RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 MYO1BO43795 1136 aa23.62■■□□□ 1.37
CACNA1B-201ENST00000277549 NUP88Q99567 741 aaPredicted RBP23.62■■□□□ 1.37
CACNA1B-201ENST00000277549 AQRO60306 1485 aaKnown RBP eCLIP23.62■■□□□ 1.37
CACNA1B-201ENST00000277549 SSRP1Q08945 709 aaKnown RBP23.61■■□□□ 1.37
CACNA1B-201ENST00000277549 CHD1LQ86WJ1 897 aa23.61■■□□□ 1.37
CACNA1B-201ENST00000277549 AKAP2Q9Y2D5 859 aa23.61■■□□□ 1.37
CACNA1B-201ENST00000277549 GJC1P36383 396 aa23.61■■□□□ 1.37
CACNA1B-201ENST00000277549 MCM2P49736 904 aa23.61■■□□□ 1.37
CACNA1B-201ENST00000277549 ERLIN1O75477 346 aa23.61■■□□□ 1.37
CACNA1B-201ENST00000277549 ATP2B3Q16720 1220 aa23.61■■□□□ 1.37
CACNA1B-201ENST00000277549 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.61■■□□□ 1.37
CACNA1B-201ENST00000277549 ATP5J2-PTCD1G3V325 749 aa23.61■■□□□ 1.37
CACNA1B-201ENST00000277549 K7ELQ4 463 aaPredicted RBP23.61■■□□□ 1.37
CACNA1B-201ENST00000277549 LUZP1Q86V48 1076 aa23.61■■□□□ 1.37
CACNA1B-201ENST00000277549 ZNF408Q9H9D4 720 aa23.61■■□□□ 1.37
CACNA1B-201ENST00000277549 VEZTQ9HBM0 779 aa23.61■■□□□ 1.37
CACNA1B-201ENST00000277549 CABP5Q9NP86 173 aa23.61■■□□□ 1.37
CACNA1B-201ENST00000277549 SYNCQ9H7C4 482 aa23.6■■□□□ 1.37
CACNA1B-201ENST00000277549 IFIT3O14879 490 aaKnown RBP23.6■■□□□ 1.37
CACNA1B-201ENST00000277549 HAND2P61296 217 aa23.6■■□□□ 1.37
CACNA1B-201ENST00000277549 MAP3K12Q12852 859 aa23.6■■□□□ 1.37
CACNA1B-201ENST00000277549 ZNF692Q9BU19 519 aaPredicted RBP23.6■■□□□ 1.37
CACNA1B-201ENST00000277549 RRBP1Q9P2E9 1410 aaKnown RBP23.6■■□□□ 1.37
CACNA1B-201ENST00000277549 FOXO3O43524 673 aa23.6■■□□□ 1.37
CACNA1B-201ENST00000277549 ZBTB9Q96C00 473 aa23.6■■□□□ 1.37
CACNA1B-201ENST00000277549 F6X3S4 739 aa23.6■■□□□ 1.37
CACNA1B-201ENST00000277549 APBB1IPQ7Z5R6 666 aaPredicted RBP23.6■■□□□ 1.37
CACNA1B-201ENST00000277549 ANKRD18BA2A2Z9 1011 aa23.59■■□□□ 1.37
CACNA1B-201ENST00000277549 EXOC5O00471 708 aa23.59■■□□□ 1.37
CACNA1B-201ENST00000277549 CCDC7Q96M83 1385 aa23.59■■□□□ 1.37
CACNA1B-201ENST00000277549 DDX23Q9BUQ8 820 aaKnown RBP23.59■■□□□ 1.37
CACNA1B-201ENST00000277549 GOLGA8AA7E2F4 631 aa23.59■■□□□ 1.37
CACNA1B-201ENST00000277549 GOLGA8BA8MQT2 603 aa23.59■■□□□ 1.37
CACNA1B-201ENST00000277549 FYCO1Q9BQS8 1478 aa23.59■■□□□ 1.37
CACNA1B-201ENST00000277549 CCDC194A0A1B0GVG4 234 aa23.59■■□□□ 1.37
CACNA1B-201ENST00000277549 BAG4O95429 457 aaKnown RBP23.59■■□□□ 1.37
CACNA1B-201ENST00000277549 CASQ1P31415 396 aa23.58■■□□□ 1.37
CACNA1B-201ENST00000277549 ST5P78524 1137 aa23.58■■□□□ 1.37
CACNA1B-201ENST00000277549 IDEP14735 1019 aa23.58■■□□□ 1.37
CACNA1B-201ENST00000277549 PROCA1Q8NCQ7 364 aaPredicted RBP23.58■■□□□ 1.37
CACNA1B-201ENST00000277549 C8orf37Q96NL8 207 aa23.58■■□□□ 1.37
CACNA1B-201ENST00000277549 BRPF3Q9ULD4 1205 aa23.58■■□□□ 1.37
CACNA1B-201ENST00000277549 DDX46Q7L014 1031 aaKnown RBP23.58■■□□□ 1.37
CACNA1B-201ENST00000277549 DUSP27Q5VZP5 1158 aa23.58■■□□□ 1.36
CACNA1B-201ENST00000277549 ATF7IPQ6VMQ6 1270 aa23.58■■□□□ 1.36
CACNA1B-201ENST00000277549 ZNF213O14771 459 aa23.57■■□□□ 1.36
CACNA1B-201ENST00000277549 ZBTB21Q9ULJ3 1066 aa23.57■■□□□ 1.36
CACNA1B-201ENST00000277549 CHRNA2Q15822 529 aa23.57■■□□□ 1.36
CACNA1B-201ENST00000277549 SP4Q02446 784 aa23.57■■□□□ 1.36
CACNA1B-201ENST00000277549 EIF3JO75822 258 aaKnown RBP23.57■■□□□ 1.36
CACNA1B-201ENST00000277549 SRRTQ9BXP5 876 aaKnown RBP23.57■■□□□ 1.36
CACNA1B-201ENST00000277549 SMTNL1A8MU46 457 aa23.56■■□□□ 1.36
CACNA1B-201ENST00000277549 BIN1O00499 593 aa23.56■■□□□ 1.36
CACNA1B-201ENST00000277549 CBX1P83916 185 aa23.56■■□□□ 1.36
CACNA1B-201ENST00000277549 EP400NLQ6ZTU2 488 aa23.56■■□□□ 1.36
CACNA1B-201ENST00000277549 IQCA1Q86XH1 822 aa23.56■■□□□ 1.36
CACNA1B-201ENST00000277549 TSPY2A6NKD2 308 aa23.56■■□□□ 1.36
CACNA1B-201ENST00000277549 CEBPAP49715 358 aaPredicted RBP23.56■■□□□ 1.36
CACNA1B-201ENST00000277549 CCDC40Q4G0X9 1142 aa23.56■■□□□ 1.36
CACNA1B-201ENST00000277549 NUDT16Q96DE0 195 aaKnown RBP23.56■■□□□ 1.36
CACNA1B-201ENST00000277549 SCAPERQ9BY12 1400 aa23.56■■□□□ 1.36
CACNA1B-201ENST00000277549 NOP2P46087 812 aaKnown RBP23.54■■□□□ 1.36
CACNA1B-201ENST00000277549 CATIPQ7Z7H3 387 aa23.54■■□□□ 1.36
CACNA1B-201ENST00000277549 MTIF2P46199 727 aaKnown RBP23.54■■□□□ 1.36
CACNA1B-201ENST00000277549 KAT14Q9H8E8 782 aa23.54■■□□□ 1.36
CACNA1B-201ENST00000277549 LRSAM1Q6UWE0 723 aa23.54■■□□□ 1.36
CACNA1B-201ENST00000277549 ZFP91Q96JP5 570 aaPredicted RBP23.54■■□□□ 1.36
CACNA1B-201ENST00000277549 MYOM3Q5VTT5 1437 aa23.54■■□□□ 1.36
CACNA1B-201ENST00000277549 TMEM110-MUSTN1A8MSY1 372 aa23.53■■□□□ 1.36
CACNA1B-201ENST00000277549 RUSC2Q8N2Y8 1516 aa23.53■■□□□ 1.36
CACNA1B-201ENST00000277549 UQCRHLA0A096LP55 91 aa23.53■■□□□ 1.36
CACNA1B-201ENST00000277549 RIMBP2O15034 1052 aa23.53■■□□□ 1.36
CACNA1B-201ENST00000277549 UQCRHP07919 91 aa23.53■■□□□ 1.36
CACNA1B-201ENST00000277549 TAF7Q15545 349 aaPredicted RBP23.53■■□□□ 1.36
CACNA1B-201ENST00000277549 JAG2Q9Y219 1238 aa23.53■■□□□ 1.36
CACNA1B-201ENST00000277549 U3KPZ7 1027 aaPredicted RBP23.53■■□□□ 1.36
CACNA1B-201ENST00000277549 SYCE3A1L190 88 aa23.53■■□□□ 1.36
CACNA1B-201ENST00000277549 TAF12Q16514 161 aa23.53■■□□□ 1.36
CACNA1B-201ENST00000277549 C8orf76Q96K31 380 aa23.53■■□□□ 1.36
CACNA1B-201ENST00000277549 TMCO3Q6UWJ1 677 aa23.53■■□□□ 1.36
CACNA1B-201ENST00000277549 RFX1P22670 979 aa23.52■■□□□ 1.36
CACNA1B-201ENST00000277549 RNF187Q5TA31 235 aaPredicted RBP23.52■■□□□ 1.36
CACNA1B-201ENST00000277549 GOLIM4O00461 696 aa23.52■■□□□ 1.36
CACNA1B-201ENST00000277549 SLF2Q8IX21 1173 aa23.52■■□□□ 1.36
CACNA1B-201ENST00000277549 ANKRD50Q9ULJ7 1429 aa23.51■■□□□ 1.35
CACNA1B-201ENST00000277549 NBPF6Q5VWK0 638 aa23.51■■□□□ 1.35
CACNA1B-201ENST00000277549 NBPF5PQ86XG9 351 aaPredicted RBP23.51■■□□□ 1.35
CACNA1B-201ENST00000277549 NBPF4Q96M43 638 aa23.51■■□□□ 1.35
CACNA1B-201ENST00000277549 HLA-DOAP06340 250 aa23.51■■□□□ 1.35
CACNA1B-201ENST00000277549 VPS36Q86VN1 386 aa23.51■■□□□ 1.35
CACNA1B-201ENST00000277549 CCDC66A2RUB6 948 aa23.51■■□□□ 1.35
CACNA1B-201ENST00000277549 TSNARE1Q96NA8 513 aa23.51■■□□□ 1.35
CACNA1B-201ENST00000277549 GJA3Q9Y6H8 435 aa23.51■■□□□ 1.35
CACNA1B-201ENST00000277549 FERP16591 822 aa23.51■■□□□ 1.35
CACNA1B-201ENST00000277549 ERBINQ96RT1 1412 aa23.51■■□□□ 1.35
CACNA1B-201ENST00000277549 PHACTR2O75167 634 aa23.5■■□□□ 1.35
CACNA1B-201ENST00000277549 TMEM57Q8N5G2 664 aa23.5■■□□□ 1.35
CACNA1B-201ENST00000277549 TRMT1Q9NXH9 659 aaKnown RBP23.5■■□□□ 1.35
CACNA1B-201ENST00000277549 GAPVD1Q14C86 1478 aa23.5■■□□□ 1.35
CACNA1B-201ENST00000277549 GIMAP7Q8NHV1 300 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms