDLIM3-202ENST00000284770 PTPRCP08575 1304 aa24.12■■□□□ 1.45
PDLIM3-202ENST00000284770 DDX21Q9NR30 783 aaKnown RBP eCLIP24.12■■□□□ 1.45
PDLIM3-202ENST00000284770 LOC102724428A0A0B4J2F2 783 aa24.11■■□□□ 1.45
PDLIM3-202ENST00000284770 MS4A1P11836 297 aa24.11■■□□□ 1.45
PDLIM3-202ENST00000284770 SIK1P57059 783 aa24.11■■□□□ 1.45
PDLIM3-202ENST00000284770 PDIA6Q15084 440 aa24.11■■□□□ 1.45
PDLIM3-202ENST00000284770 G2E3Q7L622 706 aa24.11■■□□□ 1.45
PDLIM3-202ENST00000284770 LAMB4A4D0S4 1761 aa24.11■■□□□ 1.45
PDLIM3-202ENST00000284770 DNAJC10Q8IXB1 793 aa24.11■■□□□ 1.45
PDLIM3-202ENST00000284770 BTAF1O14981 1849 aa24.1■■□□□ 1.45
PDLIM3-202ENST00000284770 ERBB4Q15303 1308 aa24.1■■□□□ 1.45
PDLIM3-202ENST00000284770 FLIIQ13045 1269 aa24.1■■□□□ 1.45
PDLIM3-202ENST00000284770 HYPKQ9NX55 129 aa24.1■■□□□ 1.45
PDLIM3-202ENST00000284770 TNNQ9UQP3 1299 aa24.1■■□□□ 1.45
PDLIM3-202ENST00000284770 CACNA1FO60840 1977 aa24.09■■□□□ 1.45
PDLIM3-202ENST00000284770 STARD3NLO95772 234 aa24.09■■□□□ 1.45
PDLIM3-202ENST00000284770 DZIP1LQ8IYY4 767 aaKnown RBP24.09■■□□□ 1.45
PDLIM3-202ENST00000284770 CLUAP1Q96AJ1 413 aa24.09■■□□□ 1.45
PDLIM3-202ENST00000284770 API5Q9BZZ5 524 aaKnown RBP24.09■■□□□ 1.45
PDLIM3-202ENST00000284770 ANXA1P04083 346 aa24.08■■□□□ 1.45
PDLIM3-202ENST00000284770 ATP6V1AP38606 617 aa24.08■■□□□ 1.45
PDLIM3-202ENST00000284770 PROSER3Q2NL68 480 aa24.08■■□□□ 1.45
PDLIM3-202ENST00000284770 PHAXQ9H814 394 aaKnown RBP24.08■■□□□ 1.45
PDLIM3-202ENST00000284770 TRIM37O94972 964 aa24.08■■□□□ 1.44
PDLIM3-202ENST00000284770 FTSJ3Q8IY81 847 aaKnown RBP24.08■■□□□ 1.44
PDLIM3-202ENST00000284770 PANK1Q8TE04 598 aa24.08■■□□□ 1.44
PDLIM3-202ENST00000284770 RLBP1P12271 317 aa24.07■■□□□ 1.44
PDLIM3-202ENST00000284770 PPP4R2Q9NY27 417 aa24.06■■□□□ 1.44
PDLIM3-202ENST00000284770 A1BGP04217 495 aa24.06■■□□□ 1.44
PDLIM3-202ENST00000284770 CYP19A1P11511 503 aaPredicted RBP24.06■■□□□ 1.44
PDLIM3-202ENST00000284770 EXOC6Q8TAG9 804 aa24.06■■□□□ 1.44
PDLIM3-202ENST00000284770 MYL6BP14649 208 aa24.05■■□□□ 1.44
PDLIM3-202ENST00000284770 FKBP5Q13451 457 aaPredicted RBP24.05■■□□□ 1.44
PDLIM3-202ENST00000284770 LRP10Q7Z4F1 713 aa24.05■■□□□ 1.44
PDLIM3-202ENST00000284770 NBPF26B4DH59 902 aa24.04■■□□□ 1.44
PDLIM3-202ENST00000284770 NBPF14Q5TI25 921 aa24.04■■□□□ 1.44
PDLIM3-202ENST00000284770 NBPF10Q6P3W6 841 aaKnown RBP24.04■■□□□ 1.44
PDLIM3-202ENST00000284770 NBPF15Q8N660 670 aa24.04■■□□□ 1.44
PDLIM3-202ENST00000284770 CRBNQ96SW2 442 aa24.04■■□□□ 1.44
PDLIM3-202ENST00000284770 TJP1Q07157 1748 aa24.04■■□□□ 1.44
PDLIM3-202ENST00000284770 CICQ96RK0 1608 aaPredicted RBP24.04■■□□□ 1.44
PDLIM3-202ENST00000284770 ZNF831Q5JPB2 1677 aa24.04■■□□□ 1.44
PDLIM3-202ENST00000284770 ITPK1Q13572 414 aa24.03■■□□□ 1.44
PDLIM3-202ENST00000284770 ABCC4O15439 1325 aa24.03■■□□□ 1.44
PDLIM3-202ENST00000284770 PIP4K2AP48426 406 aaPredicted RBP24.03■■□□□ 1.44
PDLIM3-202ENST00000284770 COG6Q9Y2V7 657 aa24.03■■□□□ 1.44
PDLIM3-202ENST00000284770 EP400Q96L91 3159 aa24.02■■□□□ 1.44
PDLIM3-202ENST00000284770 TMEM57Q8N5G2 664 aa24.01■■□□□ 1.43
PDLIM3-202ENST00000284770 MVPQ14764 893 aaKnown RBP24■■□□□ 1.43
PDLIM3-202ENST00000284770 COPS6Q7L5N1 327 aa24■■□□□ 1.43
PDLIM3-202ENST00000284770 XAGE3Q8WTP9 111 aa24■■□□□ 1.43
PDLIM3-202ENST00000284770 F6X3S4 739 aa23.99■■□□□ 1.43
PDLIM3-202ENST00000284770 AIMP1Q12904 312 aaKnown RBP23.99■■□□□ 1.43
PDLIM3-202ENST00000284770 CCNL1Q9UK58 526 aaPredicted RBP23.99■■□□□ 1.43
PDLIM3-202ENST00000284770 LY75O60449 1722 aa23.99■■□□□ 1.43
PDLIM3-202ENST00000284770 DDX58O95786 925 aaKnown RBP23.98■■□□□ 1.43
PDLIM3-202ENST00000284770 PI4KAP2A4QPH2 592 aa23.98■■□□□ 1.43
PDLIM3-202ENST00000284770 CRKLP46109 303 aaKnown RBP23.98■■□□□ 1.43
PDLIM3-202ENST00000284770 INTS3Q68E01 1043 aaKnown RBP23.98■■□□□ 1.43
PDLIM3-202ENST00000284770 KSR2Q6VAB6 950 aa23.98■■□□□ 1.43
PDLIM3-202ENST00000284770 PI4KAP1Q8N8J0 262 aa23.98■■□□□ 1.43
PDLIM3-202ENST00000284770 ZBTB1Q9Y2K1 713 aa23.98■■□□□ 1.43
PDLIM3-202ENST00000284770 KCNQ4P56696 695 aa23.97■■□□□ 1.43
PDLIM3-202ENST00000284770 INTS5Q6P9B9 1019 aaKnown RBP23.97■■□□□ 1.43
PDLIM3-202ENST00000284770 ITPRIPQ8IWB1 547 aa23.97■■□□□ 1.43
PDLIM3-202ENST00000284770 CCDC87Q9NVE4 849 aa23.97■■□□□ 1.43
PDLIM3-202ENST00000284770 LINC00116Q8NCU8 138 aa23.96■■□□□ 1.43
PDLIM3-202ENST00000284770 ADCY9O60503 1353 aa23.96■■□□□ 1.43
PDLIM3-202ENST00000284770 SLC4A10Q6U841 1118 aa23.96■■□□□ 1.43
PDLIM3-202ENST00000284770 PLSCR1O15162 318 aa23.95■■□□□ 1.42
PDLIM3-202ENST00000284770 IL6STP40189 918 aaPredicted RBP23.95■■□□□ 1.42
PDLIM3-202ENST00000284770 ANKRD13DQ6ZTN6 518 aa23.95■■□□□ 1.42
PDLIM3-202ENST00000284770 DNAAF4Q8WXU2 420 aa23.95■■□□□ 1.42
PDLIM3-202ENST00000284770 DDX19BQ9UMR2 479 aa23.95■■□□□ 1.42
PDLIM3-202ENST00000284770 COL5A3P25940 1745 aaPredicted RBP23.94■■□□□ 1.42
PDLIM3-202ENST00000284770 APBA3O96018 575 aa23.94■■□□□ 1.42
PDLIM3-202ENST00000284770 CCT4P50991 539 aaKnown RBP23.94■■□□□ 1.42
PDLIM3-202ENST00000284770 MAP3K2Q9Y2U5 619 aa23.94■■□□□ 1.42
PDLIM3-202ENST00000284770 SLC27A3Q5K4L6 730 aa23.93■■□□□ 1.42
PDLIM3-202ENST00000284770 RIC3Q7Z5B4 369 aa23.93■■□□□ 1.42
PDLIM3-202ENST00000284770 PXDNLA1KZ92 1463 aa23.93■■□□□ 1.42
PDLIM3-202ENST00000284770 CNTNAP4Q9C0A0 1308 aa23.93■■□□□ 1.42
PDLIM3-202ENST00000284770 RC3H1Q5TC82 1133 aaKnown RBP23.93■■□□□ 1.42
PDLIM3-202ENST00000284770 B4GALNT3Q6L9W6 998 aa23.93■■□□□ 1.42
PDLIM3-202ENST00000284770 RREB1Q92766 1687 aa23.92■■□□□ 1.42
PDLIM3-202ENST00000284770 TTLL7Q6ZT98 887 aa23.92■■□□□ 1.42
PDLIM3-202ENST00000284770 PLBD2Q8NHP8 589 aa23.92■■□□□ 1.42
PDLIM3-202ENST00000284770 LRRC4BQ9NT99 713 aa23.92■■□□□ 1.42
PDLIM3-202ENST00000284770 ZNF330Q9Y3S2 320 aaPredicted RBP23.92■■□□□ 1.42
PDLIM3-202ENST00000284770 EIF5P55010 431 aaKnown RBP23.91■■□□□ 1.42
PDLIM3-202ENST00000284770 AAMPQ13685 434 aa23.91■■□□□ 1.42
PDLIM3-202ENST00000284770 ZBTB7BO15156 539 aaPredicted RBP23.9■■□□□ 1.42
PDLIM3-202ENST00000284770 BEND3Q5T5X7 828 aa23.9■■□□□ 1.42
PDLIM3-202ENST00000284770 NPM2Q86SE8 214 aaKnown RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms