RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 DNM1Q05193 864 aaKnown RBP22.45■■□□□ 1.18
SSC4D-201ENST00000275560 RTF1Q92541 710 aaKnown RBP22.45■■□□□ 1.18
SSC4D-201ENST00000275560 STK31Q9BXU1 1019 aa22.45■■□□□ 1.18
SSC4D-201ENST00000275560 STAP2Q9UGK3 403 aa22.44■■□□□ 1.18
SSC4D-201ENST00000275560 KIF3AQ9Y496 699 aa22.44■■□□□ 1.18
SSC4D-201ENST00000275560 HMGN5P82970 282 aaKnown RBP22.44■■□□□ 1.18
SSC4D-201ENST00000275560 UBE2HP62256 183 aa22.44■■□□□ 1.18
SSC4D-201ENST00000275560 TMEM87AQ8NBN3 555 aa22.44■■□□□ 1.18
SSC4D-201ENST00000275560 F13A1P00488 732 aa22.43■■□□□ 1.18
SSC4D-201ENST00000275560 CWC27Q6UX04 472 aaKnown RBP22.43■■□□□ 1.18
SSC4D-201ENST00000275560 CCDC83Q8IWF9 413 aa22.43■■□□□ 1.18
SSC4D-201ENST00000275560 SPTLC3Q9NUV7 552 aa22.43■■□□□ 1.18
SSC4D-201ENST00000275560 TTC14Q96N46 770 aa22.42■■□□□ 1.18
SSC4D-201ENST00000275560 DLC1Q96QB1 1528 aa22.42■■□□□ 1.18
SSC4D-201ENST00000275560 GNAI3P08754 354 aa22.42■■□□□ 1.18
SSC4D-201ENST00000275560 SMC3Q9UQE7 1217 aa22.42■■□□□ 1.18
SSC4D-201ENST00000275560 SSH2Q76I76 1423 aa22.42■■□□□ 1.18
SSC4D-201ENST00000275560 PLEKHG5O94827 1062 aa22.41■■□□□ 1.18
SSC4D-201ENST00000275560 FUCA2Q9BTY2 467 aa22.41■■□□□ 1.18
SSC4D-201ENST00000275560 RIOK3O14730 519 aaKnown RBP22.41■■□□□ 1.18
SSC4D-201ENST00000275560 SURF6O75683 361 aaKnown RBP22.41■■□□□ 1.18
SSC4D-201ENST00000275560 GTF2F1P35269 517 aaKnown RBP eCLIP22.41■■□□□ 1.18
SSC4D-201ENST00000275560 USP44Q9H0E7 712 aa22.41■■□□□ 1.18
SSC4D-201ENST00000275560 DMTNQ08495 405 aa22.4■■□□□ 1.18
SSC4D-201ENST00000275560 TTC21BQ7Z4L5 1316 aa22.4■■□□□ 1.18
SSC4D-201ENST00000275560 RAD50Q92878 1312 aa22.4■■□□□ 1.18
SSC4D-201ENST00000275560 CASTP20810 708 aaKnown RBP22.4■■□□□ 1.18
SSC4D-201ENST00000275560 MLECQ14165 292 aa22.4■■□□□ 1.18
SSC4D-201ENST00000275560 MON2Q7Z3U7 1717 aa22.4■■□□□ 1.18
SSC4D-201ENST00000275560 SGSM2O43147 1006 aa22.39■■□□□ 1.18
SSC4D-201ENST00000275560 BCL11BQ9C0K0 894 aaPredicted RBP22.39■■□□□ 1.18
SSC4D-201ENST00000275560 C3P01024 1663 aa22.39■■□□□ 1.18
SSC4D-201ENST00000275560 PEAK1Q9H792 1746 aa22.39■■□□□ 1.17
SSC4D-201ENST00000275560 IGSF3O75054 1194 aa22.39■■□□□ 1.17
SSC4D-201ENST00000275560 GJB2P29033 226 aa22.39■■□□□ 1.17
SSC4D-201ENST00000275560 KIAA1524Q8TCG1 905 aa22.39■■□□□ 1.17
SSC4D-201ENST00000275560 PI4K2BQ8TCG2 481 aa22.39■■□□□ 1.17
SSC4D-201ENST00000275560 LSG1Q9H089 658 aaKnown RBP22.39■■□□□ 1.17
SSC4D-201ENST00000275560 LIMCH1Q9UPQ0 1083 aa22.39■■□□□ 1.17
SSC4D-201ENST00000275560 VPS37CA5D8V6 355 aaPredicted RBP22.39■■□□□ 1.17
SSC4D-201ENST00000275560 FAM173BQ6P4H8 233 aa22.39■■□□□ 1.17
SSC4D-201ENST00000275560 NRKQ7Z2Y5 1582 aa22.39■■□□□ 1.17
SSC4D-201ENST00000275560 CAMK4Q16566 473 aa22.38■■□□□ 1.17
SSC4D-201ENST00000275560 UBTFL1P0CB47 393 aaPredicted RBP22.38■■□□□ 1.17
SSC4D-201ENST00000275560 ADCK5Q3MIX3 580 aa22.38■■□□□ 1.17
SSC4D-201ENST00000275560 PPP1R42Q7Z4L9 355 aa22.38■■□□□ 1.17
SSC4D-201ENST00000275560 IL17RAQ96F46 866 aa22.38■■□□□ 1.17
SSC4D-201ENST00000275560 A2ML1A8K2U0 1454 aa22.37■■□□□ 1.17
SSC4D-201ENST00000275560 COL9A3Q14050 684 aaPredicted RBP22.37■■□□□ 1.17
SSC4D-201ENST00000275560 PHAXQ9H814 394 aaKnown RBP22.37■■□□□ 1.17
SSC4D-201ENST00000275560 ACEP12821 1306 aa22.37■■□□□ 1.17
SSC4D-201ENST00000275560 SETD1AO15047 1707 aaKnown RBP22.37■■□□□ 1.17
SSC4D-201ENST00000275560 U2AF2P26368 475 aaKnown RBP eCLIP22.37■■□□□ 1.17
SSC4D-201ENST00000275560 NECAB1Q8N987 351 aa22.37■■□□□ 1.17
SSC4D-201ENST00000275560 SOS1Q07889 1333 aaPredicted RBP22.37■■□□□ 1.17
SSC4D-201ENST00000275560 FERMT3Q86UX7 667 aa22.36■■□□□ 1.17
SSC4D-201ENST00000275560 MTMR6Q9Y217 621 aa22.36■■□□□ 1.17
SSC4D-201ENST00000275560 LETM1O95202 739 aaPredicted RBP22.35■■□□□ 1.17
SSC4D-201ENST00000275560 PTGS1P23219 599 aa22.35■■□□□ 1.17
SSC4D-201ENST00000275560 PTH1RQ03431 593 aa22.35■■□□□ 1.17
SSC4D-201ENST00000275560 RHPN1Q8TCX5 695 aa22.35■■□□□ 1.17
SSC4D-201ENST00000275560 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.35■■□□□ 1.17
SSC4D-201ENST00000275560 RICTORQ6R327 1708 aa22.35■■□□□ 1.17
SSC4D-201ENST00000275560 CCDC30Q5VVM6 783 aa22.35■■□□□ 1.17
SSC4D-201ENST00000275560 PDCL2Q8N4E4 241 aa22.35■■□□□ 1.17
SSC4D-201ENST00000275560 HYPKQ9NX55 129 aa22.34■■□□□ 1.17
SSC4D-201ENST00000275560 ST3GAL1Q11201 340 aa22.34■■□□□ 1.17
SSC4D-201ENST00000275560 LUZP1Q86V48 1076 aa22.34■■□□□ 1.17
SSC4D-201ENST00000275560 NEO1Q92859 1461 aa22.34■■□□□ 1.17
SSC4D-201ENST00000275560 LRMPQ12912 555 aa22.33■■□□□ 1.17
SSC4D-201ENST00000275560 JAKMIP1Q96N16 626 aaKnown RBP22.33■■□□□ 1.17
SSC4D-201ENST00000275560 ITSN1Q15811 1721 aa22.33■■□□□ 1.17
SSC4D-201ENST00000275560 SRGAP3O43295 1099 aa22.33■■□□□ 1.16
SSC4D-201ENST00000275560 PRPF40BQ6NWY9 871 aaKnown RBP22.33■■□□□ 1.16
SSC4D-201ENST00000275560 CKAP2LQ8IYA6 745 aa22.32■■□□□ 1.16
SSC4D-201ENST00000275560 SSH3Q8TE77 659 aa22.32■■□□□ 1.16
SSC4D-201ENST00000275560 EYA1Q99502 592 aa22.32■■□□□ 1.16
SSC4D-201ENST00000275560 AKAP12Q02952 1782 aa22.32■■□□□ 1.16
SSC4D-201ENST00000275560 LIG1P18858 919 aa22.32■■□□□ 1.16
SSC4D-201ENST00000275560 XRN1Q8IZH2 1706 aaKnown RBP22.32■■□□□ 1.16
SSC4D-201ENST00000275560 NBPF7P0C2Y1 421 aaPredicted RBP22.31■■□□□ 1.16
SSC4D-201ENST00000275560 NRBP1Q9UHY1 535 aa22.31■■□□□ 1.16
SSC4D-201ENST00000275560 TCEANC2Q96MN5 208 aa22.3■■□□□ 1.16
SSC4D-201ENST00000275560 NAA30Q147X3 362 aaPredicted RBP22.3■■□□□ 1.16
SSC4D-201ENST00000275560 TTC6Q86TZ1 520 aa22.3■■□□□ 1.16
SSC4D-201ENST00000275560 PDRG1Q9NUG6 133 aa22.3■■□□□ 1.16
SSC4D-201ENST00000275560 OVOS2A0A0J9YW53 1432 aa22.3■■□□□ 1.16
SSC4D-201ENST00000275560 OVOS2Q6IE36 1432 aa22.3■■□□□ 1.16
SSC4D-201ENST00000275560 ME3Q16798 604 aa22.3■■□□□ 1.16
SSC4D-201ENST00000275560 UTP14CQ5TAP6 766 aaKnown RBP22.3■■□□□ 1.16
SSC4D-201ENST00000275560 CNTROBQ8N137 903 aa22.3■■□□□ 1.16
SSC4D-201ENST00000275560 C16orf45Q96MC5 204 aaPredicted RBP22.29■■□□□ 1.16
SSC4D-201ENST00000275560 ATP6V1DQ9Y5K8 247 aa22.29■■□□□ 1.16
SSC4D-201ENST00000275560 AOX1Q06278 1338 aa22.29■■□□□ 1.16
SSC4D-201ENST00000275560 RGPD1P0DJD0 1748 aa22.29■■□□□ 1.16
SSC4D-201ENST00000275560 CEP170BQ9Y4F5 1589 aaPredicted RBP22.29■■□□□ 1.16
SSC4D-201ENST00000275560 EIF2S2P20042 333 aaKnown RBP22.29■■□□□ 1.16
SSC4D-201ENST00000275560 CHAF1AQ13111 956 aaPredicted RBP22.29■■□□□ 1.16
SSC4D-201ENST00000275560 NRXN3Q9Y4C0 1643 aa22.28■■□□□ 1.16
SSC4D-201ENST00000275560 CCDC192P0DO97 292 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms