RNA–Protein interactions for RNA: ENST00000284073.6

MSI2-201, Transcript of musashi RNA binding protein 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MSI2, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-201ENST00000284073 USO1O60763 962 aaKnown RBP18.32■□□□□ 0.52
MSI2-201ENST00000284073 CCT2P78371 535 aaKnown RBP18.32■□□□□ 0.52
MSI2-201ENST00000284073 TMEM132AQ24JP5 1023 aa18.32■□□□□ 0.52
MSI2-201ENST00000284073 GSTTP1A0A1W2PQM5 241 aa18.32■□□□□ 0.52
MSI2-201ENST00000284073 GOLGA6L9A6NEM1 432 aa18.32■□□□□ 0.52
MSI2-201ENST00000284073 FKBP15Q5T1M5 1219 aa18.32■□□□□ 0.52
MSI2-201ENST00000284073 ATP2B2Q01814 1243 aa18.31■□□□□ 0.52
MSI2-201ENST00000284073 MIS18AQ9NYP9 233 aa18.31■□□□□ 0.52
MSI2-201ENST00000284073 CUX1P39880 1505 aa18.31■□□□□ 0.52
MSI2-201ENST00000284073 NCOA2Q15596 1464 aa18.31■□□□□ 0.52
MSI2-201ENST00000284073 MYL6BP14649 208 aa18.31■□□□□ 0.52
MSI2-201ENST00000284073 HSP90AA4PQ58FG1 418 aa18.31■□□□□ 0.52
MSI2-201ENST00000284073 TMX3Q96JJ7 454 aa18.31■□□□□ 0.52
MSI2-201ENST00000284073 BOLA2Q9H3K6 86 aa18.31■□□□□ 0.52
MSI2-201ENST00000284073 CEP131Q9UPN4 1083 aa18.31■□□□□ 0.52
MSI2-201ENST00000284073 TDRD12Q587J7 1177 aaKnown RBP18.31■□□□□ 0.52
MSI2-201ENST00000284073 UBAC1Q9BSL1 405 aa18.31■□□□□ 0.52
MSI2-201ENST00000284073 BMP2KQ9NSY1 1161 aaPredicted RBP18.31■□□□□ 0.52
MSI2-201ENST00000284073 BMP2KLQ5H9B9 411 aa18.31■□□□□ 0.52
MSI2-201ENST00000284073 RBM42Q9BTD8 480 aaKnown RBP18.31■□□□□ 0.52
MSI2-201ENST00000284073 SPINK5Q9NQ38 1064 aaPredicted RBP18.31■□□□□ 0.52
MSI2-201ENST00000284073 ATRIPQ8WXE1 791 aa18.3■□□□□ 0.52
MSI2-201ENST00000284073 GCOM1H8Y6P7 765 aaPredicted RBP18.3■□□□□ 0.52
MSI2-201ENST00000284073 MYZAPP0CAP1 466 aa18.3■□□□□ 0.52
MSI2-201ENST00000284073 PTGS1P23219 599 aa18.3■□□□□ 0.52
MSI2-201ENST00000284073 SOGA3Q5TF21 947 aa18.3■□□□□ 0.52
MSI2-201ENST00000284073 TRIM27P14373 513 aa18.3■□□□□ 0.52
MSI2-201ENST00000284073 U2AF2P26368 475 aaKnown RBP eCLIP18.3■□□□□ 0.523e-7■□□□□ 10.9
MSI2-201ENST00000284073 CCDC82Q8N4S0 544 aa18.3■□□□□ 0.52
MSI2-201ENST00000284073 HSF2BPO75031 334 aa18.3■□□□□ 0.52
MSI2-201ENST00000284073 TSHZ3Q63HK5 1081 aa18.3■□□□□ 0.52
MSI2-201ENST00000284073 GLRX3O76003 335 aaKnown RBP18.29■□□□□ 0.52
MSI2-201ENST00000284073 SPECC1LQ69YQ0 1117 aa18.29■□□□□ 0.52
MSI2-201ENST00000284073 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.29■□□□□ 0.522e-6■■■□□ 15.2
MSI2-201ENST00000284073 WASF1Q92558 559 aa18.29■□□□□ 0.52
MSI2-201ENST00000284073 TDO2P48775 406 aa18.29■□□□□ 0.52
MSI2-201ENST00000284073 KIF1BPQ96EK5 621 aa18.29■□□□□ 0.52
MSI2-201ENST00000284073 KRBA2Q6ZNG9 492 aa18.29■□□□□ 0.52
MSI2-201ENST00000284073 FAM200AQ8TCP9 573 aa18.28■□□□□ 0.52
MSI2-201ENST00000284073 DNAJC25Q9H1X3 360 aa18.28■□□□□ 0.52
MSI2-201ENST00000284073 CEP63Q96MT8 703 aa18.28■□□□□ 0.52
MSI2-201ENST00000284073 ZSCAN22P10073 491 aaPredicted RBP18.27■□□□□ 0.52
MSI2-201ENST00000284073 HS1BP3Q53T59 392 aa18.27■□□□□ 0.52
MSI2-201ENST00000284073 GIGYF2Q6Y7W6 1299 aaKnown RBP18.27■□□□□ 0.52
MSI2-201ENST00000284073 FEZ1Q99689 392 aa18.27■□□□□ 0.52
MSI2-201ENST00000284073 NAA15Q9BXJ9 866 aaKnown RBP18.27■□□□□ 0.52
MSI2-201ENST00000284073 CEP112Q8N8E3 955 aa18.27■□□□□ 0.52
MSI2-201ENST00000284073 HYPKQ9NX55 129 aa18.27■□□□□ 0.52
MSI2-201ENST00000284073 POLR3DP05423 398 aaPredicted RBP18.27■□□□□ 0.52
MSI2-201ENST00000284073 CTAGE15A4D2H0 777 aa18.27■□□□□ 0.51
MSI2-201ENST00000284073 CTAGE8P0CG41 777 aa18.27■□□□□ 0.51
MSI2-201ENST00000284073 UBASH3AP57075 661 aa18.27■□□□□ 0.51
MSI2-201ENST00000284073 CTAGE6Q86UF2 777 aa18.27■□□□□ 0.51
MSI2-201ENST00000284073 CTAGE4Q8IX94 777 aa18.27■□□□□ 0.51
MSI2-201ENST00000284073 TMCO5BA8MYB1 307 aa18.27■□□□□ 0.51
MSI2-201ENST00000284073 ANKRD30BQ9BXX2 1392 aa18.26■□□□□ 0.51
MSI2-201ENST00000284073 SCLT1Q96NL6 688 aa18.26■□□□□ 0.51
MSI2-201ENST00000284073 SERPINA10Q9UK55 444 aa18.26■□□□□ 0.51
MSI2-201ENST00000284073 DNAJC21Q5F1R6 531 aaKnown RBP18.26■□□□□ 0.51
MSI2-201ENST00000284073 ALS2CR12Q96Q35 445 aa18.26■□□□□ 0.51
MSI2-201ENST00000284073 CABP1Q9NZU7 370 aa18.26■□□□□ 0.51
MSI2-201ENST00000284073 U3KPZ7 1027 aaPredicted RBP18.26■□□□□ 0.51
MSI2-201ENST00000284073 EBAG9O00559 213 aa18.26■□□□□ 0.51
MSI2-201ENST00000284073 CTNNBL1Q8WYA6 563 aaPredicted RBP18.26■□□□□ 0.51
MSI2-201ENST00000284073 F6X3S4 739 aa18.25■□□□□ 0.51
MSI2-201ENST00000284073 PAF1Q8N7H5 531 aa18.25■□□□□ 0.51
MSI2-201ENST00000284073 OTUD6BQ8N6M0 293 aa18.25■□□□□ 0.51
MSI2-201ENST00000284073 PRAM1Q96QH2 718 aa18.25■□□□□ 0.51
MSI2-201ENST00000284073 GPRASP1Q5JY77 1395 aa18.25■□□□□ 0.51
MSI2-201ENST00000284073 NECAB1Q8N987 351 aa18.25■□□□□ 0.51
MSI2-201ENST00000284073 KIF20AO95235 890 aa18.25■□□□□ 0.51
MSI2-201ENST00000284073 MSL1Q68DK7 614 aa18.25■□□□□ 0.51
MSI2-201ENST00000284073 PRPF4BQ13523 1007 aaKnown RBP18.25■□□□□ 0.51
MSI2-201ENST00000284073 NFE2L2Q16236 605 aa18.25■□□□□ 0.51
MSI2-201ENST00000284073 IDH1O75874 414 aaKnown RBP18.24■□□□□ 0.51
MSI2-201ENST00000284073 RRS1Q15050 365 aaKnown RBP18.24■□□□□ 0.51
MSI2-201ENST00000284073 SYT10Q6XYQ8 523 aa18.24■□□□□ 0.51
MSI2-201ENST00000284073 ZSCAN25Q6NSZ9 544 aa18.24■□□□□ 0.51
MSI2-201ENST00000284073 AOPEPQ8N6M6 819 aa18.24■□□□□ 0.51
MSI2-201ENST00000284073 DACT1Q9NYF0 836 aa18.24■□□□□ 0.51
MSI2-201ENST00000284073 PLEKHO1Q53GL0 409 aaPredicted RBP18.24■□□□□ 0.51
MSI2-201ENST00000284073 MACROD2A1Z1Q3 448 aa18.23■□□□□ 0.51
MSI2-201ENST00000284073 GBP6Q6ZN66 633 aa18.23■□□□□ 0.51
MSI2-201ENST00000284073 FBF1Q8TES7 1133 aa18.23■□□□□ 0.51
MSI2-201ENST00000284073 DRC1Q96MC2 740 aa18.23■□□□□ 0.51
MSI2-201ENST00000284073 CFTRP13569 1480 aa18.23■□□□□ 0.51
MSI2-201ENST00000284073 RAB3GAP1Q15042 981 aa18.23■□□□□ 0.51
MSI2-201ENST00000284073 CCDC85AQ96PX6 553 aaPredicted RBP18.23■□□□□ 0.51
MSI2-201ENST00000284073 CCDC8Q9H0W5 538 aaPredicted RBP18.23■□□□□ 0.51
MSI2-201ENST00000284073 KIAA1107Q9UPP5 1409 aa18.23■□□□□ 0.51
MSI2-201ENST00000284073 C17orf53Q8N3J3 647 aaPredicted RBP18.23■□□□□ 0.51
MSI2-201ENST00000284073 FCHSD2O94868 740 aa18.23■□□□□ 0.51
MSI2-201ENST00000284073 PUF60Q9UHX1 559 aaKnown RBP18.23■□□□□ 0.51
MSI2-201ENST00000284073 ZEB2O60315 1214 aa18.23■□□□□ 0.51
MSI2-201ENST00000284073 CAVIN2O95810 425 aa18.23■□□□□ 0.51
MSI2-201ENST00000284073 SEC24BO95487 1268 aa18.22■□□□□ 0.51
MSI2-201ENST00000284073 SYT1P21579 422 aa18.22■□□□□ 0.51
MSI2-201ENST00000284073 MTIF2P46199 727 aaKnown RBP18.22■□□□□ 0.51
MSI2-201ENST00000284073 TTC22Q5TAA0 569 aa18.22■□□□□ 0.51
MSI2-201ENST00000284073 GOLGA1Q92805 767 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms